RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.39
CCM2-215ENST00000482714 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
CCM2-215ENST00000482714 ABCC9O60706 1549 aa30.84■■■□□ 2.53
CCM2-215ENST00000482714 ZCCHC6Q5VYS8 1495 aaKnown RBP30.26■■■□□ 2.43
CCM2-215ENST00000482714 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
CCM2-215ENST00000482714 MYO15BQ96JP2 1530 aa30.09■■■□□ 2.41
CCM2-215ENST00000482714 DCAF1Q9Y4B6 1507 aa30.09■■■□□ 2.41
CCM2-215ENST00000482714 NACADO15069 1562 aa30.05■■■□□ 2.4
CCM2-215ENST00000482714 RB1CC1Q8TDY2 1594 aa29.93■■■□□ 2.38
CCM2-215ENST00000482714 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
CCM2-215ENST00000482714 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
CCM2-215ENST00000482714 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
CCM2-215ENST00000482714 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
CCM2-215ENST00000482714 SHROOM4Q9ULL8 1493 aa28.83■■■□□ 2.21
CCM2-215ENST00000482714 DNAJC5BQ9UF47 199 aa28.57■■■□□ 2.16
CCM2-215ENST00000482714 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
CCM2-215ENST00000482714 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.1
CCM2-215ENST00000482714 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
CCM2-215ENST00000482714 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
CCM2-215ENST00000482714 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
CCM2-215ENST00000482714 MROH2BQ7Z745 1585 aa27.89■■■□□ 2.06
CCM2-215ENST00000482714 RSF1Q96T23 1441 aaPredicted RBP27.81■■■□□ 2.04
CCM2-215ENST00000482714 ATAD2BQ9ULI0 1458 aa27.78■■■□□ 2.04
CCM2-215ENST00000482714 SMARCA2P51531 1590 aa27.78■■■□□ 2.04
CCM2-215ENST00000482714 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
CCM2-215ENST00000482714 NCAPD3P42695 1498 aa27.77■■■□□ 2.04
CCM2-215ENST00000482714 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
CCM2-215ENST00000482714 WIZO95785 1651 aa27.56■■■□□ 2
CCM2-215ENST00000482714 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
CCM2-215ENST00000482714 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
CCM2-215ENST00000482714 TOP2AP11388 1531 aaKnown RBP27.36■■□□□ 1.97
CCM2-215ENST00000482714 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
CCM2-215ENST00000482714 CADPSQ9ULU8 1353 aa26.98■■□□□ 1.91
CCM2-215ENST00000482714 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
CCM2-215ENST00000482714 CFTRP13569 1480 aa26.88■■□□□ 1.89
CCM2-215ENST00000482714 NESP48681 1621 aa26.8■■□□□ 1.88
CCM2-215ENST00000482714 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
CCM2-215ENST00000482714 ERCC6Q03468 1493 aa26.59■■□□□ 1.85
CCM2-215ENST00000482714 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
CCM2-215ENST00000482714 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
CCM2-215ENST00000482714 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
CCM2-215ENST00000482714 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
CCM2-215ENST00000482714 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
CCM2-215ENST00000482714 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
CCM2-215ENST00000482714 CUX2O14529 1486 aa26.33■■□□□ 1.81
CCM2-215ENST00000482714 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
CCM2-215ENST00000482714 WDR62O43379 1518 aa26.26■■□□□ 1.79
CCM2-215ENST00000482714 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
CCM2-215ENST00000482714 WRNQ14191 1432 aaPredicted RBP eCLIP26.21■■□□□ 1.79
CCM2-215ENST00000482714 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
CCM2-215ENST00000482714 TOPBP1Q92547 1522 aa26.2■■□□□ 1.78
CCM2-215ENST00000482714 CUX1P39880 1505 aa26.13■■□□□ 1.77
CCM2-215ENST00000482714 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
CCM2-215ENST00000482714 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
CCM2-215ENST00000482714 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
CCM2-215ENST00000482714 SYNJ1O43426 1573 aa26■■□□□ 1.75
CCM2-215ENST00000482714 FGD5Q6ZNL6 1462 aa26■■□□□ 1.75
CCM2-215ENST00000482714 SOGA1O94964 1423 aa25.99■■□□□ 1.75
CCM2-215ENST00000482714 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
CCM2-215ENST00000482714 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
CCM2-215ENST00000482714 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
CCM2-215ENST00000482714 DNAJC5Q9H3Z4 198 aa25.86■■□□□ 1.73
CCM2-215ENST00000482714 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
CCM2-215ENST00000482714 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
CCM2-215ENST00000482714 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
CCM2-215ENST00000482714 WDR97A6NE52 1622 aa25.76■■□□□ 1.71
CCM2-215ENST00000482714 TDRD9Q8NDG6 1382 aaKnown RBP25.74■■□□□ 1.71
CCM2-215ENST00000482714 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
CCM2-215ENST00000482714 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.7
CCM2-215ENST00000482714 KIF27Q86VH2 1401 aa25.67■■□□□ 1.7
CCM2-215ENST00000482714 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
CCM2-215ENST00000482714 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
CCM2-215ENST00000482714 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
CCM2-215ENST00000482714 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
CCM2-215ENST00000482714 EEA1Q15075 1411 aa25.53■■□□□ 1.68
CCM2-215ENST00000482714 IGF1RP08069 1367 aa25.53■■□□□ 1.68
CCM2-215ENST00000482714 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
CCM2-215ENST00000482714 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
CCM2-215ENST00000482714 RUSC2Q8N2Y8 1516 aa25.45■■□□□ 1.67
CCM2-215ENST00000482714 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.66
CCM2-215ENST00000482714 SNAPC4Q5SXM2 1469 aa25.42■■□□□ 1.66
CCM2-215ENST00000482714 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
CCM2-215ENST00000482714 FHAD1B1AJZ9 1412 aa25.41■■□□□ 1.66
CCM2-215ENST00000482714 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
CCM2-215ENST00000482714 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
CCM2-215ENST00000482714 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
CCM2-215ENST00000482714 FBLN2P98095 1184 aa25.34■■□□□ 1.65
CCM2-215ENST00000482714 CUL7Q14999 1698 aa25.33■■□□□ 1.64
CCM2-215ENST00000482714 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
CCM2-215ENST00000482714 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
CCM2-215ENST00000482714 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
CCM2-215ENST00000482714 PRXQ9BXM0 1461 aa25.26■■□□□ 1.63
CCM2-215ENST00000482714 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
CCM2-215ENST00000482714 GRIN2AQ12879 1464 aa25.23■■□□□ 1.63
CCM2-215ENST00000482714 CHD1O14646 1710 aa25.16■■□□□ 1.62
CCM2-215ENST00000482714 NUP160Q12769 1436 aa25.14■■□□□ 1.61
CCM2-215ENST00000482714 KIF21BO75037 1637 aa25.09■■□□□ 1.61
CCM2-215ENST00000482714 KIAA0586Q9BVV6 1533 aa25.04■■□□□ 1.6
CCM2-215ENST00000482714 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
CCM2-215ENST00000482714 GOLGA3Q08378 1498 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms