RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 FAM69CQ0P6D2 419 aa25.56■■□□□ 1.68
HLA-F-226ENST00000484704 IGF1RP08069 1367 aa25.55■■□□□ 1.68
HLA-F-226ENST00000484704 CUL7Q14999 1698 aa25.53■■□□□ 1.68
HLA-F-226ENST00000484704 KIF13AQ9H1H9 1805 aa25.53■■□□□ 1.68
HLA-F-226ENST00000484704 NPM1P06748 294 aaKnown RBP eCLIP25.51■■□□□ 1.67
HLA-F-226ENST00000484704 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
HLA-F-226ENST00000484704 ABCC10Q5T3U5 1492 aa25.46■■□□□ 1.67
HLA-F-226ENST00000484704 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.67
HLA-F-226ENST00000484704 KIAA0586Q9BVV6 1533 aa25.39■■□□□ 1.66
HLA-F-226ENST00000484704 ADCY10Q96PN6 1610 aa25.39■■□□□ 1.66
HLA-F-226ENST00000484704 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
HLA-F-226ENST00000484704 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
HLA-F-226ENST00000484704 DIP2BQ9P265 1576 aa25.33■■□□□ 1.65
HLA-F-226ENST00000484704 PTPRGP23470 1445 aa25.28■■□□□ 1.64
HLA-F-226ENST00000484704 KDM4FA0A1W2PPD8 638 aa25.27■■□□□ 1.64
HLA-F-226ENST00000484704 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
HLA-F-226ENST00000484704 TSPOAP1O95153 1857 aa25.19■■□□□ 1.62
HLA-F-226ENST00000484704 KDM6BO15054 1643 aa25.19■■□□□ 1.62
HLA-F-226ENST00000484704 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
HLA-F-226ENST00000484704 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
HLA-F-226ENST00000484704 CARMIL2Q6F5E8 1435 aa25.14■■□□□ 1.62
HLA-F-226ENST00000484704 ABCC2Q92887 1545 aa25.11■■□□□ 1.61
HLA-F-226ENST00000484704 ASXL2Q76L83 1435 aa25.11■■□□□ 1.61
HLA-F-226ENST00000484704 CSRNP3Q8WYN3 585 aa25.09■■□□□ 1.61
HLA-F-226ENST00000484704 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
HLA-F-226ENST00000484704 EEA1Q15075 1411 aa25.06■■□□□ 1.6
HLA-F-226ENST00000484704 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
HLA-F-226ENST00000484704 UACAQ9BZF9 1416 aa25.04■■□□□ 1.6
HLA-F-226ENST00000484704 CTTNBP2Q8WZ74 1663 aa25.04■■□□□ 1.6
HLA-F-226ENST00000484704 PLB1Q6P1J6 1458 aa25.03■■□□□ 1.6
HLA-F-226ENST00000484704 DISP1Q96F81 1524 aa25.03■■□□□ 1.6
HLA-F-226ENST00000484704 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
HLA-F-226ENST00000484704 UHRF1BP1LA0JNW5 1464 aa25.02■■□□□ 1.6
HLA-F-226ENST00000484704 UGGT2Q9NYU1 1516 aa24.98■■□□□ 1.59
HLA-F-226ENST00000484704 PPRC1Q5VV67 1664 aaKnown RBP24.97■■□□□ 1.59
HLA-F-226ENST00000484704 GLI2P10070 1586 aa24.97■■□□□ 1.59
HLA-F-226ENST00000484704 COL17A1Q9UMD9 1497 aaPredicted RBP24.97■■□□□ 1.59
HLA-F-226ENST00000484704 EPRSP07814 1512 aaKnown RBP24.93■■□□□ 1.58
HLA-F-226ENST00000484704 KDM5BQ9UGL1 1544 aa24.92■■□□□ 1.58
HLA-F-226ENST00000484704 GOLGA3Q08378 1498 aa24.92■■□□□ 1.58
HLA-F-226ENST00000484704 KIAA0556O60303 1618 aa24.92■■□□□ 1.58
HLA-F-226ENST00000484704 ADGRL1O94910 1474 aa24.87■■□□□ 1.57
HLA-F-226ENST00000484704 ZCCHC11Q5TAX3 1644 aaKnown RBP24.83■■□□□ 1.57
HLA-F-226ENST00000484704 MAP3K4Q9Y6R4 1608 aa24.83■■□□□ 1.56
HLA-F-226ENST00000484704 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
HLA-F-226ENST00000484704 ILDR1Q86SU0 546 aaPredicted RBP24.81■■□□□ 1.56
HLA-F-226ENST00000484704 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
HLA-F-226ENST00000484704 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
HLA-F-226ENST00000484704 KCNH8Q96L42 1107 aa24.79■■□□□ 1.56
HLA-F-226ENST00000484704 TEX14Q8IWB6 1497 aa24.78■■□□□ 1.56
HLA-F-226ENST00000484704 KIF21BO75037 1637 aa24.78■■□□□ 1.56
HLA-F-226ENST00000484704 WDR7Q9Y4E6 1490 aa24.76■■□□□ 1.55
HLA-F-226ENST00000484704 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
HLA-F-226ENST00000484704 CD109Q6YHK3 1445 aa24.7■■□□□ 1.55
HLA-F-226ENST00000484704 ARID3CA6NKF2 412 aa24.67■■□□□ 1.54
HLA-F-226ENST00000484704 ABCA8O94911 1581 aa24.65■■□□□ 1.54
HLA-F-226ENST00000484704 SAMD9Q5K651 1589 aa24.65■■□□□ 1.54
HLA-F-226ENST00000484704 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
HLA-F-226ENST00000484704 HECW2Q9P2P5 1572 aa24.59■■□□□ 1.53
HLA-F-226ENST00000484704 FHOD3Q2V2M9 1422 aa24.57■■□□□ 1.52
HLA-F-226ENST00000484704 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
HLA-F-226ENST00000484704 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
HLA-F-226ENST00000484704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
HLA-F-226ENST00000484704 HNRNPUL2Q1KMD3 747 aaKnown RBP24.54■■□□□ 1.52
HLA-F-226ENST00000484704 ATP10BO94823 1461 aa24.53■■□□□ 1.52
HLA-F-226ENST00000484704 RAPGEF6Q8TEU7 1601 aa24.52■■□□□ 1.52
HLA-F-226ENST00000484704 RAPGEF3O95398 923 aa24.46■■□□□ 1.51
HLA-F-226ENST00000484704 ARAP3Q8WWN8 1544 aa24.45■■□□□ 1.51
HLA-F-226ENST00000484704 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
HLA-F-226ENST00000484704 NUP153P49790 1475 aaKnown RBP24.38■■□□□ 1.49
HLA-F-226ENST00000484704 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
HLA-F-226ENST00000484704 FMN1Q68DA7 1419 aa24.36■■□□□ 1.49
HLA-F-226ENST00000484704 PHLDB1Q86UU1 1377 aa24.35■■□□□ 1.49
HLA-F-226ENST00000484704 ABCA9Q8IUA7 1624 aa24.35■■□□□ 1.49
HLA-F-226ENST00000484704 PLEKHD1A6NEE1 506 aa24.34■■□□□ 1.49
HLA-F-226ENST00000484704 PTPRMP28827 1452 aa24.3■■□□□ 1.48
HLA-F-226ENST00000484704 ARID4BQ4LE39 1312 aaPredicted RBP24.29■■□□□ 1.48
HLA-F-226ENST00000484704 NEO1Q92859 1461 aa24.28■■□□□ 1.48
HLA-F-226ENST00000484704 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
HLA-F-226ENST00000484704 ADAMTSL3P82987 1691 aa24.26■■□□□ 1.47
HLA-F-226ENST00000484704 CLIP1P30622 1438 aa24.24■■□□□ 1.47
HLA-F-226ENST00000484704 CDK13Q14004 1512 aaKnown RBP24.23■■□□□ 1.47
HLA-F-226ENST00000484704 FRMPD1Q5SYB0 1578 aa24.22■■□□□ 1.47
HLA-F-226ENST00000484704 CDK11AQ9UQ88 783 aaPredicted RBP24.22■■□□□ 1.47
HLA-F-226ENST00000484704 FBXO41Q8TF61 875 aa24.2■■□□□ 1.46
HLA-F-226ENST00000484704 AKNAQ7Z591 1439 aa24.16■■□□□ 1.46
HLA-F-226ENST00000484704 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
HLA-F-226ENST00000484704 DENND4BO75064 1496 aaPredicted RBP24.15■■□□□ 1.46
HLA-F-226ENST00000484704 PLPPR3Q6T4P5 718 aa24.15■■□□□ 1.46
HLA-F-226ENST00000484704 MADDQ8WXG6 1647 aa24.14■■□□□ 1.46
HLA-F-226ENST00000484704 FANCAO15360 1455 aa24.12■■□□□ 1.45
HLA-F-226ENST00000484704 PCF11O94913 1555 aaKnown RBP24.12■■□□□ 1.45
HLA-F-226ENST00000484704 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
HLA-F-226ENST00000484704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.1■■□□□ 1.45
HLA-F-226ENST00000484704 HSPA2P54652 639 aa24.1■■□□□ 1.45
HLA-F-226ENST00000484704 LMTK3Q96Q04 1460 aa24.09■■□□□ 1.45
HLA-F-226ENST00000484704 CCDC18Q5T9S5 1454 aa24.07■■□□□ 1.44
HLA-F-226ENST00000484704 YEATS2Q9ULM3 1422 aa24.07■■□□□ 1.44
HLA-F-226ENST00000484704 ARHGEF40Q8TER5 1519 aa24.06■■□□□ 1.44
HLA-F-226ENST00000484704 MLECQ14165 292 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms