RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
HMGN1-213ENST00000482192 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
HMGN1-213ENST00000482192 PRG4Q92954 1404 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-213ENST00000482192 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
HMGN1-213ENST00000482192 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
HMGN1-213ENST00000482192 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-213ENST00000482192 IQGAP2Q13576 1575 aa20.1■□□□□ 0.81
HMGN1-213ENST00000482192 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
HMGN1-213ENST00000482192 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
HMGN1-213ENST00000482192 EEA1Q15075 1411 aa19.99■□□□□ 0.79
HMGN1-213ENST00000482192 UGGT2Q9NYU1 1516 aa19.98■□□□□ 0.79
HMGN1-213ENST00000482192 TNIKQ9UKE5 1360 aa19.97■□□□□ 0.79
HMGN1-213ENST00000482192 PTPRGP23470 1445 aa19.97■□□□□ 0.79
HMGN1-213ENST00000482192 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
HMGN1-213ENST00000482192 CTTNBP2Q8WZ74 1663 aa19.96■□□□□ 0.79
HMGN1-213ENST00000482192 DISP1Q96F81 1524 aa19.96■□□□□ 0.79
HMGN1-213ENST00000482192 ADCY10Q96PN6 1610 aa19.95■□□□□ 0.78
HMGN1-213ENST00000482192 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
HMGN1-213ENST00000482192 KIAA0556O60303 1618 aa19.91■□□□□ 0.78
HMGN1-213ENST00000482192 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
HMGN1-213ENST00000482192 MAPKBP1O60336 1514 aa19.89■□□□□ 0.77
HMGN1-213ENST00000482192 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
HMGN1-213ENST00000482192 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
HMGN1-213ENST00000482192 UHRF1BP1LA0JNW5 1464 aa19.84■□□□□ 0.77
HMGN1-213ENST00000482192 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
HMGN1-213ENST00000482192 ABCC2Q92887 1545 aa19.83■□□□□ 0.77
HMGN1-213ENST00000482192 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
HMGN1-213ENST00000482192 ABCC10Q5T3U5 1492 aa19.81■□□□□ 0.76
HMGN1-213ENST00000482192 KIF13AQ9H1H9 1805 aa19.79■□□□□ 0.76
HMGN1-213ENST00000482192 KIF21BO75037 1637 aa19.78■□□□□ 0.76
HMGN1-213ENST00000482192 DIP2BQ9P265 1576 aa19.77■□□□□ 0.76
HMGN1-213ENST00000482192 FAM69CQ0P6D2 419 aa19.75■□□□□ 0.75
HMGN1-213ENST00000482192 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
HMGN1-213ENST00000482192 PLB1Q6P1J6 1458 aa19.73■□□□□ 0.75
HMGN1-213ENST00000482192 SAMD9Q5K651 1589 aa19.71■□□□□ 0.75
HMGN1-213ENST00000482192 ASXL2Q76L83 1435 aa19.71■□□□□ 0.75
HMGN1-213ENST00000482192 ABCA8O94911 1581 aa19.7■□□□□ 0.74
HMGN1-213ENST00000482192 ZCCHC11Q5TAX3 1644 aaKnown RBP19.69■□□□□ 0.74
HMGN1-213ENST00000482192 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
HMGN1-213ENST00000482192 GLI2P10070 1586 aa19.63■□□□□ 0.73
HMGN1-213ENST00000482192 RANGAP1P46060 587 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-213ENST00000482192 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
HMGN1-213ENST00000482192 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
HMGN1-213ENST00000482192 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
HMGN1-213ENST00000482192 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
HMGN1-213ENST00000482192 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
HMGN1-213ENST00000482192 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
HMGN1-213ENST00000482192 RAPGEF6Q8TEU7 1601 aa19.56■□□□□ 0.72
HMGN1-213ENST00000482192 TSPOAP1O95153 1857 aa19.54■□□□□ 0.72
HMGN1-213ENST00000482192 MAP3K4Q9Y6R4 1608 aa19.53■□□□□ 0.72
HMGN1-213ENST00000482192 ATP10BO94823 1461 aa19.52■□□□□ 0.72
HMGN1-213ENST00000482192 KDM6BO15054 1643 aa19.51■□□□□ 0.71
HMGN1-213ENST00000482192 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
HMGN1-213ENST00000482192 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
HMGN1-213ENST00000482192 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
HMGN1-213ENST00000482192 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
HMGN1-213ENST00000482192 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
HMGN1-213ENST00000482192 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
HMGN1-213ENST00000482192 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
HMGN1-213ENST00000482192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-213ENST00000482192 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
HMGN1-213ENST00000482192 FMN1Q68DA7 1419 aa19.42■□□□□ 0.7
HMGN1-213ENST00000482192 CD109Q6YHK3 1445 aa19.42■□□□□ 0.7
HMGN1-213ENST00000482192 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
HMGN1-213ENST00000482192 ABCA9Q8IUA7 1624 aa19.37■□□□□ 0.69
HMGN1-213ENST00000482192 HECW1Q76N89 1606 aa19.36■□□□□ 0.69
HMGN1-213ENST00000482192 PLEKHD1A6NEE1 506 aa19.35■□□□□ 0.69
HMGN1-213ENST00000482192 COL17A1Q9UMD9 1497 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-213ENST00000482192 CDK13Q14004 1512 aaKnown RBP19.32■□□□□ 0.68
HMGN1-213ENST00000482192 ATP1B4Q9UN42 357 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-213ENST00000482192 CLIP1P30622 1438 aa19.29■□□□□ 0.68
HMGN1-213ENST00000482192 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
HMGN1-213ENST00000482192 ARAP3Q8WWN8 1544 aa19.25■□□□□ 0.67
HMGN1-213ENST00000482192 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
HMGN1-213ENST00000482192 PCF11O94913 1555 aaKnown RBP19.24■□□□□ 0.67
HMGN1-213ENST00000482192 NEO1Q92859 1461 aa19.24■□□□□ 0.67
HMGN1-213ENST00000482192 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
HMGN1-213ENST00000482192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.24■□□□□ 0.67
HMGN1-213ENST00000482192 TTC37Q6PGP7 1564 aa19.21■□□□□ 0.67
HMGN1-213ENST00000482192 CCDC18Q5T9S5 1454 aa19.2■□□□□ 0.66
HMGN1-213ENST00000482192 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
HMGN1-213ENST00000482192 LRRIQ1Q96JM4 1722 aa19.18■□□□□ 0.66
HMGN1-213ENST00000482192 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
HMGN1-213ENST00000482192 FANCAO15360 1455 aa19.17■□□□□ 0.66
HMGN1-213ENST00000482192 CFAP74Q9C0B2 1584 aa19.17■□□□□ 0.66
HMGN1-213ENST00000482192 KIF14Q15058 1648 aa19.16■□□□□ 0.66
HMGN1-213ENST00000482192 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
HMGN1-213ENST00000482192 PLCH2O75038 1416 aa19.13■□□□□ 0.65
HMGN1-213ENST00000482192 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
HMGN1-213ENST00000482192 KDM4FA0A1W2PPD8 638 aa19.11■□□□□ 0.65
HMGN1-213ENST00000482192 RAPGEF3O95398 923 aa19.1■□□□□ 0.65
HMGN1-213ENST00000482192 FRMPD1Q5SYB0 1578 aa19.1■□□□□ 0.65
HMGN1-213ENST00000482192 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-213ENST00000482192 MYO5CQ9NQX4 1742 aa19.09■□□□□ 0.65
HMGN1-213ENST00000482192 ADGRL1O94910 1474 aa19.09■□□□□ 0.65
HMGN1-213ENST00000482192 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
HMGN1-213ENST00000482192 EFCAB2Q5VUJ9 269 aa19.05■□□□□ 0.64
HMGN1-213ENST00000482192 RICTORQ6R327 1708 aa19.05■□□□□ 0.64
HMGN1-213ENST00000482192 ARHGAP5Q13017 1502 aa19.04■□□□□ 0.64
HMGN1-213ENST00000482192 SCAPERQ9BY12 1400 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms