RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 JPH4Q96JJ6 628 aa20.89■□□□□ 0.93
HDLBP-239ENST00000483086 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
HDLBP-239ENST00000483086 KIAA0586Q9BVV6 1533 aa20.86■□□□□ 0.93
HDLBP-239ENST00000483086 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
HDLBP-239ENST00000483086 ADCY10Q96PN6 1610 aa20.75■□□□□ 0.91
HDLBP-239ENST00000483086 IQGAP2Q13576 1575 aa20.74■□□□□ 0.91
HDLBP-239ENST00000483086 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
HDLBP-239ENST00000483086 KIF13AQ9H1H9 1805 aa20.71■□□□□ 0.91
HDLBP-239ENST00000483086 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
HDLBP-239ENST00000483086 CTTNBP2Q8WZ74 1663 aa20.67■□□□□ 0.9
HDLBP-239ENST00000483086 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
HDLBP-239ENST00000483086 UGGT2Q9NYU1 1516 aa20.63■□□□□ 0.89
HDLBP-239ENST00000483086 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
HDLBP-239ENST00000483086 PTPRGP23470 1445 aa20.58■□□□□ 0.88
HDLBP-239ENST00000483086 MAPKBP1O60336 1514 aa20.58■□□□□ 0.88
HDLBP-239ENST00000483086 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
HDLBP-239ENST00000483086 TTBK1Q5TCY1 1321 aaPredicted RBP20.56■□□□□ 0.88
HDLBP-239ENST00000483086 CARMIL2Q6F5E8 1435 aa20.55■□□□□ 0.88
HDLBP-239ENST00000483086 DIP2BQ9P265 1576 aa20.54■□□□□ 0.88
HDLBP-239ENST00000483086 ABCC10Q5T3U5 1492 aa20.51■□□□□ 0.87
HDLBP-239ENST00000483086 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
HDLBP-239ENST00000483086 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
HDLBP-239ENST00000483086 UHRF1BP1LA0JNW5 1464 aa20.47■□□□□ 0.87
HDLBP-239ENST00000483086 UACAQ9BZF9 1416 aa20.46■□□□□ 0.87
HDLBP-239ENST00000483086 TSPOAP1O95153 1857 aa20.43■□□□□ 0.86
HDLBP-239ENST00000483086 ZCCHC11Q5TAX3 1644 aaKnown RBP20.43■□□□□ 0.86
HDLBP-239ENST00000483086 NPM1P06748 294 aaKnown RBP eCLIP20.43■□□□□ 0.86
HDLBP-239ENST00000483086 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
HDLBP-239ENST00000483086 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
HDLBP-239ENST00000483086 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
HDLBP-239ENST00000483086 KDM5BQ9UGL1 1544 aa20.41■□□□□ 0.86
HDLBP-239ENST00000483086 FAM9AQ8IZU1 332 aaPredicted RBP20.4■□□□□ 0.86
HDLBP-239ENST00000483086 ABCA8O94911 1581 aa20.39■□□□□ 0.85
HDLBP-239ENST00000483086 EEA1Q15075 1411 aa20.39■□□□□ 0.85
HDLBP-239ENST00000483086 ASXL2Q76L83 1435 aa20.39■□□□□ 0.85
HDLBP-239ENST00000483086 PPRC1Q5VV67 1664 aaKnown RBP20.38■□□□□ 0.85
HDLBP-239ENST00000483086 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
HDLBP-239ENST00000483086 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
HDLBP-239ENST00000483086 KIF21BO75037 1637 aa20.35■□□□□ 0.85
HDLBP-239ENST00000483086 GLI2P10070 1586 aa20.31■□□□□ 0.84
HDLBP-239ENST00000483086 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
HDLBP-239ENST00000483086 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
HDLBP-239ENST00000483086 MAP3K4Q9Y6R4 1608 aa20.27■□□□□ 0.84
HDLBP-239ENST00000483086 KDM6BO15054 1643 aa20.23■□□□□ 0.83
HDLBP-239ENST00000483086 WDR7Q9Y4E6 1490 aa20.22■□□□□ 0.83
HDLBP-239ENST00000483086 FHOD3Q2V2M9 1422 aa20.21■□□□□ 0.83
HDLBP-239ENST00000483086 RANGAP1P46060 587 aaPredicted RBP20.21■□□□□ 0.83
HDLBP-239ENST00000483086 RAPGEF6Q8TEU7 1601 aa20.2■□□□□ 0.82
HDLBP-239ENST00000483086 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
HDLBP-239ENST00000483086 ATP10BO94823 1461 aa20.18■□□□□ 0.82
HDLBP-239ENST00000483086 ARID3CA6NKF2 412 aa20.18■□□□□ 0.82
HDLBP-239ENST00000483086 COL17A1Q9UMD9 1497 aaPredicted RBP20.16■□□□□ 0.82
HDLBP-239ENST00000483086 NUP153P49790 1475 aaKnown RBP20.14■□□□□ 0.81
HDLBP-239ENST00000483086 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
HDLBP-239ENST00000483086 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
HDLBP-239ENST00000483086 KCNH8Q96L42 1107 aa20.09■□□□□ 0.81
HDLBP-239ENST00000483086 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
HDLBP-239ENST00000483086 CD109Q6YHK3 1445 aa20.04■□□□□ 0.8
HDLBP-239ENST00000483086 MAGI3Q5TCQ9 1506 aa20.04■□□□□ 0.8
HDLBP-239ENST00000483086 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
HDLBP-239ENST00000483086 ABCA9Q8IUA7 1624 aa20.04■□□□□ 0.8
HDLBP-239ENST00000483086 TEX14Q8IWB6 1497 aa20.03■□□□□ 0.8
HDLBP-239ENST00000483086 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.79
HDLBP-239ENST00000483086 CDK13Q14004 1512 aaKnown RBP20■□□□□ 0.79
HDLBP-239ENST00000483086 KDM4FA0A1W2PPD8 638 aa19.93■□□□□ 0.78
HDLBP-239ENST00000483086 TTC37Q6PGP7 1564 aa19.92■□□□□ 0.78
HDLBP-239ENST00000483086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
HDLBP-239ENST00000483086 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
HDLBP-239ENST00000483086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.91■□□□□ 0.78
HDLBP-239ENST00000483086 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
HDLBP-239ENST00000483086 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
HDLBP-239ENST00000483086 ARAP3Q8WWN8 1544 aa19.88■□□□□ 0.77
HDLBP-239ENST00000483086 FMN1Q68DA7 1419 aa19.88■□□□□ 0.77
HDLBP-239ENST00000483086 FRMPD1Q5SYB0 1578 aa19.87■□□□□ 0.77
HDLBP-239ENST00000483086 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
HDLBP-239ENST00000483086 KIF14Q15058 1648 aa19.84■□□□□ 0.77
HDLBP-239ENST00000483086 PLEKHD1A6NEE1 506 aa19.83■□□□□ 0.77
HDLBP-239ENST00000483086 ADGRL1O94910 1474 aa19.82■□□□□ 0.76
HDLBP-239ENST00000483086 NEO1Q92859 1461 aa19.82■□□□□ 0.76
HDLBP-239ENST00000483086 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
HDLBP-239ENST00000483086 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
HDLBP-239ENST00000483086 RAPGEF3O95398 923 aa19.78■□□□□ 0.76
HDLBP-239ENST00000483086 CLIP1P30622 1438 aa19.76■□□□□ 0.75
HDLBP-239ENST00000483086 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
HDLBP-239ENST00000483086 MYO5CQ9NQX4 1742 aa19.76■□□□□ 0.75
HDLBP-239ENST00000483086 FANCAO15360 1455 aa19.75■□□□□ 0.75
HDLBP-239ENST00000483086 PHLDB1Q86UU1 1377 aa19.74■□□□□ 0.75
HDLBP-239ENST00000483086 AKNAQ7Z591 1439 aa19.74■□□□□ 0.75
HDLBP-239ENST00000483086 TROQ12816 1431 aaPredicted RBP19.73■□□□□ 0.75
HDLBP-239ENST00000483086 CFAP74Q9C0B2 1584 aa19.73■□□□□ 0.75
HDLBP-239ENST00000483086 SIGLEC1Q9BZZ2 1709 aa19.72■□□□□ 0.75
HDLBP-239ENST00000483086 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
HDLBP-239ENST00000483086 PLCH2O75038 1416 aa19.71■□□□□ 0.75
HDLBP-239ENST00000483086 FYCO1Q9BQS8 1478 aa19.71■□□□□ 0.75
HDLBP-239ENST00000483086 DENND4BO75064 1496 aaPredicted RBP19.67■□□□□ 0.74
HDLBP-239ENST00000483086 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
HDLBP-239ENST00000483086 ARHGEF40Q8TER5 1519 aa19.66■□□□□ 0.74
HDLBP-239ENST00000483086 CDC42BPAQ5VT25 1732 aa19.65■□□□□ 0.74
HDLBP-239ENST00000483086 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
HDLBP-239ENST00000483086 ZMYM4Q5VZL5 1548 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms