RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 JPH4Q96JJ6 628 aa24.99■■□□□ 1.59
CCM2-215ENST00000482714 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
CCM2-215ENST00000482714 UBTFP17480 764 aaKnown RBP24.98■■□□□ 1.59
CCM2-215ENST00000482714 IQGAP2Q13576 1575 aa24.87■■□□□ 1.57
CCM2-215ENST00000482714 TNIKQ9UKE5 1360 aa24.86■■□□□ 1.57
CCM2-215ENST00000482714 EHMT2Q96KQ7 1210 aa24.85■■□□□ 1.57
CCM2-215ENST00000482714 CTTNBP2Q8WZ74 1663 aa24.83■■□□□ 1.57
CCM2-215ENST00000482714 SHROOM2Q13796 1616 aa24.83■■□□□ 1.57
CCM2-215ENST00000482714 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.56
CCM2-215ENST00000482714 UGGT2Q9NYU1 1516 aa24.8■■□□□ 1.56
CCM2-215ENST00000482714 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
CCM2-215ENST00000482714 CARMIL2Q6F5E8 1435 aa24.8■■□□□ 1.56
CCM2-215ENST00000482714 PRG4Q92954 1404 aaPredicted RBP24.8■■□□□ 1.56
CCM2-215ENST00000482714 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
CCM2-215ENST00000482714 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
CCM2-215ENST00000482714 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
CCM2-215ENST00000482714 DISP1Q96F81 1524 aa24.69■■□□□ 1.54
CCM2-215ENST00000482714 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
CCM2-215ENST00000482714 EFCAB5A4FU69 1503 aa24.64■■□□□ 1.53
CCM2-215ENST00000482714 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.53
CCM2-215ENST00000482714 PTPRGP23470 1445 aa24.62■■□□□ 1.53
CCM2-215ENST00000482714 KIAA0556O60303 1618 aa24.61■■□□□ 1.53
CCM2-215ENST00000482714 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
CCM2-215ENST00000482714 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
CCM2-215ENST00000482714 SAMD9Q5K651 1589 aa24.6■■□□□ 1.53
CCM2-215ENST00000482714 CLIP1P30622 1438 aa24.58■■□□□ 1.53
CCM2-215ENST00000482714 P3H3Q8IVL6 736 aa24.58■■□□□ 1.52
CCM2-215ENST00000482714 ARHGAP35Q9NRY4 1499 aa24.55■■□□□ 1.52
CCM2-215ENST00000482714 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
CCM2-215ENST00000482714 FMN1Q68DA7 1419 aa24.47■■□□□ 1.51
CCM2-215ENST00000482714 FHOD3Q2V2M9 1422 aa24.46■■□□□ 1.51
CCM2-215ENST00000482714 TTBK1Q5TCY1 1321 aaPredicted RBP24.45■■□□□ 1.51
CCM2-215ENST00000482714 UACAQ9BZF9 1416 aa24.45■■□□□ 1.5
CCM2-215ENST00000482714 UHRF1BP1LA0JNW5 1464 aa24.4■■□□□ 1.5
CCM2-215ENST00000482714 NPM1P06748 294 aaKnown RBP eCLIP24.38■■□□□ 1.49
CCM2-215ENST00000482714 ABCA8O94911 1581 aa24.34■■□□□ 1.49
CCM2-215ENST00000482714 PLB1Q6P1J6 1458 aa24.34■■□□□ 1.49
CCM2-215ENST00000482714 ABCC2Q92887 1545 aa24.33■■□□□ 1.48
CCM2-215ENST00000482714 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
CCM2-215ENST00000482714 RAPGEF6Q8TEU7 1601 aa24.27■■□□□ 1.48
CCM2-215ENST00000482714 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
CCM2-215ENST00000482714 KDM5BQ9UGL1 1544 aa24.26■■□□□ 1.47
CCM2-215ENST00000482714 ADCY10Q96PN6 1610 aa24.26■■□□□ 1.47
CCM2-215ENST00000482714 ATP1B4Q9UN42 357 aaPredicted RBP24.24■■□□□ 1.47
CCM2-215ENST00000482714 NUP153P49790 1475 aaKnown RBP24.22■■□□□ 1.47
CCM2-215ENST00000482714 ATP10BO94823 1461 aa24.21■■□□□ 1.47
CCM2-215ENST00000482714 FYCO1Q9BQS8 1478 aa24.21■■□□□ 1.47
CCM2-215ENST00000482714 CDK11AQ9UQ88 783 aaPredicted RBP24.19■■□□□ 1.46
CCM2-215ENST00000482714 TRHP20396 242 aaPredicted RBP24.19■■□□□ 1.46
CCM2-215ENST00000482714 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
CCM2-215ENST00000482714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.17■■□□□ 1.46
CCM2-215ENST00000482714 HNRNPUL2Q1KMD3 747 aaKnown RBP24.17■■□□□ 1.46
CCM2-215ENST00000482714 EPRSP07814 1512 aaKnown RBP24.15■■□□□ 1.46
CCM2-215ENST00000482714 PLEKHD1A6NEE1 506 aa24.15■■□□□ 1.46
CCM2-215ENST00000482714 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
CCM2-215ENST00000482714 PCF11O94913 1555 aaKnown RBP24.12■■□□□ 1.45
CCM2-215ENST00000482714 MAPKBP1O60336 1514 aa24.12■■□□□ 1.45
CCM2-215ENST00000482714 APLP2Q06481 763 aa24.11■■□□□ 1.45
CCM2-215ENST00000482714 ARID3CA6NKF2 412 aa24.1■■□□□ 1.45
CCM2-215ENST00000482714 ZCCHC11Q5TAX3 1644 aaKnown RBP24.09■■□□□ 1.45
CCM2-215ENST00000482714 ASXL2Q76L83 1435 aa24.07■■□□□ 1.44
CCM2-215ENST00000482714 MAP3K1Q13233 1512 aa24.07■■□□□ 1.44
CCM2-215ENST00000482714 CDK13Q14004 1512 aaKnown RBP24.02■■□□□ 1.44
CCM2-215ENST00000482714 WDR7Q9Y4E6 1490 aa24.02■■□□□ 1.43
CCM2-215ENST00000482714 KCNH8Q96L42 1107 aa23.98■■□□□ 1.43
CCM2-215ENST00000482714 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
CCM2-215ENST00000482714 TROQ12816 1431 aaPredicted RBP23.97■■□□□ 1.43
CCM2-215ENST00000482714 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
CCM2-215ENST00000482714 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
CCM2-215ENST00000482714 FAM69CQ0P6D2 419 aa23.94■■□□□ 1.42
CCM2-215ENST00000482714 TIAM1Q13009 1591 aa23.93■■□□□ 1.42
CCM2-215ENST00000482714 GLI2P10070 1586 aa23.9■■□□□ 1.42
CCM2-215ENST00000482714 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.41
CCM2-215ENST00000482714 KANK4Q5T7N3 995 aaPredicted RBP23.87■■□□□ 1.41
CCM2-215ENST00000482714 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
CCM2-215ENST00000482714 MAGI3Q5TCQ9 1506 aa23.85■■□□□ 1.41
CCM2-215ENST00000482714 EHBP1L1Q8N3D4 1523 aa23.85■■□□□ 1.41
CCM2-215ENST00000482714 DIP2BQ9P265 1576 aa23.84■■□□□ 1.41
CCM2-215ENST00000482714 CD109Q6YHK3 1445 aa23.8■■□□□ 1.4
CCM2-215ENST00000482714 KIF14Q15058 1648 aa23.79■■□□□ 1.4
CCM2-215ENST00000482714 ABCA9Q8IUA7 1624 aa23.79■■□□□ 1.4
CCM2-215ENST00000482714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.78■■□□□ 1.4
CCM2-215ENST00000482714 PLCH2O75038 1416 aa23.75■■□□□ 1.39
CCM2-215ENST00000482714 KIF13AQ9H1H9 1805 aa23.75■■□□□ 1.39
CCM2-215ENST00000482714 CCNB3Q8WWL7 1395 aa23.73■■□□□ 1.39
CCM2-215ENST00000482714 NCOA2Q15596 1464 aa23.73■■□□□ 1.39
CCM2-215ENST00000482714 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
CCM2-215ENST00000482714 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
CCM2-215ENST00000482714 MAP3K4Q9Y6R4 1608 aa23.72■■□□□ 1.39
CCM2-215ENST00000482714 EFCAB2Q5VUJ9 269 aa23.71■■□□□ 1.39
CCM2-215ENST00000482714 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.38
CCM2-215ENST00000482714 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
CCM2-215ENST00000482714 TEX14Q8IWB6 1497 aa23.69■■□□□ 1.38
CCM2-215ENST00000482714 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
CCM2-215ENST00000482714 TTC37Q6PGP7 1564 aa23.67■■□□□ 1.38
CCM2-215ENST00000482714 NEO1Q92859 1461 aa23.63■■□□□ 1.37
CCM2-215ENST00000482714 MYO5CQ9NQX4 1742 aa23.62■■□□□ 1.37
CCM2-215ENST00000482714 MIA2Q96PC5 1412 aa23.62■■□□□ 1.37
CCM2-215ENST00000482714 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
CCM2-215ENST00000482714 MYOM3Q5VTT5 1437 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms