RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 RUSC2Q8N2Y8 1516 aa44.7■■■■■ 4.75
HLA-F-227ENST00000485513 CUL7Q14999 1698 aa44.65■■■■■ 4.74
HLA-F-227ENST00000485513 KIAA0586Q9BVV6 1533 aa44.51■■■■■ 4.72
HLA-F-227ENST00000485513 CARMIL1Q5VZK9 1371 aa44.44■■■■■ 4.71
HLA-F-227ENST00000485513 NPM1P06748 294 aaKnown RBP eCLIP44.2■■■■■ 4.67
HLA-F-227ENST00000485513 ADCY10Q96PN6 1610 aa44.18■■■■■ 4.66
HLA-F-227ENST00000485513 KIF13AQ9H1H9 1805 aa44.17■■■■■ 4.66
HLA-F-227ENST00000485513 IQGAP2Q13576 1575 aa44.13■■■■■ 4.65
HLA-F-227ENST00000485513 MAPKBP1O60336 1514 aa44.09■■■■■ 4.65
HLA-F-227ENST00000485513 CARMIL2Q6F5E8 1435 aa44.07■■■■■ 4.65
HLA-F-227ENST00000485513 RAPGEF2Q9Y4G8 1499 aa44.07■■■■■ 4.65
HLA-F-227ENST00000485513 PTPRGP23470 1445 aa44.07■■■■■ 4.64
HLA-F-227ENST00000485513 ABCC10Q5T3U5 1492 aa44.02■■■■■ 4.64
HLA-F-227ENST00000485513 TNIKQ9UKE5 1360 aa44■■■■■ 4.63
HLA-F-227ENST00000485513 FAM69CQ0P6D2 419 aa43.98■■■■■ 4.63
HLA-F-227ENST00000485513 TTBK1Q5TCY1 1321 aaPredicted RBP43.98■■■■■ 4.63
HLA-F-227ENST00000485513 DIP2BQ9P265 1576 aa43.92■■■■■ 4.62
HLA-F-227ENST00000485513 DISP1Q96F81 1524 aa43.88■■■■■ 4.61
HLA-F-227ENST00000485513 UGGT2Q9NYU1 1516 aa43.84■■■■■ 4.61
HLA-F-227ENST00000485513 ABCC2Q92887 1545 aa43.79■■■■■ 4.6
HLA-F-227ENST00000485513 UHRF1BP1LA0JNW5 1464 aa43.74■■■■■ 4.59
HLA-F-227ENST00000485513 UACAQ9BZF9 1416 aa43.73■■■■■ 4.59
HLA-F-227ENST00000485513 KIAA0556O60303 1618 aa43.71■■■■■ 4.59
HLA-F-227ENST00000485513 CTTNBP2Q8WZ74 1663 aa43.71■■■■■ 4.59
HLA-F-227ENST00000485513 PRXQ9BXM0 1461 aa43.66■■■■■ 4.58
HLA-F-227ENST00000485513 AEBP2Q6ZN18 517 aaPredicted RBP43.65■■■■■ 4.58
HLA-F-227ENST00000485513 ASXL2Q76L83 1435 aa43.63■■■■■ 4.57
HLA-F-227ENST00000485513 TSPOAP1O95153 1857 aa43.62■■■■■ 4.57
HLA-F-227ENST00000485513 PLB1Q6P1J6 1458 aa43.61■■■■■ 4.57
HLA-F-227ENST00000485513 KDM5BQ9UGL1 1544 aa43.54■■■■■ 4.56
HLA-F-227ENST00000485513 GOLGA3Q08378 1498 aa43.52■■■■■ 4.56
HLA-F-227ENST00000485513 KDM6BO15054 1643 aa43.49■■■■■ 4.55
HLA-F-227ENST00000485513 GLI2P10070 1586 aa43.47■■■■■ 4.55
HLA-F-227ENST00000485513 ZCCHC11Q5TAX3 1644 aaKnown RBP43.46■■■■■ 4.55
HLA-F-227ENST00000485513 CSRNP3Q8WYN3 585 aa43.39■■■■■ 4.54
HLA-F-227ENST00000485513 EPRSP07814 1512 aaKnown RBP43.36■■■■■ 4.53
HLA-F-227ENST00000485513 PPRC1Q5VV67 1664 aaKnown RBP43.33■■■■■ 4.53
HLA-F-227ENST00000485513 ABCA8O94911 1581 aa43.3■■■■■ 4.52
HLA-F-227ENST00000485513 EEA1Q15075 1411 aa43.25■■■■■ 4.51
HLA-F-227ENST00000485513 MAP3K4Q9Y6R4 1608 aa43.24■■■■■ 4.51
HLA-F-227ENST00000485513 WDR7Q9Y4E6 1490 aa43.24■■■■■ 4.51
HLA-F-227ENST00000485513 P3H3Q8IVL6 736 aa43.16■■■■■ 4.5
HLA-F-227ENST00000485513 FAM9AQ8IZU1 332 aaPredicted RBP43.15■■■■■ 4.5
HLA-F-227ENST00000485513 TEX14Q8IWB6 1497 aa43.13■■■■■ 4.49
HLA-F-227ENST00000485513 SAMD9Q5K651 1589 aa43.08■■■■■ 4.49
HLA-F-227ENST00000485513 KCNH8Q96L42 1107 aa43.02■■■■■ 4.48
HLA-F-227ENST00000485513 COL17A1Q9UMD9 1497 aaPredicted RBP43.01■■■■■ 4.48
HLA-F-227ENST00000485513 CFAP43Q8NDM7 1665 aa42.97■■■■■ 4.47
HLA-F-227ENST00000485513 CD109Q6YHK3 1445 aa42.96■■■■■ 4.47
HLA-F-227ENST00000485513 ARID3CA6NKF2 412 aa42.95■■■■■ 4.47
HLA-F-227ENST00000485513 ATP10BO94823 1461 aa42.94■■■■■ 4.47
HLA-F-227ENST00000485513 KDM4FA0A1W2PPD8 638 aa42.93■■■■■ 4.46
HLA-F-227ENST00000485513 MAGI3Q5TCQ9 1506 aa42.91■■■■■ 4.46
HLA-F-227ENST00000485513 RANGAP1P46060 587 aaPredicted RBP42.9■■■■■ 4.46
HLA-F-227ENST00000485513 KIF21BO75037 1637 aa42.89■■■■■ 4.46
HLA-F-227ENST00000485513 RAPGEF6Q8TEU7 1601 aa42.89■■■■■ 4.46
HLA-F-227ENST00000485513 FHOD3Q2V2M9 1422 aa42.8■■■■■ 4.44
HLA-F-227ENST00000485513 CHIC1Q5VXU3 224 aa42.77■■■■■ 4.44
HLA-F-227ENST00000485513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.72■■■■■ 4.43
HLA-F-227ENST00000485513 HNRNPUL2Q1KMD3 747 aaKnown RBP42.72■■■■■ 4.43
HLA-F-227ENST00000485513 NUP153P49790 1475 aaKnown RBP42.72■■■■■ 4.43
HLA-F-227ENST00000485513 EFCAB5A4FU69 1503 aa42.71■■■■■ 4.43
HLA-F-227ENST00000485513 ABCA9Q8IUA7 1624 aa42.68■■■■■ 4.42
HLA-F-227ENST00000485513 ADGRL1O94910 1474 aa42.67■■■■■ 4.42
HLA-F-227ENST00000485513 EHMT2Q96KQ7 1210 aa42.59■■■■■ 4.41
HLA-F-227ENST00000485513 UBTFP17480 764 aaKnown RBP42.58■■■■■ 4.41
HLA-F-227ENST00000485513 ARAP3Q8WWN8 1544 aa42.56■■■■■ 4.4
HLA-F-227ENST00000485513 PHLDB1Q86UU1 1377 aa42.52■■■■■ 4.4
HLA-F-227ENST00000485513 PLEKHD1A6NEE1 506 aa42.49■■■■■ 4.39
HLA-F-227ENST00000485513 NEO1Q92859 1461 aa42.44■■■■■ 4.38
HLA-F-227ENST00000485513 ARHGAP35Q9NRY4 1499 aa42.35■■■■■ 4.37
HLA-F-227ENST00000485513 CDK13Q14004 1512 aaKnown RBP42.33■■■■■ 4.37
HLA-F-227ENST00000485513 FMN1Q68DA7 1419 aa42.33■■■■■ 4.37
HLA-F-227ENST00000485513 RAPGEF3O95398 923 aa42.32■■■■■ 4.37
HLA-F-227ENST00000485513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.29■■■■■ 4.36
HLA-F-227ENST00000485513 HECW1Q76N89 1606 aa42.25■■■■■ 4.35
HLA-F-227ENST00000485513 ATP1B4Q9UN42 357 aaPredicted RBP42.25■■■■■ 4.35
HLA-F-227ENST00000485513 TTC37Q6PGP7 1564 aa42.23■■■■■ 4.35
HLA-F-227ENST00000485513 FRMPD1Q5SYB0 1578 aa42.22■■■■■ 4.35
HLA-F-227ENST00000485513 FANCAO15360 1455 aa42.2■■■■■ 4.35
HLA-F-227ENST00000485513 CFAP74Q9C0B2 1584 aa42.19■■■■■ 4.34
HLA-F-227ENST00000485513 AKNAQ7Z591 1439 aa42.18■■■■■ 4.34
HLA-F-227ENST00000485513 DENND4BO75064 1496 aaPredicted RBP42.15■■■■■ 4.34
HLA-F-227ENST00000485513 RICTORQ6R327 1708 aa42.09■■■■■ 4.33
HLA-F-227ENST00000485513 CDK11AQ9UQ88 783 aaPredicted RBP42.09■■■■■ 4.33
HLA-F-227ENST00000485513 PLCH2O75038 1416 aa42.03■■■■■ 4.32
HLA-F-227ENST00000485513 HECW2Q9P2P5 1572 aa42.01■■■■■ 4.32
HLA-F-227ENST00000485513 ARHGEF40Q8TER5 1519 aa42■■■■■ 4.31
HLA-F-227ENST00000485513 ADAMTSL3P82987 1691 aa41.99■■■■■ 4.31
HLA-F-227ENST00000485513 LRRIQ1Q96JM4 1722 aa41.98■■■■■ 4.31
HLA-F-227ENST00000485513 ARID4BQ4LE39 1312 aaPredicted RBP41.96■■■■■ 4.31
HLA-F-227ENST00000485513 TROQ12816 1431 aaPredicted RBP41.96■■■■■ 4.31
HLA-F-227ENST00000485513 MYO5CQ9NQX4 1742 aa41.95■■■■■ 4.31
HLA-F-227ENST00000485513 KIF14Q15058 1648 aa41.95■■■■■ 4.31
HLA-F-227ENST00000485513 ZMYM4Q5VZL5 1548 aa41.94■■■■■ 4.3
HLA-F-227ENST00000485513 BCORL1Q5H9F3 1711 aa41.93■■■■■ 4.3
HLA-F-227ENST00000485513 CLIP1P30622 1438 aa41.91■■■■■ 4.3
HLA-F-227ENST00000485513 SCAPERQ9BY12 1400 aa41.9■■■■■ 4.3
HLA-F-227ENST00000485513 CASKIN1Q8WXD9 1431 aa41.89■■■■■ 4.3
HLA-F-227ENST00000485513 PCF11O94913 1555 aaKnown RBP41.88■■■■■ 4.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms