RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
NELFCD-208ENST00000482747 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
NELFCD-208ENST00000482747 CHIC1Q5VXU3 224 aa28.66■■■□□ 2.18
NELFCD-208ENST00000482747 KIAA0586Q9BVV6 1533 aa28.65■■■□□ 2.18
NELFCD-208ENST00000482747 RAPGEF2Q9Y4G8 1499 aa28.64■■■□□ 2.18
NELFCD-208ENST00000482747 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
NELFCD-208ENST00000482747 CSRNP3Q8WYN3 585 aa28.52■■■□□ 2.16
NELFCD-208ENST00000482747 PRXQ9BXM0 1461 aa28.51■■■□□ 2.16
NELFCD-208ENST00000482747 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
NELFCD-208ENST00000482747 TTBK1Q5TCY1 1321 aaPredicted RBP28.49■■■□□ 2.15
NELFCD-208ENST00000482747 TRHP20396 242 aaPredicted RBP28.43■■■□□ 2.14
NELFCD-208ENST00000482747 EEA1Q15075 1411 aa28.38■■■□□ 2.13
NELFCD-208ENST00000482747 CTTNBP2Q8WZ74 1663 aa28.34■■■□□ 2.13
NELFCD-208ENST00000482747 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
NELFCD-208ENST00000482747 DISP1Q96F81 1524 aa28.34■■■□□ 2.13
NELFCD-208ENST00000482747 EHMT2Q96KQ7 1210 aa28.34■■■□□ 2.13
NELFCD-208ENST00000482747 PTPRGP23470 1445 aa28.31■■■□□ 2.12
NELFCD-208ENST00000482747 UGGT2Q9NYU1 1516 aa28.3■■■□□ 2.12
NELFCD-208ENST00000482747 TNIKQ9UKE5 1360 aa28.29■■■□□ 2.12
NELFCD-208ENST00000482747 ADCY10Q96PN6 1610 aa28.25■■■□□ 2.11
NELFCD-208ENST00000482747 KIAA0556O60303 1618 aa28.23■■■□□ 2.11
NELFCD-208ENST00000482747 RANGAP1P46060 587 aaPredicted RBP28.22■■■□□ 2.11
NELFCD-208ENST00000482747 P3H3Q8IVL6 736 aa28.18■■■□□ 2.1
NELFCD-208ENST00000482747 NPM1P06748 294 aaKnown RBP eCLIP28.18■■■□□ 2.1
NELFCD-208ENST00000482747 KIF21BO75037 1637 aa28.14■■■□□ 2.1
NELFCD-208ENST00000482747 GOLGA3Q08378 1498 aa28.11■■■□□ 2.09
NELFCD-208ENST00000482747 UACAQ9BZF9 1416 aa28.1■■■□□ 2.09
NELFCD-208ENST00000482747 UBTFP17480 764 aaKnown RBP28.07■■■□□ 2.08
NELFCD-208ENST00000482747 PLB1Q6P1J6 1458 aa28.05■■■□□ 2.08
NELFCD-208ENST00000482747 ABCC2Q92887 1545 aa28.03■■■□□ 2.08
NELFCD-208ENST00000482747 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
NELFCD-208ENST00000482747 MAPKBP1O60336 1514 aa28.01■■■□□ 2.07
NELFCD-208ENST00000482747 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
NELFCD-208ENST00000482747 SAMD9Q5K651 1589 aa27.98■■■□□ 2.07
NELFCD-208ENST00000482747 KIF13AQ9H1H9 1805 aa27.98■■■□□ 2.07
NELFCD-208ENST00000482747 ARID3CA6NKF2 412 aa27.95■■■□□ 2.06
NELFCD-208ENST00000482747 ABCC10Q5T3U5 1492 aa27.95■■■□□ 2.06
NELFCD-208ENST00000482747 FHOD3Q2V2M9 1422 aa27.93■■■□□ 2.06
NELFCD-208ENST00000482747 ASXL2Q76L83 1435 aa27.92■■■□□ 2.06
NELFCD-208ENST00000482747 KDM5BQ9UGL1 1544 aa27.92■■■□□ 2.06
NELFCD-208ENST00000482747 ABCA8O94911 1581 aa27.92■■■□□ 2.06
NELFCD-208ENST00000482747 DIP2BQ9P265 1576 aa27.9■■■□□ 2.06
NELFCD-208ENST00000482747 ZCCHC11Q5TAX3 1644 aaKnown RBP27.9■■■□□ 2.06
NELFCD-208ENST00000482747 EFCAB5A4FU69 1503 aa27.78■■■□□ 2.04
NELFCD-208ENST00000482747 TSPOAP1O95153 1857 aa27.77■■■□□ 2.04
NELFCD-208ENST00000482747 RAPGEF6Q8TEU7 1601 aa27.76■■■□□ 2.03
NELFCD-208ENST00000482747 ARHGAP35Q9NRY4 1499 aa27.75■■■□□ 2.03
NELFCD-208ENST00000482747 KCNH8Q96L42 1107 aa27.75■■■□□ 2.03
NELFCD-208ENST00000482747 ATP10BO94823 1461 aa27.74■■■□□ 2.03
NELFCD-208ENST00000482747 EPRSP07814 1512 aaKnown RBP27.73■■■□□ 2.03
NELFCD-208ENST00000482747 WDR7Q9Y4E6 1490 aa27.72■■■□□ 2.03
NELFCD-208ENST00000482747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.71■■■□□ 2.03
NELFCD-208ENST00000482747 HNRNPUL2Q1KMD3 747 aaKnown RBP27.71■■■□□ 2.03
NELFCD-208ENST00000482747 NUP153P49790 1475 aaKnown RBP27.7■■■□□ 2.02
NELFCD-208ENST00000482747 GLI2P10070 1586 aa27.66■■■□□ 2.02
NELFCD-208ENST00000482747 ATP1B4Q9UN42 357 aaPredicted RBP27.65■■■□□ 2.02
NELFCD-208ENST00000482747 LOC105371045A0A1W2PR82 267 aa27.6■■■□□ 2.01
NELFCD-208ENST00000482747 PPRC1Q5VV67 1664 aaKnown RBP27.59■■■□□ 2.01
NELFCD-208ENST00000482747 MAP3K4Q9Y6R4 1608 aa27.58■■■□□ 2
NELFCD-208ENST00000482747 FMN1Q68DA7 1419 aa27.57■■■□□ 2
NELFCD-208ENST00000482747 CDK13Q14004 1512 aaKnown RBP27.55■■■□□ 2
NELFCD-208ENST00000482747 CLIP1P30622 1438 aa27.54■■■□□ 2
NELFCD-208ENST00000482747 CD109Q6YHK3 1445 aa27.51■■□□□ 1.99
NELFCD-208ENST00000482747 KDM6BO15054 1643 aa27.49■■□□□ 1.99
NELFCD-208ENST00000482747 PLEKHD1A6NEE1 506 aa27.49■■□□□ 1.99
NELFCD-208ENST00000482747 HECW1Q76N89 1606 aa27.45■■□□□ 1.98
NELFCD-208ENST00000482747 CFAP43Q8NDM7 1665 aa27.44■■□□□ 1.98
NELFCD-208ENST00000482747 COL17A1Q9UMD9 1497 aaPredicted RBP27.43■■□□□ 1.98
NELFCD-208ENST00000482747 PCF11O94913 1555 aaKnown RBP27.42■■□□□ 1.98
NELFCD-208ENST00000482747 TEX14Q8IWB6 1497 aa27.42■■□□□ 1.98
NELFCD-208ENST00000482747 CEP162Q5TB80 1403 aa27.41■■□□□ 1.98
NELFCD-208ENST00000482747 LRRIQ1Q96JM4 1722 aa27.4■■□□□ 1.98
NELFCD-208ENST00000482747 ABCA9Q8IUA7 1624 aa27.38■■□□□ 1.97
NELFCD-208ENST00000482747 MAGI3Q5TCQ9 1506 aa27.38■■□□□ 1.97
NELFCD-208ENST00000482747 CASKIN1Q8WXD9 1431 aa27.37■■□□□ 1.97
NELFCD-208ENST00000482747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.31■■□□□ 1.96
NELFCD-208ENST00000482747 CDK11AQ9UQ88 783 aaPredicted RBP27.3■■□□□ 1.96
NELFCD-208ENST00000482747 TTC37Q6PGP7 1564 aa27.29■■□□□ 1.96
NELFCD-208ENST00000482747 FYCO1Q9BQS8 1478 aa27.28■■□□□ 1.96
NELFCD-208ENST00000482747 KIF14Q15058 1648 aa27.24■■□□□ 1.95
NELFCD-208ENST00000482747 TROQ12816 1431 aaPredicted RBP27.23■■□□□ 1.95
NELFCD-208ENST00000482747 CCDC18Q5T9S5 1454 aa27.22■■□□□ 1.95
NELFCD-208ENST00000482747 RAPGEF3O95398 923 aa27.19■■□□□ 1.94
NELFCD-208ENST00000482747 FANCAO15360 1455 aa27.15■■□□□ 1.94
NELFCD-208ENST00000482747 NEO1Q92859 1461 aa27.15■■□□□ 1.94
NELFCD-208ENST00000482747 ARAP3Q8WWN8 1544 aa27.15■■□□□ 1.94
NELFCD-208ENST00000482747 PLCH2O75038 1416 aa27.12■■□□□ 1.93
NELFCD-208ENST00000482747 AKNAQ7Z591 1439 aa27.11■■□□□ 1.93
NELFCD-208ENST00000482747 PHLDB1Q86UU1 1377 aa27.1■■□□□ 1.93
NELFCD-208ENST00000482747 MYO5CQ9NQX4 1742 aa27.08■■□□□ 1.92
NELFCD-208ENST00000482747 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
NELFCD-208ENST00000482747 FRMPD1Q5SYB0 1578 aa27.04■■□□□ 1.92
NELFCD-208ENST00000482747 EFCAB2Q5VUJ9 269 aa27.04■■□□□ 1.92
NELFCD-208ENST00000482747 MTUS2Q5JR59 1369 aa27.03■■□□□ 1.92
NELFCD-208ENST00000482747 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
NELFCD-208ENST00000482747 ARHGAP5Q13017 1502 aa27.02■■□□□ 1.92
NELFCD-208ENST00000482747 KDM4FA0A1W2PPD8 638 aa27.02■■□□□ 1.92
NELFCD-208ENST00000482747 CFAP74Q9C0B2 1584 aa27.02■■□□□ 1.92
NELFCD-208ENST00000482747 DENND4BO75064 1496 aaPredicted RBP27.02■■□□□ 1.92
NELFCD-208ENST00000482747 ADGRL1O94910 1474 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms