RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
SSR1-208ENST00000483409 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
SSR1-208ENST00000483409 KIAA0586Q9BVV6 1533 aa22.51■■□□□ 1.19
SSR1-208ENST00000483409 JPH4Q96JJ6 628 aa22.48■■□□□ 1.19
SSR1-208ENST00000483409 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
SSR1-208ENST00000483409 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
SSR1-208ENST00000483409 EEA1Q15075 1411 aa22.44■■□□□ 1.18
SSR1-208ENST00000483409 IQGAP2Q13576 1575 aa22.43■■□□□ 1.18
SSR1-208ENST00000483409 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
SSR1-208ENST00000483409 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
SSR1-208ENST00000483409 CSRNP3Q8WYN3 585 aa22.41■■□□□ 1.18
SSR1-208ENST00000483409 UGGT2Q9NYU1 1516 aa22.28■■□□□ 1.16
SSR1-208ENST00000483409 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.16
SSR1-208ENST00000483409 KIF21BO75037 1637 aa22.27■■□□□ 1.16
SSR1-208ENST00000483409 DISP1Q96F81 1524 aa22.25■■□□□ 1.15
SSR1-208ENST00000483409 KIAA0556O60303 1618 aa22.23■■□□□ 1.15
SSR1-208ENST00000483409 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
SSR1-208ENST00000483409 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
SSR1-208ENST00000483409 PTPRGP23470 1445 aa22.18■■□□□ 1.14
SSR1-208ENST00000483409 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
SSR1-208ENST00000483409 EHMT2Q96KQ7 1210 aa22.16■■□□□ 1.14
SSR1-208ENST00000483409 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
SSR1-208ENST00000483409 TRHP20396 242 aaPredicted RBP22.1■■□□□ 1.13
SSR1-208ENST00000483409 SAMD9Q5K651 1589 aa22.08■■□□□ 1.12
SSR1-208ENST00000483409 RANGAP1P46060 587 aaPredicted RBP22.06■■□□□ 1.12
SSR1-208ENST00000483409 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
SSR1-208ENST00000483409 P3H3Q8IVL6 736 aa22.04■■□□□ 1.12
SSR1-208ENST00000483409 UACAQ9BZF9 1416 aa22.04■■□□□ 1.12
SSR1-208ENST00000483409 ABCC2Q92887 1545 aa22.03■■□□□ 1.12
SSR1-208ENST00000483409 NPM1P06748 294 aaKnown RBP eCLIP22.03■■□□□ 1.12
SSR1-208ENST00000483409 UHRF1BP1LA0JNW5 1464 aa22.02■■□□□ 1.12
SSR1-208ENST00000483409 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
SSR1-208ENST00000483409 MAPKBP1O60336 1514 aa21.99■■□□□ 1.11
SSR1-208ENST00000483409 KIF13AQ9H1H9 1805 aa21.97■■□□□ 1.11
SSR1-208ENST00000483409 ABCA8O94911 1581 aa21.96■■□□□ 1.11
SSR1-208ENST00000483409 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
SSR1-208ENST00000483409 FHOD3Q2V2M9 1422 aa21.94■■□□□ 1.1
SSR1-208ENST00000483409 ZCCHC11Q5TAX3 1644 aaKnown RBP21.94■■□□□ 1.1
SSR1-208ENST00000483409 KDM5BQ9UGL1 1544 aa21.91■■□□□ 1.1
SSR1-208ENST00000483409 DIP2BQ9P265 1576 aa21.89■■□□□ 1.09
SSR1-208ENST00000483409 RAPGEF6Q8TEU7 1601 aa21.88■■□□□ 1.09
SSR1-208ENST00000483409 ABCC10Q5T3U5 1492 aa21.87■■□□□ 1.09
SSR1-208ENST00000483409 ASXL2Q76L83 1435 aa21.87■■□□□ 1.09
SSR1-208ENST00000483409 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
SSR1-208ENST00000483409 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
SSR1-208ENST00000483409 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
SSR1-208ENST00000483409 TSPOAP1O95153 1857 aa21.79■■□□□ 1.08
SSR1-208ENST00000483409 ATP10BO94823 1461 aa21.77■■□□□ 1.07
SSR1-208ENST00000483409 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.07
SSR1-208ENST00000483409 WDR7Q9Y4E6 1490 aa21.76■■□□□ 1.07
SSR1-208ENST00000483409 EPRSP07814 1512 aaKnown RBP21.74■■□□□ 1.07
SSR1-208ENST00000483409 GLI2P10070 1586 aa21.73■■□□□ 1.07
SSR1-208ENST00000483409 FMN1Q68DA7 1419 aa21.72■■□□□ 1.07
SSR1-208ENST00000483409 CLIP1P30622 1438 aa21.72■■□□□ 1.07
SSR1-208ENST00000483409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
SSR1-208ENST00000483409 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
SSR1-208ENST00000483409 HECW1Q76N89 1606 aa21.68■■□□□ 1.06
SSR1-208ENST00000483409 MAP3K4Q9Y6R4 1608 aa21.68■■□□□ 1.06
SSR1-208ENST00000483409 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
SSR1-208ENST00000483409 PPRC1Q5VV67 1664 aaKnown RBP21.66■■□□□ 1.06
SSR1-208ENST00000483409 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
SSR1-208ENST00000483409 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
SSR1-208ENST00000483409 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.05
SSR1-208ENST00000483409 PCF11O94913 1555 aaKnown RBP21.64■■□□□ 1.05
SSR1-208ENST00000483409 LRRIQ1Q96JM4 1722 aa21.63■■□□□ 1.05
SSR1-208ENST00000483409 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
SSR1-208ENST00000483409 CFAP43Q8NDM7 1665 aa21.62■■□□□ 1.05
SSR1-208ENST00000483409 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
SSR1-208ENST00000483409 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
SSR1-208ENST00000483409 KDM6BO15054 1643 aa21.55■■□□□ 1.04
SSR1-208ENST00000483409 CD109Q6YHK3 1445 aa21.55■■□□□ 1.04
SSR1-208ENST00000483409 PLEKHD1A6NEE1 506 aa21.54■■□□□ 1.04
SSR1-208ENST00000483409 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
SSR1-208ENST00000483409 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.04
SSR1-208ENST00000483409 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
SSR1-208ENST00000483409 CCDC18Q5T9S5 1454 aa21.49■■□□□ 1.03
SSR1-208ENST00000483409 TTC37Q6PGP7 1564 aa21.47■■□□□ 1.03
SSR1-208ENST00000483409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.46■■□□□ 1.038e-6■□□□□ 10.5
SSR1-208ENST00000483409 KIF14Q15058 1648 aa21.44■■□□□ 1.02
SSR1-208ENST00000483409 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
SSR1-208ENST00000483409 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
SSR1-208ENST00000483409 COL17A1Q9UMD9 1497 aaPredicted RBP21.4■■□□□ 1.02
SSR1-208ENST00000483409 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
SSR1-208ENST00000483409 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
SSR1-208ENST00000483409 CFAP74Q9C0B2 1584 aa21.34■■□□□ 1.01
SSR1-208ENST00000483409 NEO1Q92859 1461 aa21.33■■□□□ 1.01
SSR1-208ENST00000483409 FANCAO15360 1455 aa21.32■■□□□ 1
SSR1-208ENST00000483409 ARAP3Q8WWN8 1544 aa21.3■■□□□ 1
SSR1-208ENST00000483409 PLCH2O75038 1416 aa21.29■■□□□ 1
SSR1-208ENST00000483409 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
SSR1-208ENST00000483409 CDC42BPAQ5VT25 1732 aa21.27■■□□□ 1
SSR1-208ENST00000483409 CDC42BPBQ9Y5S2 1711 aa21.27■■□□□ 1
SSR1-208ENST00000483409 MTUS2Q5JR59 1369 aa21.27■■□□□ 1
SSR1-208ENST00000483409 PREX2Q70Z35 1606 aa21.26■□□□□ 0.99
SSR1-208ENST00000483409 AKNAQ7Z591 1439 aa21.26■□□□□ 0.99
SSR1-208ENST00000483409 TIAM1Q13009 1591 aa21.26■□□□□ 0.99
SSR1-208ENST00000483409 ARHGAP5Q13017 1502 aa21.25■□□□□ 0.99
SSR1-208ENST00000483409 EHBP1L1Q8N3D4 1523 aa21.25■□□□□ 0.99
SSR1-208ENST00000483409 FRMPD1Q5SYB0 1578 aa21.23■□□□□ 0.99
SSR1-208ENST00000483409 RICTORQ6R327 1708 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms