RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 PRG4Q92954 1404 aaPredicted RBP40.17■■■■■ 4.02
RHBDF1-208ENST00000482904 JPH4Q96JJ6 628 aa40.13■■■■■ 4.01
RHBDF1-208ENST00000482904 KIAA0586Q9BVV6 1533 aa40.1■■■■■ 4.01
RHBDF1-208ENST00000482904 TRHP20396 242 aaPredicted RBP40.08■■■■■ 4.01
RHBDF1-208ENST00000482904 RAPGEF2Q9Y4G8 1499 aa39.93■■■■□ 3.98
RHBDF1-208ENST00000482904 IQGAP2Q13576 1575 aa39.85■■■■□ 3.97
RHBDF1-208ENST00000482904 CARMIL2Q6F5E8 1435 aa39.74■■■■□ 3.95
RHBDF1-208ENST00000482904 PRXQ9BXM0 1461 aa39.63■■■■□ 3.94
RHBDF1-208ENST00000482904 PTPRGP23470 1445 aa39.62■■■■□ 3.93
RHBDF1-208ENST00000482904 TTBK1Q5TCY1 1321 aaPredicted RBP39.62■■■■□ 3.93
RHBDF1-208ENST00000482904 TNIKQ9UKE5 1360 aa39.61■■■■□ 3.93
RHBDF1-208ENST00000482904 ADCY10Q96PN6 1610 aa39.6■■■■□ 3.93
RHBDF1-208ENST00000482904 NPM1P06748 294 aaKnown RBP eCLIP39.59■■■■□ 3.93
RHBDF1-208ENST00000482904 CTTNBP2Q8WZ74 1663 aa39.57■■■■□ 3.93
RHBDF1-208ENST00000482904 UGGT2Q9NYU1 1516 aa39.57■■■■□ 3.93
RHBDF1-208ENST00000482904 DISP1Q96F81 1524 aa39.55■■■■□ 3.92
RHBDF1-208ENST00000482904 EEA1Q15075 1411 aa39.49■■■■□ 3.91
RHBDF1-208ENST00000482904 KIAA0556O60303 1618 aa39.47■■■■□ 3.91
RHBDF1-208ENST00000482904 CSRNP3Q8WYN3 585 aa39.47■■■■□ 3.91
RHBDF1-208ENST00000482904 MAPKBP1O60336 1514 aa39.45■■■■□ 3.91
RHBDF1-208ENST00000482904 GOLGA3Q08378 1498 aa39.37■■■■□ 3.89
RHBDF1-208ENST00000482904 UACAQ9BZF9 1416 aa39.34■■■■□ 3.89
RHBDF1-208ENST00000482904 ABCC2Q92887 1545 aa39.34■■■■□ 3.89
RHBDF1-208ENST00000482904 KIF13AQ9H1H9 1805 aa39.33■■■■□ 3.89
RHBDF1-208ENST00000482904 FAM9AQ8IZU1 332 aaPredicted RBP39.33■■■■□ 3.89
RHBDF1-208ENST00000482904 ABCC10Q5T3U5 1492 aa39.32■■■■□ 3.89
RHBDF1-208ENST00000482904 UHRF1BP1LA0JNW5 1464 aa39.3■■■■□ 3.88
RHBDF1-208ENST00000482904 CHIC1Q5VXU3 224 aa39.29■■■■□ 3.88
RHBDF1-208ENST00000482904 DIP2BQ9P265 1576 aa39.27■■■■□ 3.88
RHBDF1-208ENST00000482904 FAM69CQ0P6D2 419 aa39.26■■■■□ 3.88
RHBDF1-208ENST00000482904 ASXL2Q76L83 1435 aa39.14■■■■□ 3.86
RHBDF1-208ENST00000482904 KIF21BO75037 1637 aa39.12■■■■□ 3.85
RHBDF1-208ENST00000482904 KDM5BQ9UGL1 1544 aa39.12■■■■□ 3.85
RHBDF1-208ENST00000482904 PLB1Q6P1J6 1458 aa39.11■■■■□ 3.85
RHBDF1-208ENST00000482904 ZCCHC11Q5TAX3 1644 aaKnown RBP39.07■■■■□ 3.84
RHBDF1-208ENST00000482904 P3H3Q8IVL6 736 aa39.04■■■■□ 3.84
RHBDF1-208ENST00000482904 ABCA8O94911 1581 aa39.03■■■■□ 3.84
RHBDF1-208ENST00000482904 SAMD9Q5K651 1589 aa39.03■■■■□ 3.84
RHBDF1-208ENST00000482904 RANGAP1P46060 587 aaPredicted RBP38.99■■■■□ 3.83
RHBDF1-208ENST00000482904 GLI2P10070 1586 aa38.92■■■■□ 3.82
RHBDF1-208ENST00000482904 TSPOAP1O95153 1857 aa38.92■■■■□ 3.82
RHBDF1-208ENST00000482904 EHMT2Q96KQ7 1210 aa38.9■■■■□ 3.82
RHBDF1-208ENST00000482904 EPRSP07814 1512 aaKnown RBP38.89■■■■□ 3.82
RHBDF1-208ENST00000482904 WDR7Q9Y4E6 1490 aa38.89■■■■□ 3.82
RHBDF1-208ENST00000482904 FHOD3Q2V2M9 1422 aa38.83■■■■□ 3.81
RHBDF1-208ENST00000482904 UBTFP17480 764 aaKnown RBP38.82■■■■□ 3.8
RHBDF1-208ENST00000482904 EFCAB5A4FU69 1503 aa38.82■■■■□ 3.8
RHBDF1-208ENST00000482904 KDM6BO15054 1643 aa38.79■■■■□ 3.8
RHBDF1-208ENST00000482904 ARID3CA6NKF2 412 aa38.78■■■■□ 3.8
RHBDF1-208ENST00000482904 RAPGEF6Q8TEU7 1601 aa38.78■■■■□ 3.8
RHBDF1-208ENST00000482904 MAP3K4Q9Y6R4 1608 aa38.74■■■■□ 3.79
RHBDF1-208ENST00000482904 PPRC1Q5VV67 1664 aaKnown RBP38.71■■■■□ 3.79
RHBDF1-208ENST00000482904 ATP10BO94823 1461 aa38.68■■■■□ 3.78
RHBDF1-208ENST00000482904 KCNH8Q96L42 1107 aa38.66■■■■□ 3.78
RHBDF1-208ENST00000482904 TEX14Q8IWB6 1497 aa38.66■■■■□ 3.78
RHBDF1-208ENST00000482904 NUP153P49790 1475 aaKnown RBP38.61■■■■□ 3.77
RHBDF1-208ENST00000482904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.61■■■■□ 3.77
RHBDF1-208ENST00000482904 HNRNPUL2Q1KMD3 747 aaKnown RBP38.61■■■■□ 3.77
RHBDF1-208ENST00000482904 CFAP43Q8NDM7 1665 aa38.57■■■■□ 3.76
RHBDF1-208ENST00000482904 CD109Q6YHK3 1445 aa38.55■■■■□ 3.76
RHBDF1-208ENST00000482904 ARHGAP35Q9NRY4 1499 aa38.5■■■■□ 3.75
RHBDF1-208ENST00000482904 MAGI3Q5TCQ9 1506 aa38.48■■■■□ 3.75
RHBDF1-208ENST00000482904 FMN1Q68DA7 1419 aa38.46■■■■□ 3.75
RHBDF1-208ENST00000482904 AEBP2Q6ZN18 517 aaPredicted RBP38.43■■■■□ 3.74
RHBDF1-208ENST00000482904 ABCA9Q8IUA7 1624 aa38.39■■■■□ 3.74
RHBDF1-208ENST00000482904 COL17A1Q9UMD9 1497 aaPredicted RBP38.39■■■■□ 3.74
RHBDF1-208ENST00000482904 HECW1Q76N89 1606 aa38.36■■■■□ 3.73
RHBDF1-208ENST00000482904 PLEKHD1A6NEE1 506 aa38.34■■■■□ 3.73
RHBDF1-208ENST00000482904 ATP1B4Q9UN42 357 aaPredicted RBP38.34■■■■□ 3.73
RHBDF1-208ENST00000482904 CDK13Q14004 1512 aaKnown RBP38.33■■■■□ 3.73
RHBDF1-208ENST00000482904 CLIP1P30622 1438 aa38.17■■■■□ 3.7
RHBDF1-208ENST00000482904 NEO1Q92859 1461 aa38.15■■■■□ 3.7
RHBDF1-208ENST00000482904 ARAP3Q8WWN8 1544 aa38.14■■■■□ 3.7
RHBDF1-208ENST00000482904 PHLDB1Q86UU1 1377 aa38.14■■■■□ 3.7
RHBDF1-208ENST00000482904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.13■■■■□ 3.69
RHBDF1-208ENST00000482904 PCF11O94913 1555 aaKnown RBP38.12■■■■□ 3.69
RHBDF1-208ENST00000482904 TTC37Q6PGP7 1564 aa38.11■■■■□ 3.69
RHBDF1-208ENST00000482904 CDK11AQ9UQ88 783 aaPredicted RBP38.11■■■■□ 3.69
RHBDF1-208ENST00000482904 CASKIN1Q8WXD9 1431 aa38.07■■■■□ 3.69
RHBDF1-208ENST00000482904 CFAP74Q9C0B2 1584 aa38.03■■■■□ 3.68
RHBDF1-208ENST00000482904 CCDC18Q5T9S5 1454 aa38.03■■■■□ 3.68
RHBDF1-208ENST00000482904 FANCAO15360 1455 aa38.02■■■■□ 3.68
RHBDF1-208ENST00000482904 KDM4FA0A1W2PPD8 638 aa38.01■■■■□ 3.68
RHBDF1-208ENST00000482904 LRRIQ1Q96JM4 1722 aa38.01■■■■□ 3.67
RHBDF1-208ENST00000482904 FYCO1Q9BQS8 1478 aa38■■■■□ 3.67
RHBDF1-208ENST00000482904 KIF14Q15058 1648 aa37.99■■■■□ 3.67
RHBDF1-208ENST00000482904 TROQ12816 1431 aaPredicted RBP37.99■■■■□ 3.67
RHBDF1-208ENST00000482904 ADGRL1O94910 1474 aa37.97■■■■□ 3.67
RHBDF1-208ENST00000482904 RAPGEF3O95398 923 aa37.94■■■■□ 3.66
RHBDF1-208ENST00000482904 AKNAQ7Z591 1439 aa37.94■■■■□ 3.66
RHBDF1-208ENST00000482904 FRMPD1Q5SYB0 1578 aa37.89■■■■□ 3.66
RHBDF1-208ENST00000482904 CEP162Q5TB80 1403 aa37.89■■■■□ 3.66
RHBDF1-208ENST00000482904 DENND4BO75064 1496 aaPredicted RBP37.89■■■■□ 3.66
RHBDF1-208ENST00000482904 PLCH2O75038 1416 aa37.88■■■■□ 3.66
RHBDF1-208ENST00000482904 MYO5CQ9NQX4 1742 aa37.87■■■■□ 3.65
RHBDF1-208ENST00000482904 RICTORQ6R327 1708 aa37.78■■■■□ 3.64
RHBDF1-208ENST00000482904 ARHGAP5Q13017 1502 aa37.77■■■■□ 3.64
RHBDF1-208ENST00000482904 EFCAB2Q5VUJ9 269 aa37.76■■■■□ 3.64
RHBDF1-208ENST00000482904 SCAPERQ9BY12 1400 aa37.73■■■■□ 3.63
RHBDF1-208ENST00000482904 ARHGEF40Q8TER5 1519 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms