RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 NISCHQ9Y2I1 1504 aa36.48■■■■□ 3.43
HLA-F-226ENST00000484704 ABCC9O60706 1549 aa33.12■■■□□ 2.89
HLA-F-226ENST00000484704 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
HLA-F-226ENST00000484704 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
HLA-F-226ENST00000484704 RB1CC1Q8TDY2 1594 aa31.24■■■□□ 2.59
HLA-F-226ENST00000484704 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
HLA-F-226ENST00000484704 NACADO15069 1562 aa30.96■■■□□ 2.55
HLA-F-226ENST00000484704 PABPN1Q86U42 306 aaKnown RBP eCLIP30.91■■■□□ 2.54
HLA-F-226ENST00000484704 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.47
HLA-F-226ENST00000484704 BICRAQ9NZM4 1560 aa30.42■■■□□ 2.46
HLA-F-226ENST00000484704 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
HLA-F-226ENST00000484704 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
HLA-F-226ENST00000484704 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
HLA-F-226ENST00000484704 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
HLA-F-226ENST00000484704 CECR2Q9BXF3 1484 aa29.82■■■□□ 2.36
HLA-F-226ENST00000484704 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
HLA-F-226ENST00000484704 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
HLA-F-226ENST00000484704 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
HLA-F-226ENST00000484704 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
HLA-F-226ENST00000484704 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
HLA-F-226ENST00000484704 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
HLA-F-226ENST00000484704 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
HLA-F-226ENST00000484704 CUX2O14529 1486 aa28.53■■■□□ 2.16
HLA-F-226ENST00000484704 NESP48681 1621 aa28.39■■■□□ 2.13
HLA-F-226ENST00000484704 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
HLA-F-226ENST00000484704 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
HLA-F-226ENST00000484704 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
HLA-F-226ENST00000484704 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
HLA-F-226ENST00000484704 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
HLA-F-226ENST00000484704 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
HLA-F-226ENST00000484704 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
HLA-F-226ENST00000484704 THOC2Q8NI27 1593 aaKnown RBP28.01■■■□□ 2.07
HLA-F-226ENST00000484704 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
HLA-F-226ENST00000484704 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
HLA-F-226ENST00000484704 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
HLA-F-226ENST00000484704 WIZO95785 1651 aa27.83■■■□□ 2.05
HLA-F-226ENST00000484704 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
HLA-F-226ENST00000484704 RSF1Q96T23 1441 aaPredicted RBP27.72■■■□□ 2.03
HLA-F-226ENST00000484704 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
HLA-F-226ENST00000484704 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
HLA-F-226ENST00000484704 WDR62O43379 1518 aa27.57■■■□□ 2
HLA-F-226ENST00000484704 TOP2AP11388 1531 aaKnown RBP27.52■■■□□ 2
HLA-F-226ENST00000484704 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
HLA-F-226ENST00000484704 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
HLA-F-226ENST00000484704 CFTRP13569 1480 aa27.41■■□□□ 1.98
HLA-F-226ENST00000484704 OSCARQ8IYS5 282 aa27.33■■□□□ 1.97
HLA-F-226ENST00000484704 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
HLA-F-226ENST00000484704 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
HLA-F-226ENST00000484704 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
HLA-F-226ENST00000484704 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
HLA-F-226ENST00000484704 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
HLA-F-226ENST00000484704 IFT140Q96RY7 1462 aa26.96■■□□□ 1.91
HLA-F-226ENST00000484704 TOPBP1Q92547 1522 aa26.92■■□□□ 1.9
HLA-F-226ENST00000484704 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
HLA-F-226ENST00000484704 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
HLA-F-226ENST00000484704 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
HLA-F-226ENST00000484704 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
HLA-F-226ENST00000484704 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
HLA-F-226ENST00000484704 CYB5RLQ6IPT4 315 aa26.77■■□□□ 1.88
HLA-F-226ENST00000484704 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
HLA-F-226ENST00000484704 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
HLA-F-226ENST00000484704 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
HLA-F-226ENST00000484704 FBLN2P98095 1184 aa26.71■■□□□ 1.87
HLA-F-226ENST00000484704 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
HLA-F-226ENST00000484704 POLA1P09884 1462 aaPredicted RBP26.63■■□□□ 1.85
HLA-F-226ENST00000484704 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
HLA-F-226ENST00000484704 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
HLA-F-226ENST00000484704 CHD1O14646 1710 aa26.58■■□□□ 1.85
HLA-F-226ENST00000484704 SOGA1O94964 1423 aa26.56■■□□□ 1.84
HLA-F-226ENST00000484704 TRHP20396 242 aaPredicted RBP26.55■■□□□ 1.84
HLA-F-226ENST00000484704 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
HLA-F-226ENST00000484704 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
HLA-F-226ENST00000484704 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
HLA-F-226ENST00000484704 CHMP7Q8WUX9 453 aaPredicted RBP26.42■■□□□ 1.82
HLA-F-226ENST00000484704 CUX1P39880 1505 aa26.38■■□□□ 1.81
HLA-F-226ENST00000484704 CLASP1Q7Z460 1538 aa26.31■■□□□ 1.8
HLA-F-226ENST00000484704 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
HLA-F-226ENST00000484704 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
HLA-F-226ENST00000484704 WDR97A6NE52 1622 aa26.24■■□□□ 1.79
HLA-F-226ENST00000484704 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
HLA-F-226ENST00000484704 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
HLA-F-226ENST00000484704 WRNQ14191 1432 aaPredicted RBP eCLIP26.21■■□□□ 1.79
HLA-F-226ENST00000484704 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
HLA-F-226ENST00000484704 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
HLA-F-226ENST00000484704 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
HLA-F-226ENST00000484704 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
HLA-F-226ENST00000484704 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
HLA-F-226ENST00000484704 ABCA5Q8WWZ7 1642 aa26.02■■□□□ 1.76
HLA-F-226ENST00000484704 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
HLA-F-226ENST00000484704 GRIN2AQ12879 1464 aa25.95■■□□□ 1.74
HLA-F-226ENST00000484704 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
HLA-F-226ENST00000484704 NUP160Q12769 1436 aa25.88■■□□□ 1.73
HLA-F-226ENST00000484704 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
HLA-F-226ENST00000484704 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
HLA-F-226ENST00000484704 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.73
HLA-F-226ENST00000484704 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
HLA-F-226ENST00000484704 JPH4Q96JJ6 628 aa25.73■■□□□ 1.71
HLA-F-226ENST00000484704 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
HLA-F-226ENST00000484704 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
HLA-F-226ENST00000484704 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms