RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 NISCHQ9Y2I1 1504 aa41.4■■■■■ 4.22
NELFCD-208ENST00000482747 CCDC180Q9P1Z9 1646 aa36.73■■■■□ 3.47
NELFCD-208ENST00000482747 ABCC9O60706 1549 aa36.28■■■■□ 3.4
NELFCD-208ENST00000482747 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
NELFCD-208ENST00000482747 RB1CC1Q8TDY2 1594 aa34.68■■■■□ 3.14
NELFCD-208ENST00000482747 NACADO15069 1562 aa34.58■■■■□ 3.13
NELFCD-208ENST00000482747 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
NELFCD-208ENST00000482747 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.07
NELFCD-208ENST00000482747 DCAF1Q9Y4B6 1507 aa34.12■■■■□ 3.05
NELFCD-208ENST00000482747 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
NELFCD-208ENST00000482747 PABPN1Q86U42 306 aaKnown RBP eCLIP33.96■■■■□ 3.03
NELFCD-208ENST00000482747 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
NELFCD-208ENST00000482747 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
NELFCD-208ENST00000482747 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
NELFCD-208ENST00000482747 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
NELFCD-208ENST00000482747 EIF4G1Q04637 1599 aaKnown RBP32.81■■■□□ 2.84
NELFCD-208ENST00000482747 CC2D2AQ9P2K1 1620 aa32.73■■■□□ 2.83
NELFCD-208ENST00000482747 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
NELFCD-208ENST00000482747 SMARCA4P51532 1647 aa32.14■■■□□ 2.74
NELFCD-208ENST00000482747 BAZ1AQ9NRL2 1556 aaPredicted RBP32.05■■■□□ 2.72
NELFCD-208ENST00000482747 ATAD2BQ9ULI0 1458 aa32.01■■■□□ 2.71
NELFCD-208ENST00000482747 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
NELFCD-208ENST00000482747 NCAPD3P42695 1498 aa31.96■■■□□ 2.71
NELFCD-208ENST00000482747 SMARCA2P51531 1590 aa31.89■■■□□ 2.7
NELFCD-208ENST00000482747 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
NELFCD-208ENST00000482747 PEG3Q9GZU2 1588 aa31.75■■■□□ 2.67
NELFCD-208ENST00000482747 BAZ1BQ9UIG0 1483 aaKnown RBP31.74■■■□□ 2.67
NELFCD-208ENST00000482747 WIZO95785 1651 aa31.64■■■□□ 2.65
NELFCD-208ENST00000482747 RSF1Q96T23 1441 aaPredicted RBP31.56■■■□□ 2.64
NELFCD-208ENST00000482747 NESP48681 1621 aa31.39■■■□□ 2.61
NELFCD-208ENST00000482747 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
NELFCD-208ENST00000482747 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
NELFCD-208ENST00000482747 LAMC3Q9Y6N6 1575 aa31.1■■■□□ 2.57
NELFCD-208ENST00000482747 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
NELFCD-208ENST00000482747 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
NELFCD-208ENST00000482747 PDS5BQ9NTI5 1447 aa30.92■■■□□ 2.54
NELFCD-208ENST00000482747 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
NELFCD-208ENST00000482747 SUPT5HO00267 1087 aaKnown RBP30.85■■■□□ 2.53
NELFCD-208ENST00000482747 CFTRP13569 1480 aa30.84■■■□□ 2.53
NELFCD-208ENST00000482747 CUX2O14529 1486 aa30.8■■■□□ 2.52
NELFCD-208ENST00000482747 THOC2Q8NI27 1593 aaKnown RBP30.8■■■□□ 2.52
NELFCD-208ENST00000482747 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
NELFCD-208ENST00000482747 CEP164Q9UPV0 1460 aa30.67■■■□□ 2.5
NELFCD-208ENST00000482747 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.49
NELFCD-208ENST00000482747 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
NELFCD-208ENST00000482747 WDR62O43379 1518 aa30.51■■■□□ 2.48
NELFCD-208ENST00000482747 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.47
NELFCD-208ENST00000482747 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
NELFCD-208ENST00000482747 DNMBPQ6XZF7 1577 aa30.13■■■□□ 2.41
NELFCD-208ENST00000482747 DNAJC5Q9H3Z4 198 aa30.1■■■□□ 2.41
NELFCD-208ENST00000482747 ABCC8Q09428 1581 aa30.09■■■□□ 2.41
NELFCD-208ENST00000482747 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.39
NELFCD-208ENST00000482747 IFT140Q96RY7 1462 aa30■■■□□ 2.39
NELFCD-208ENST00000482747 CUX1P39880 1505 aa29.98■■■□□ 2.39
NELFCD-208ENST00000482747 POLA1P09884 1462 aaPredicted RBP29.97■■■□□ 2.39
NELFCD-208ENST00000482747 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
NELFCD-208ENST00000482747 FGD5Q6ZNL6 1462 aa29.89■■■□□ 2.38
NELFCD-208ENST00000482747 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
NELFCD-208ENST00000482747 SOGA1O94964 1423 aa29.85■■■□□ 2.37
NELFCD-208ENST00000482747 AQRO60306 1485 aaKnown RBP eCLIP29.83■■■□□ 2.374e-7■■■■□ 22.3
NELFCD-208ENST00000482747 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
NELFCD-208ENST00000482747 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
NELFCD-208ENST00000482747 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
NELFCD-208ENST00000482747 SYNJ1O43426 1573 aa29.7■■■□□ 2.35
NELFCD-208ENST00000482747 TOP2BQ02880 1626 aa29.63■■■□□ 2.33
NELFCD-208ENST00000482747 OSCARQ8IYS5 282 aa29.62■■■□□ 2.33
NELFCD-208ENST00000482747 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
NELFCD-208ENST00000482747 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
NELFCD-208ENST00000482747 FBLN2P98095 1184 aa29.56■■■□□ 2.32
NELFCD-208ENST00000482747 ABCA10Q8WWZ4 1543 aa29.53■■■□□ 2.32
NELFCD-208ENST00000482747 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
NELFCD-208ENST00000482747 GAPVD1Q14C86 1478 aa29.49■■■□□ 2.31
NELFCD-208ENST00000482747 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
NELFCD-208ENST00000482747 CHD1O14646 1710 aa29.46■■■□□ 2.31
NELFCD-208ENST00000482747 ABCA5Q8WWZ7 1642 aa29.43■■■□□ 2.3
NELFCD-208ENST00000482747 PBRM1Q86U86 1689 aa29.41■■■□□ 2.3
NELFCD-208ENST00000482747 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
NELFCD-208ENST00000482747 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
NELFCD-208ENST00000482747 SYNJ2O15056 1496 aa29.29■■■□□ 2.28
NELFCD-208ENST00000482747 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
NELFCD-208ENST00000482747 ADAMTS12P58397 1594 aa29.16■■■□□ 2.26
NELFCD-208ENST00000482747 RIMBP3CA6NJZ7 1639 aa29.15■■■□□ 2.26
NELFCD-208ENST00000482747 RIMBP3BA6NNM3 1639 aa29.15■■■□□ 2.26
NELFCD-208ENST00000482747 RIMBP3Q9UFD9 1639 aa29.15■■■□□ 2.26
NELFCD-208ENST00000482747 ERICH3Q5RHP9 1530 aa29.15■■■□□ 2.26
NELFCD-208ENST00000482747 ARHGEF11O15085 1522 aa29.14■■■□□ 2.25
NELFCD-208ENST00000482747 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
NELFCD-208ENST00000482747 GRIN2AQ12879 1464 aa29.11■■■□□ 2.25
NELFCD-208ENST00000482747 CLASP1Q7Z460 1538 aa29.09■■■□□ 2.25
NELFCD-208ENST00000482747 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
NELFCD-208ENST00000482747 IGF1RP08069 1367 aa29.04■■■□□ 2.24
NELFCD-208ENST00000482747 CEP170Q5SW79 1584 aa29■■■□□ 2.23
NELFCD-208ENST00000482747 CYB5RLQ6IPT4 315 aa28.98■■■□□ 2.23
NELFCD-208ENST00000482747 NUP160Q12769 1436 aa28.96■■■□□ 2.23
NELFCD-208ENST00000482747 RUSC2Q8N2Y8 1516 aa28.96■■■□□ 2.23
NELFCD-208ENST00000482747 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
NELFCD-208ENST00000482747 CARMIL1Q5VZK9 1371 aa28.86■■■□□ 2.21
NELFCD-208ENST00000482747 CUL7Q14999 1698 aa28.85■■■□□ 2.21
NELFCD-208ENST00000482747 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
NELFCD-208ENST00000482747 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms