RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 EFCAB5A4FU69 1503 aa20.49■□□□□ 0.87
SFMBT1-206ENST00000485494 CLIP1P30622 1438 aa20.49■□□□□ 0.87
SFMBT1-206ENST00000485494 IQGAP2Q13576 1575 aa20.43■□□□□ 0.86
SFMBT1-206ENST00000485494 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
SFMBT1-206ENST00000485494 KIAA0586Q9BVV6 1533 aa20.42■□□□□ 0.86
SFMBT1-206ENST00000485494 CHD1O14646 1710 aa20.41■□□□□ 0.86
SFMBT1-206ENST00000485494 NUP160Q12769 1436 aa20.39■□□□□ 0.85
SFMBT1-206ENST00000485494 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
SFMBT1-206ENST00000485494 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
SFMBT1-206ENST00000485494 UGGT2Q9NYU1 1516 aa20.36■□□□□ 0.85
SFMBT1-206ENST00000485494 ARHGAP35Q9NRY4 1499 aa20.35■□□□□ 0.85
SFMBT1-206ENST00000485494 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
SFMBT1-206ENST00000485494 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
SFMBT1-206ENST00000485494 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
SFMBT1-206ENST00000485494 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
SFMBT1-206ENST00000485494 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
SFMBT1-206ENST00000485494 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
SFMBT1-206ENST00000485494 FMN1Q68DA7 1419 aa20.25■□□□□ 0.83
SFMBT1-206ENST00000485494 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
SFMBT1-206ENST00000485494 KIAA0556O60303 1618 aa20.21■□□□□ 0.83
SFMBT1-206ENST00000485494 FBLN2P98095 1184 aa20.21■□□□□ 0.83
SFMBT1-206ENST00000485494 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
SFMBT1-206ENST00000485494 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
SFMBT1-206ENST00000485494 CARMIL2Q6F5E8 1435 aa20.19■□□□□ 0.82
SFMBT1-206ENST00000485494 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
SFMBT1-206ENST00000485494 FYCO1Q9BQS8 1478 aa20.16■□□□□ 0.82
SFMBT1-206ENST00000485494 DISP1Q96F81 1524 aa20.15■□□□□ 0.82
SFMBT1-206ENST00000485494 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
SFMBT1-206ENST00000485494 CASKIN1Q8WXD9 1431 aa20.13■□□□□ 0.81
SFMBT1-206ENST00000485494 JPH4Q96JJ6 628 aa20.12■□□□□ 0.81
SFMBT1-206ENST00000485494 APLP2Q06481 763 aa20.11■□□□□ 0.81
SFMBT1-206ENST00000485494 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
SFMBT1-206ENST00000485494 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
SFMBT1-206ENST00000485494 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
SFMBT1-206ENST00000485494 CFAP43Q8NDM7 1665 aa20.09■□□□□ 0.81
SFMBT1-206ENST00000485494 PCF11O94913 1555 aaKnown RBP20.08■□□□□ 0.8
SFMBT1-206ENST00000485494 HECW1Q76N89 1606 aa20.07■□□□□ 0.8
SFMBT1-206ENST00000485494 CCDC18Q5T9S5 1454 aa20.04■□□□□ 0.8
SFMBT1-206ENST00000485494 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
SFMBT1-206ENST00000485494 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.79
SFMBT1-206ENST00000485494 PRG4Q92954 1404 aaPredicted RBP20.01■□□□□ 0.79
SFMBT1-206ENST00000485494 LRRIQ1Q96JM4 1722 aa19.97■□□□□ 0.79
SFMBT1-206ENST00000485494 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
SFMBT1-206ENST00000485494 ABCA8O94911 1581 aa19.94■□□□□ 0.78
SFMBT1-206ENST00000485494 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
SFMBT1-206ENST00000485494 PTPRGP23470 1445 aa19.9■□□□□ 0.78
SFMBT1-206ENST00000485494 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
SFMBT1-206ENST00000485494 EPRSP07814 1512 aaKnown RBP19.9■□□□□ 0.78
SFMBT1-206ENST00000485494 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
SFMBT1-206ENST00000485494 EHBP1L1Q8N3D4 1523 aa19.86■□□□□ 0.77
SFMBT1-206ENST00000485494 NUP153P49790 1475 aaKnown RBP19.86■□□□□ 0.77
SFMBT1-206ENST00000485494 UHRF1BP1LA0JNW5 1464 aa19.85■□□□□ 0.77
SFMBT1-206ENST00000485494 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
SFMBT1-206ENST00000485494 CDK11AQ9UQ88 783 aaPredicted RBP19.82■□□□□ 0.76
SFMBT1-206ENST00000485494 UACAQ9BZF9 1416 aa19.82■□□□□ 0.76
SFMBT1-206ENST00000485494 ABCC2Q92887 1545 aa19.81■□□□□ 0.76
SFMBT1-206ENST00000485494 PLB1Q6P1J6 1458 aa19.8■□□□□ 0.76
SFMBT1-206ENST00000485494 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
SFMBT1-206ENST00000485494 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
SFMBT1-206ENST00000485494 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
SFMBT1-206ENST00000485494 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.76
SFMBT1-206ENST00000485494 ATP1B4Q9UN42 357 aaPredicted RBP19.77■□□□□ 0.76
SFMBT1-206ENST00000485494 KANK4Q5T7N3 995 aaPredicted RBP19.74■□□□□ 0.75
SFMBT1-206ENST00000485494 CDK13Q14004 1512 aaKnown RBP19.72■□□□□ 0.75
SFMBT1-206ENST00000485494 RRBP1Q9P2E9 1410 aaKnown RBP19.72■□□□□ 0.75
SFMBT1-206ENST00000485494 ATP10BO94823 1461 aa19.71■□□□□ 0.75
SFMBT1-206ENST00000485494 KDM5BQ9UGL1 1544 aa19.71■□□□□ 0.75
SFMBT1-206ENST00000485494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
SFMBT1-206ENST00000485494 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
SFMBT1-206ENST00000485494 MAGI3Q5TCQ9 1506 aa19.68■□□□□ 0.74
SFMBT1-206ENST00000485494 ITSN2Q9NZM3 1697 aa19.68■□□□□ 0.74
SFMBT1-206ENST00000485494 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
SFMBT1-206ENST00000485494 ZCCHC11Q5TAX3 1644 aaKnown RBP19.66■□□□□ 0.74
SFMBT1-206ENST00000485494 KIF14Q15058 1648 aa19.65■□□□□ 0.74
SFMBT1-206ENST00000485494 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
SFMBT1-206ENST00000485494 PLEKHD1A6NEE1 506 aa19.64■□□□□ 0.73
SFMBT1-206ENST00000485494 MYOM3Q5VTT5 1437 aa19.62■□□□□ 0.73
SFMBT1-206ENST00000485494 MIA2Q96PC5 1412 aa19.62■□□□□ 0.73
SFMBT1-206ENST00000485494 PCGF6Q9BYE7 350 aa19.62■□□□□ 0.73
SFMBT1-206ENST00000485494 CCNB3Q8WWL7 1395 aa19.61■□□□□ 0.73
SFMBT1-206ENST00000485494 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
SFMBT1-206ENST00000485494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
SFMBT1-206ENST00000485494 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
SFMBT1-206ENST00000485494 PHLDB1Q86UU1 1377 aa19.58■□□□□ 0.73
SFMBT1-206ENST00000485494 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
SFMBT1-206ENST00000485494 CDC42BPAQ5VT25 1732 aa19.55■□□□□ 0.72
SFMBT1-206ENST00000485494 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
SFMBT1-206ENST00000485494 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
SFMBT1-206ENST00000485494 MYO5CQ9NQX4 1742 aa19.53■□□□□ 0.72
SFMBT1-206ENST00000485494 ABCC10Q5T3U5 1492 aa19.52■□□□□ 0.72
SFMBT1-206ENST00000485494 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
SFMBT1-206ENST00000485494 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
SFMBT1-206ENST00000485494 ARAP3Q8WWN8 1544 aa19.5■□□□□ 0.71
SFMBT1-206ENST00000485494 WDR7Q9Y4E6 1490 aa19.48■□□□□ 0.71
SFMBT1-206ENST00000485494 MAPKBP1O60336 1514 aa19.47■□□□□ 0.71
SFMBT1-206ENST00000485494 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
SFMBT1-206ENST00000485494 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
SFMBT1-206ENST00000485494 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
SFMBT1-206ENST00000485494 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
SFMBT1-206ENST00000485494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms