RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
SIK3-211ENST00000485363 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
SIK3-211ENST00000485363 KIAA0586Q9BVV6 1533 aa27.33■■□□□ 1.97
SIK3-211ENST00000485363 CARMIL1Q5VZK9 1371 aa27.33■■□□□ 1.97
SIK3-211ENST00000485363 RAPGEF2Q9Y4G8 1499 aa27.12■■□□□ 1.93
SIK3-211ENST00000485363 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
SIK3-211ENST00000485363 NPM1P06748 294 aaKnown RBP eCLIP27.08■■□□□ 1.93
SIK3-211ENST00000485363 ADCY10Q96PN6 1610 aa27.07■■□□□ 1.92
SIK3-211ENST00000485363 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
SIK3-211ENST00000485363 PTPRGP23470 1445 aa27.03■■□□□ 1.92
SIK3-211ENST00000485363 KIF13AQ9H1H9 1805 aa27.02■■□□□ 1.92
SIK3-211ENST00000485363 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
SIK3-211ENST00000485363 MAPKBP1O60336 1514 aa27■■□□□ 1.91
SIK3-211ENST00000485363 TTBK1Q5TCY1 1321 aaPredicted RBP26.96■■□□□ 1.91
SIK3-211ENST00000485363 DISP1Q96F81 1524 aa26.95■■□□□ 1.9
SIK3-211ENST00000485363 UGGT2Q9NYU1 1516 aa26.94■■□□□ 1.9
SIK3-211ENST00000485363 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
SIK3-211ENST00000485363 CTTNBP2Q8WZ74 1663 aa26.91■■□□□ 1.9
SIK3-211ENST00000485363 FAM69CQ0P6D2 419 aa26.9■■□□□ 1.9
SIK3-211ENST00000485363 PRXQ9BXM0 1461 aa26.89■■□□□ 1.9
SIK3-211ENST00000485363 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
SIK3-211ENST00000485363 KIAA0556O60303 1618 aa26.86■■□□□ 1.89
SIK3-211ENST00000485363 ABCC2Q92887 1545 aa26.85■■□□□ 1.89
SIK3-211ENST00000485363 UACAQ9BZF9 1416 aa26.83■■□□□ 1.89
SIK3-211ENST00000485363 UHRF1BP1LA0JNW5 1464 aa26.83■■□□□ 1.89
SIK3-211ENST00000485363 GOLGA3Q08378 1498 aa26.77■■□□□ 1.88
SIK3-211ENST00000485363 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
SIK3-211ENST00000485363 PLB1Q6P1J6 1458 aa26.73■■□□□ 1.87
SIK3-211ENST00000485363 ASXL2Q76L83 1435 aa26.73■■□□□ 1.87
SIK3-211ENST00000485363 EEA1Q15075 1411 aa26.71■■□□□ 1.87
SIK3-211ENST00000485363 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.87
SIK3-211ENST00000485363 TSPOAP1O95153 1857 aa26.69■■□□□ 1.86
SIK3-211ENST00000485363 ZCCHC11Q5TAX3 1644 aaKnown RBP26.66■■□□□ 1.86
SIK3-211ENST00000485363 GLI2P10070 1586 aa26.63■■□□□ 1.85
SIK3-211ENST00000485363 ABCA8O94911 1581 aa26.58■■□□□ 1.85
SIK3-211ENST00000485363 KDM6BO15054 1643 aa26.58■■□□□ 1.85
SIK3-211ENST00000485363 EPRSP07814 1512 aaKnown RBP26.56■■□□□ 1.84
SIK3-211ENST00000485363 FAM9AQ8IZU1 332 aaPredicted RBP26.56■■□□□ 1.84
SIK3-211ENST00000485363 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
SIK3-211ENST00000485363 PPRC1Q5VV67 1664 aaKnown RBP26.52■■□□□ 1.84
SIK3-211ENST00000485363 P3H3Q8IVL6 736 aa26.52■■□□□ 1.84
SIK3-211ENST00000485363 WDR7Q9Y4E6 1490 aa26.52■■□□□ 1.84
SIK3-211ENST00000485363 SAMD9Q5K651 1589 aa26.51■■□□□ 1.83
SIK3-211ENST00000485363 MAP3K4Q9Y6R4 1608 aa26.5■■□□□ 1.83
SIK3-211ENST00000485363 KIF21BO75037 1637 aa26.47■■□□□ 1.83
SIK3-211ENST00000485363 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
SIK3-211ENST00000485363 TEX14Q8IWB6 1497 aa26.42■■□□□ 1.82
SIK3-211ENST00000485363 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
SIK3-211ENST00000485363 KCNH8Q96L42 1107 aa26.38■■□□□ 1.81
SIK3-211ENST00000485363 RAPGEF6Q8TEU7 1601 aa26.37■■□□□ 1.81
SIK3-211ENST00000485363 ATP10BO94823 1461 aa26.36■■□□□ 1.81
SIK3-211ENST00000485363 CFAP43Q8NDM7 1665 aa26.36■■□□□ 1.81
SIK3-211ENST00000485363 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
SIK3-211ENST00000485363 FHOD3Q2V2M9 1422 aa26.33■■□□□ 1.81
SIK3-211ENST00000485363 CD109Q6YHK3 1445 aa26.32■■□□□ 1.8
SIK3-211ENST00000485363 EFCAB5A4FU69 1503 aa26.31■■□□□ 1.8
SIK3-211ENST00000485363 MAGI3Q5TCQ9 1506 aa26.3■■□□□ 1.8
SIK3-211ENST00000485363 COL17A1Q9UMD9 1497 aaPredicted RBP26.3■■□□□ 1.8
SIK3-211ENST00000485363 UBTFP17480 764 aaKnown RBP26.27■■□□□ 1.8
SIK3-211ENST00000485363 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
SIK3-211ENST00000485363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.25■■□□□ 1.79
SIK3-211ENST00000485363 HNRNPUL2Q1KMD3 747 aaKnown RBP26.25■■□□□ 1.79
SIK3-211ENST00000485363 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
SIK3-211ENST00000485363 ABCA9Q8IUA7 1624 aa26.19■■□□□ 1.78
SIK3-211ENST00000485363 KDM4FA0A1W2PPD8 638 aa26.17■■□□□ 1.78
SIK3-211ENST00000485363 PLEKHD1A6NEE1 506 aa26.12■■□□□ 1.77
SIK3-211ENST00000485363 ARHGAP35Q9NRY4 1499 aa26.09■■□□□ 1.77
SIK3-211ENST00000485363 ARAP3Q8WWN8 1544 aa26.09■■□□□ 1.77
SIK3-211ENST00000485363 PHLDB1Q86UU1 1377 aa26.08■■□□□ 1.77
SIK3-211ENST00000485363 FMN1Q68DA7 1419 aa26.08■■□□□ 1.77
SIK3-211ENST00000485363 ADGRL1O94910 1474 aa26.04■■□□□ 1.76
SIK3-211ENST00000485363 NEO1Q92859 1461 aa26.04■■□□□ 1.76
SIK3-211ENST00000485363 CDK13Q14004 1512 aaKnown RBP26.02■■□□□ 1.76
SIK3-211ENST00000485363 HECW1Q76N89 1606 aa26.02■■□□□ 1.76
SIK3-211ENST00000485363 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
SIK3-211ENST00000485363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.97■■□□□ 1.75
SIK3-211ENST00000485363 TTC37Q6PGP7 1564 aa25.93■■□□□ 1.74
SIK3-211ENST00000485363 RAPGEF3O95398 923 aa25.92■■□□□ 1.74
SIK3-211ENST00000485363 CFAP74Q9C0B2 1584 aa25.91■■□□□ 1.74
SIK3-211ENST00000485363 CDK11AQ9UQ88 783 aaPredicted RBP25.91■■□□□ 1.74
SIK3-211ENST00000485363 FANCAO15360 1455 aa25.9■■□□□ 1.74
SIK3-211ENST00000485363 AKNAQ7Z591 1439 aa25.88■■□□□ 1.73
SIK3-211ENST00000485363 FRMPD1Q5SYB0 1578 aa25.87■■□□□ 1.73
SIK3-211ENST00000485363 DENND4BO75064 1496 aaPredicted RBP25.85■■□□□ 1.73
SIK3-211ENST00000485363 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.73
SIK3-211ENST00000485363 PLCH2O75038 1416 aa25.82■■□□□ 1.72
SIK3-211ENST00000485363 RICTORQ6R327 1708 aa25.82■■□□□ 1.72
SIK3-211ENST00000485363 KIF14Q15058 1648 aa25.81■■□□□ 1.72
SIK3-211ENST00000485363 TROQ12816 1431 aaPredicted RBP25.8■■□□□ 1.72
SIK3-211ENST00000485363 CASKIN1Q8WXD9 1431 aa25.8■■□□□ 1.72
SIK3-211ENST00000485363 PCF11O94913 1555 aaKnown RBP25.8■■□□□ 1.72
SIK3-211ENST00000485363 MYO5CQ9NQX4 1742 aa25.8■■□□□ 1.72
SIK3-211ENST00000485363 CLIP1P30622 1438 aa25.8■■□□□ 1.72
SIK3-211ENST00000485363 CCDC18Q5T9S5 1454 aa25.78■■□□□ 1.72
SIK3-211ENST00000485363 ARHGEF40Q8TER5 1519 aa25.73■■□□□ 1.71
SIK3-211ENST00000485363 FYCO1Q9BQS8 1478 aa25.73■■□□□ 1.71
SIK3-211ENST00000485363 EFCAB2Q5VUJ9 269 aa25.73■■□□□ 1.71
SIK3-211ENST00000485363 ZMYM4Q5VZL5 1548 aa25.72■■□□□ 1.71
SIK3-211ENST00000485363 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
SIK3-211ENST00000485363 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms