RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, human

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM1-215	ENST00000483021	JPH4	Q96JJ6	628 aa		33.98	■■■■□ 3.03
R3HDM1-215	ENST00000483021	IGF1R	P08069	1367 aa		33.96	■■■■□ 3.03
R3HDM1-215	ENST00000483021	KIAA0586	Q9BVV6	1533 aa		33.89	■■■■□ 3.02
R3HDM1-215	ENST00000483021	CARMIL1	Q5VZK9	1371 aa		33.76	■■■■□ 3
R3HDM1-215	ENST00000483021	KIF13A	Q9H1H9	1805 aa		33.74	■■■□□ 2.99
R3HDM1-215	ENST00000483021	ADCY10	Q96PN6	1610 aa		33.68	■■■□□ 2.98
R3HDM1-215	ENST00000483021	MAPKBP1	O60336	1514 aa		33.64	■■■□□ 2.98
R3HDM1-215	ENST00000483021	NPM1	P06748	294 aa	Known RBP eCLIP	33.62	■■■□□ 2.97
R3HDM1-215	ENST00000483021	IQGAP2	Q13576	1575 aa		33.62	■■■□□ 2.97
R3HDM1-215	ENST00000483021	CARMIL2	Q6F5E8	1435 aa		33.56	■■■□□ 2.96
R3HDM1-215	ENST00000483021	ABCC10	Q5T3U5	1492 aa		33.56	■■■□□ 2.96
R3HDM1-215	ENST00000483021	RAPGEF2	Q9Y4G8	1499 aa		33.51	■■■□□ 2.96
R3HDM1-215	ENST00000483021	PTPRG	P23470	1445 aa		33.51	■■■□□ 2.95
R3HDM1-215	ENST00000483021	DIP2B	Q9P265	1576 aa		33.51	■■■□□ 2.95
R3HDM1-215	ENST00000483021	TNIK	Q9UKE5	1360 aa		33.47	■■■□□ 2.95
R3HDM1-215	ENST00000483021	FAM69C	Q0P6D2	419 aa		33.44	■■■□□ 2.94
R3HDM1-215	ENST00000483021	UGGT2	Q9NYU1	1516 aa		33.39	■■■□□ 2.94
R3HDM1-215	ENST00000483021	DISP1	Q96F81	1524 aa		33.38	■■■□□ 2.93
R3HDM1-215	ENST00000483021	ABCC2	Q92887	1545 aa		33.37	■■■□□ 2.93
R3HDM1-215	ENST00000483021	CTTNBP2	Q8WZ74	1663 aa		33.35	■■■□□ 2.93
R3HDM1-215	ENST00000483021	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.33	■■■□□ 2.93
R3HDM1-215	ENST00000483021	UHRF1BP1L	A0JNW5	1464 aa		33.33	■■■□□ 2.93
R3HDM1-215	ENST00000483021	KIAA0556	O60303	1618 aa		33.31	■■■□□ 2.92
R3HDM1-215	ENST00000483021	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.28	■■■□□ 2.92
R3HDM1-215	ENST00000483021	UACA	Q9BZF9	1416 aa		33.28	■■■□□ 2.92
R3HDM1-215	ENST00000483021	TSPOAP1	O95153	1857 aa		33.26	■■■□□ 2.91
R3HDM1-215	ENST00000483021	PLB1	Q6P1J6	1458 aa		33.23	■■■□□ 2.91
R3HDM1-215	ENST00000483021	ASXL2	Q76L83	1435 aa		33.2	■■■□□ 2.91
R3HDM1-215	ENST00000483021	KDM6B	O15054	1643 aa		33.2	■■■□□ 2.9
R3HDM1-215	ENST00000483021	PRX	Q9BXM0	1461 aa		33.18	■■■□□ 2.9
R3HDM1-215	ENST00000483021	KDM5B	Q9UGL1	1544 aa		33.17	■■■□□ 2.9
R3HDM1-215	ENST00000483021	GLI2	P10070	1586 aa		33.17	■■■□□ 2.9
R3HDM1-215	ENST00000483021	GOLGA3	Q08378	1498 aa		33.15	■■■□□ 2.9
R3HDM1-215	ENST00000483021	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.13	■■■□□ 2.89
R3HDM1-215	ENST00000483021	PPRC1	Q5VV67	1664 aa	Known RBP	33.06	■■■□□ 2.88
R3HDM1-215	ENST00000483021	EPRS	P07814	1512 aa	Known RBP	33.02	■■■□□ 2.88
R3HDM1-215	ENST00000483021	MAP3K4	Q9Y6R4	1608 aa		33	■■■□□ 2.87
R3HDM1-215	ENST00000483021	ABCA8	O94911	1581 aa		32.97	■■■□□ 2.87
R3HDM1-215	ENST00000483021	WDR7	Q9Y4E6	1490 aa		32.93	■■■□□ 2.86
R3HDM1-215	ENST00000483021	EEA1	Q15075	1411 aa		32.9	■■■□□ 2.86
R3HDM1-215	ENST00000483021	TEX14	Q8IWB6	1497 aa		32.9	■■■□□ 2.86
R3HDM1-215	ENST00000483021	CSRNP3	Q8WYN3	585 aa		32.89	■■■□□ 2.86
R3HDM1-215	ENST00000483021	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.82	■■■□□ 2.84
R3HDM1-215	ENST00000483021	SAMD9	Q5K651	1589 aa		32.82	■■■□□ 2.84
R3HDM1-215	ENST00000483021	CFAP43	Q8NDM7	1665 aa		32.81	■■■□□ 2.84
R3HDM1-215	ENST00000483021	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.72	■■■□□ 2.83
R3HDM1-215	ENST00000483021	MAGI3	Q5TCQ9	1506 aa		32.71	■■■□□ 2.83
R3HDM1-215	ENST00000483021	P3H3	Q8IVL6	736 aa		32.69	■■■□□ 2.82
R3HDM1-215	ENST00000483021	CD109	Q6YHK3	1445 aa		32.68	■■■□□ 2.82
R3HDM1-215	ENST00000483021	RAPGEF6	Q8TEU7	1601 aa		32.67	■■■□□ 2.82
R3HDM1-215	ENST00000483021	KDM4F	A0A1W2PPD8	638 aa		32.66	■■■□□ 2.82
R3HDM1-215	ENST00000483021	KCNH8	Q96L42	1107 aa		32.65	■■■□□ 2.82
R3HDM1-215	ENST00000483021	ATP10B	O94823	1461 aa		32.65	■■■□□ 2.82
R3HDM1-215	ENST00000483021	KIF21B	O75037	1637 aa		32.65	■■■□□ 2.82
R3HDM1-215	ENST00000483021	ARID3C	A6NKF2	412 aa		32.55	■■■□□ 2.8
R3HDM1-215	ENST00000483021	ABCA9	Q8IUA7	1624 aa		32.55	■■■□□ 2.8
R3HDM1-215	ENST00000483021	EFCAB5	A4FU69	1503 aa		32.54	■■■□□ 2.8
R3HDM1-215	ENST00000483021	ADGRL1	O94910	1474 aa		32.54	■■■□□ 2.8
R3HDM1-215	ENST00000483021	FHOD3	Q2V2M9	1422 aa		32.51	■■■□□ 2.8
R3HDM1-215	ENST00000483021	NUP153	P49790	1475 aa	Known RBP	32.49	■■■□□ 2.79
R3HDM1-215	ENST00000483021	RANGAP1	P46060	587 aa	Predicted RBP	32.46	■■■□□ 2.79
R3HDM1-215	ENST00000483021	ARAP3	Q8WWN8	1544 aa		32.44	■■■□□ 2.78
R3HDM1-215	ENST00000483021	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.42	■■■□□ 2.78
R3HDM1-215	ENST00000483021	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.42	■■■□□ 2.78
R3HDM1-215	ENST00000483021	PHLDB1	Q86UU1	1377 aa		32.41	■■■□□ 2.78
R3HDM1-215	ENST00000483021	NEO1	Q92859	1461 aa		32.35	■■■□□ 2.77
R3HDM1-215	ENST00000483021	CHIC1	Q5VXU3	224 aa		32.33	■■■□□ 2.77
R3HDM1-215	ENST00000483021	PLEKHD1	A6NEE1	506 aa		32.27	■■■□□ 2.76
R3HDM1-215	ENST00000483021	UBTF	P17480	764 aa	Known RBP	32.26	■■■□□ 2.75
R3HDM1-215	ENST00000483021	CFAP74	Q9C0B2	1584 aa		32.23	■■■□□ 2.75
R3HDM1-215	ENST00000483021	FMN1	Q68DA7	1419 aa		32.21	■■■□□ 2.75
R3HDM1-215	ENST00000483021	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.2	■■■□□ 2.74
R3HDM1-215	ENST00000483021	HECW1	Q76N89	1606 aa		32.19	■■■□□ 2.74
R3HDM1-215	ENST00000483021	FRMPD1	Q5SYB0	1578 aa		32.19	■■■□□ 2.74
R3HDM1-215	ENST00000483021	CDK13	Q14004	1512 aa	Known RBP	32.18	■■■□□ 2.74
R3HDM1-215	ENST00000483021	ARHGAP35	Q9NRY4	1499 aa		32.17	■■■□□ 2.74
R3HDM1-215	ENST00000483021	TTC37	Q6PGP7	1564 aa		32.16	■■■□□ 2.74
R3HDM1-215	ENST00000483021	EHMT2	Q96KQ7	1210 aa		32.16	■■■□□ 2.74
R3HDM1-215	ENST00000483021	RAPGEF3	O95398	923 aa		32.14	■■■□□ 2.74
R3HDM1-215	ENST00000483021	FANCA	O15360	1455 aa		32.12	■■■□□ 2.73
R3HDM1-215	ENST00000483021	RICTOR	Q6R327	1708 aa		32.12	■■■□□ 2.73
R3HDM1-215	ENST00000483021	DENND4B	O75064	1496 aa	Predicted RBP	32.09	■■■□□ 2.73
R3HDM1-215	ENST00000483021	AKNA	Q7Z591	1439 aa		32.09	■■■□□ 2.73
R3HDM1-215	ENST00000483021	HECW2	Q9P2P5	1572 aa		32.07	■■■□□ 2.72
R3HDM1-215	ENST00000483021	ARHGEF40	Q8TER5	1519 aa		32.05	■■■□□ 2.72
R3HDM1-215	ENST00000483021	ADAMTSL3	P82987	1691 aa		32.04	■■■□□ 2.72
R3HDM1-215	ENST00000483021	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.01	■■■□□ 2.71
R3HDM1-215	ENST00000483021	MYO5C	Q9NQX4	1742 aa		32	■■■□□ 2.71
R3HDM1-215	ENST00000483021	BCORL1	Q5H9F3	1711 aa		32	■■■□□ 2.71
R3HDM1-215	ENST00000483021	ZMYM4	Q5VZL5	1548 aa		32	■■■□□ 2.71
R3HDM1-215	ENST00000483021	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.99	■■■□□ 2.71
R3HDM1-215	ENST00000483021	PLCH2	O75038	1416 aa		31.98	■■■□□ 2.71
R3HDM1-215	ENST00000483021	KIF14	Q15058	1648 aa		31.97	■■■□□ 2.71
R3HDM1-215	ENST00000483021	LRRIQ1	Q96JM4	1722 aa		31.96	■■■□□ 2.71
R3HDM1-215	ENST00000483021	TRO	Q12816	1431 aa	Predicted RBP	31.92	■■■□□ 2.7
R3HDM1-215	ENST00000483021	CLIP1	P30622	1438 aa		31.91	■■■□□ 2.7
R3HDM1-215	ENST00000483021	PTPRM	P28827	1452 aa		31.91	■■■□□ 2.7
R3HDM1-215	ENST00000483021	MAGI2	Q86UL8	1455 aa		31.91	■■■□□ 2.7
R3HDM1-215	ENST00000483021	ZFYVE16	Q7Z3T8	1539 aa		31.9	■■■□□ 2.7
R3HDM1-215	ENST00000483021	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.9	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms