RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 JPH4Q96JJ6 628 aa32.16■■■□□ 2.74
SNX17-206ENST00000484886 RAPGEF2Q9Y4G8 1499 aa32.16■■■□□ 2.74
SNX17-206ENST00000484886 KIAA0586Q9BVV6 1533 aa32.16■■■□□ 2.74
SNX17-206ENST00000484886 PRG4Q92954 1404 aaPredicted RBP32.14■■■□□ 2.74
SNX17-206ENST00000484886 CHIC1Q5VXU3 224 aa32.09■■■□□ 2.73
SNX17-206ENST00000484886 IQGAP2Q13576 1575 aa32.01■■■□□ 2.71
SNX17-206ENST00000484886 EEA1Q15075 1411 aa31.99■■■□□ 2.71
SNX17-206ENST00000484886 CSRNP3Q8WYN3 585 aa31.98■■■□□ 2.71
SNX17-206ENST00000484886 PRXQ9BXM0 1461 aa31.97■■■□□ 2.71
SNX17-206ENST00000484886 FAM9AQ8IZU1 332 aaPredicted RBP31.96■■■□□ 2.71
SNX17-206ENST00000484886 CTTNBP2Q8WZ74 1663 aa31.89■■■□□ 2.7
SNX17-206ENST00000484886 CARMIL2Q6F5E8 1435 aa31.87■■■□□ 2.69
SNX17-206ENST00000484886 TTBK1Q5TCY1 1321 aaPredicted RBP31.81■■■□□ 2.68
SNX17-206ENST00000484886 TRHP20396 242 aaPredicted RBP31.78■■■□□ 2.68
SNX17-206ENST00000484886 UGGT2Q9NYU1 1516 aa31.78■■■□□ 2.68
SNX17-206ENST00000484886 TNIKQ9UKE5 1360 aa31.74■■■□□ 2.67
SNX17-206ENST00000484886 DISP1Q96F81 1524 aa31.74■■■□□ 2.67
SNX17-206ENST00000484886 PTPRGP23470 1445 aa31.74■■■□□ 2.67
SNX17-206ENST00000484886 KIAA0556O60303 1618 aa31.69■■■□□ 2.66
SNX17-206ENST00000484886 KIF21BO75037 1637 aa31.67■■■□□ 2.66
SNX17-206ENST00000484886 GOLGA3Q08378 1498 aa31.65■■■□□ 2.66
SNX17-206ENST00000484886 ADCY10Q96PN6 1610 aa31.64■■■□□ 2.66
SNX17-206ENST00000484886 NPM1P06748 294 aaKnown RBP eCLIP31.63■■■□□ 2.65
SNX17-206ENST00000484886 EHMT2Q96KQ7 1210 aa31.62■■■□□ 2.65
SNX17-206ENST00000484886 RANGAP1P46060 587 aaPredicted RBP31.53■■■□□ 2.64
SNX17-206ENST00000484886 UACAQ9BZF9 1416 aa31.51■■■□□ 2.64
SNX17-206ENST00000484886 UBTFP17480 764 aaKnown RBP31.49■■■□□ 2.63
SNX17-206ENST00000484886 P3H3Q8IVL6 736 aa31.49■■■□□ 2.63
SNX17-206ENST00000484886 ABCC2Q92887 1545 aa31.45■■■□□ 2.63
SNX17-206ENST00000484886 UHRF1BP1LA0JNW5 1464 aa31.45■■■□□ 2.62
SNX17-206ENST00000484886 MAPKBP1O60336 1514 aa31.43■■■□□ 2.62
SNX17-206ENST00000484886 SAMD9Q5K651 1589 aa31.43■■■□□ 2.62
SNX17-206ENST00000484886 PLB1Q6P1J6 1458 aa31.39■■■□□ 2.62
SNX17-206ENST00000484886 KIF13AQ9H1H9 1805 aa31.33■■■□□ 2.61
SNX17-206ENST00000484886 ABCA8O94911 1581 aa31.31■■■□□ 2.6
SNX17-206ENST00000484886 EFCAB5A4FU69 1503 aa31.3■■■□□ 2.6
SNX17-206ENST00000484886 KDM5BQ9UGL1 1544 aa31.3■■■□□ 2.6
SNX17-206ENST00000484886 ABCC10Q5T3U5 1492 aa31.3■■■□□ 2.6
SNX17-206ENST00000484886 FAM69CQ0P6D2 419 aa31.3■■■□□ 2.6
SNX17-206ENST00000484886 ZCCHC11Q5TAX3 1644 aaKnown RBP31.3■■■□□ 2.6
SNX17-206ENST00000484886 FHOD3Q2V2M9 1422 aa31.29■■■□□ 2.6
SNX17-206ENST00000484886 ASXL2Q76L83 1435 aa31.27■■■□□ 2.6
SNX17-206ENST00000484886 DIP2BQ9P265 1576 aa31.26■■■□□ 2.6
SNX17-206ENST00000484886 ARID3CA6NKF2 412 aa31.19■■■□□ 2.58
SNX17-206ENST00000484886 RAPGEF6Q8TEU7 1601 aa31.19■■■□□ 2.58
SNX17-206ENST00000484886 ARHGAP35Q9NRY4 1499 aa31.11■■■□□ 2.57
SNX17-206ENST00000484886 WDR7Q9Y4E6 1490 aa31.1■■■□□ 2.57
SNX17-206ENST00000484886 TSPOAP1O95153 1857 aa31.09■■■□□ 2.57
SNX17-206ENST00000484886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.07■■■□□ 2.56
SNX17-206ENST00000484886 HNRNPUL2Q1KMD3 747 aaKnown RBP31.07■■■□□ 2.56
SNX17-206ENST00000484886 EPRSP07814 1512 aaKnown RBP31.07■■■□□ 2.56
SNX17-206ENST00000484886 ATP10BO94823 1461 aa31.06■■■□□ 2.56
SNX17-206ENST00000484886 GLI2P10070 1586 aa31.05■■■□□ 2.56
SNX17-206ENST00000484886 NUP153P49790 1475 aaKnown RBP31.03■■■□□ 2.56
SNX17-206ENST00000484886 FMN1Q68DA7 1419 aa31.01■■■□□ 2.55
SNX17-206ENST00000484886 KCNH8Q96L42 1107 aa31.01■■■□□ 2.55
SNX17-206ENST00000484886 ATP1B4Q9UN42 357 aaPredicted RBP30.98■■■□□ 2.55
SNX17-206ENST00000484886 CLIP1P30622 1438 aa30.95■■■□□ 2.54
SNX17-206ENST00000484886 MAP3K4Q9Y6R4 1608 aa30.93■■■□□ 2.54
SNX17-206ENST00000484886 HECW1Q76N89 1606 aa30.91■■■□□ 2.54
SNX17-206ENST00000484886 PPRC1Q5VV67 1664 aaKnown RBP30.88■■■□□ 2.53
SNX17-206ENST00000484886 CFAP43Q8NDM7 1665 aa30.86■■■□□ 2.53
SNX17-206ENST00000484886 CDK13Q14004 1512 aaKnown RBP30.85■■■□□ 2.53
SNX17-206ENST00000484886 PLEKHD1A6NEE1 506 aa30.84■■■□□ 2.53
SNX17-206ENST00000484886 KDM6BO15054 1643 aa30.84■■■□□ 2.53
SNX17-206ENST00000484886 TEX14Q8IWB6 1497 aa30.83■■■□□ 2.53
SNX17-206ENST00000484886 CD109Q6YHK3 1445 aa30.83■■■□□ 2.53
SNX17-206ENST00000484886 LOC105371045A0A1W2PR82 267 aa30.82■■■□□ 2.52
SNX17-206ENST00000484886 CEP162Q5TB80 1403 aa30.79■■■□□ 2.52
SNX17-206ENST00000484886 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
SNX17-206ENST00000484886 CASKIN1Q8WXD9 1431 aa30.75■■■□□ 2.51
SNX17-206ENST00000484886 ABCA9Q8IUA7 1624 aa30.75■■■□□ 2.51
SNX17-206ENST00000484886 MAGI3Q5TCQ9 1506 aa30.73■■■□□ 2.51
SNX17-206ENST00000484886 CDK11AQ9UQ88 783 aaPredicted RBP30.71■■■□□ 2.51
SNX17-206ENST00000484886 LRRIQ1Q96JM4 1722 aa30.7■■■□□ 2.5
SNX17-206ENST00000484886 FYCO1Q9BQS8 1478 aa30.69■■■□□ 2.5
SNX17-206ENST00000484886 CCDC18Q5T9S5 1454 aa30.66■■■□□ 2.5
SNX17-206ENST00000484886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.61■■■□□ 2.49
SNX17-206ENST00000484886 TTC37Q6PGP7 1564 aa30.59■■■□□ 2.49
SNX17-206ENST00000484886 COL17A1Q9UMD9 1497 aaPredicted RBP30.58■■■□□ 2.49
SNX17-206ENST00000484886 TROQ12816 1431 aaPredicted RBP30.57■■■□□ 2.48
SNX17-206ENST00000484886 KIF14Q15058 1648 aa30.56■■■□□ 2.48
SNX17-206ENST00000484886 NEO1Q92859 1461 aa30.5■■■□□ 2.47
SNX17-206ENST00000484886 PHLDB1Q86UU1 1377 aa30.49■■■□□ 2.47
SNX17-206ENST00000484886 CFAP74Q9C0B2 1584 aa30.47■■■□□ 2.47
SNX17-206ENST00000484886 ARAP3Q8WWN8 1544 aa30.47■■■□□ 2.47
SNX17-206ENST00000484886 FANCAO15360 1455 aa30.46■■■□□ 2.47
SNX17-206ENST00000484886 MYO5CQ9NQX4 1742 aa30.45■■■□□ 2.47
SNX17-206ENST00000484886 PLCH2O75038 1416 aa30.41■■■□□ 2.46
SNX17-206ENST00000484886 AKNAQ7Z591 1439 aa30.39■■■□□ 2.46
SNX17-206ENST00000484886 VPS8Q8N3P4 1428 aa30.39■■■□□ 2.46
SNX17-206ENST00000484886 MTUS2Q5JR59 1369 aa30.38■■■□□ 2.45
SNX17-206ENST00000484886 RAPGEF3O95398 923 aa30.36■■■□□ 2.45
SNX17-206ENST00000484886 ARHGAP5Q13017 1502 aa30.36■■■□□ 2.45
SNX17-206ENST00000484886 EFCAB2Q5VUJ9 269 aa30.34■■■□□ 2.45
SNX17-206ENST00000484886 DENND4BO75064 1496 aaPredicted RBP30.32■■■□□ 2.44
SNX17-206ENST00000484886 ADGRL1O94910 1474 aa30.31■■■□□ 2.44
SNX17-206ENST00000484886 PREX2Q70Z35 1606 aa30.29■■■□□ 2.44
SNX17-206ENST00000484886 EHBP1L1Q8N3D4 1523 aa30.28■■■□□ 2.44
SNX17-206ENST00000484886 FRMPD1Q5SYB0 1578 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms