RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 JPH4Q96JJ6 628 aa31.79■■■□□ 2.68
HSPG2-210ENST00000481644 PRG4Q92954 1404 aaPredicted RBP31.77■■■□□ 2.68
HSPG2-210ENST00000481644 KIAA0586Q9BVV6 1533 aa31.77■■■□□ 2.68
HSPG2-210ENST00000481644 RAPGEF2Q9Y4G8 1499 aa31.7■■■□□ 2.66
HSPG2-210ENST00000481644 IQGAP2Q13576 1575 aa31.6■■■□□ 2.65
HSPG2-210ENST00000481644 TRHP20396 242 aaPredicted RBP31.52■■■□□ 2.64
HSPG2-210ENST00000481644 PRXQ9BXM0 1461 aa31.52■■■□□ 2.64
HSPG2-210ENST00000481644 CTTNBP2Q8WZ74 1663 aa31.47■■■□□ 2.63
HSPG2-210ENST00000481644 CARMIL2Q6F5E8 1435 aa31.46■■■□□ 2.63
HSPG2-210ENST00000481644 EEA1Q15075 1411 aa31.44■■■□□ 2.62
HSPG2-210ENST00000481644 CSRNP3Q8WYN3 585 aa31.42■■■□□ 2.62
HSPG2-210ENST00000481644 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
HSPG2-210ENST00000481644 UGGT2Q9NYU1 1516 aa31.39■■■□□ 2.62
HSPG2-210ENST00000481644 DISP1Q96F81 1524 aa31.36■■■□□ 2.61
HSPG2-210ENST00000481644 TNIKQ9UKE5 1360 aa31.36■■■□□ 2.61
HSPG2-210ENST00000481644 PTPRGP23470 1445 aa31.35■■■□□ 2.61
HSPG2-210ENST00000481644 ADCY10Q96PN6 1610 aa31.35■■■□□ 2.61
HSPG2-210ENST00000481644 TTBK1Q5TCY1 1321 aaPredicted RBP31.31■■■□□ 2.6
HSPG2-210ENST00000481644 KIAA0556O60303 1618 aa31.3■■■□□ 2.6
HSPG2-210ENST00000481644 FAM9AQ8IZU1 332 aaPredicted RBP31.29■■■□□ 2.6
HSPG2-210ENST00000481644 NPM1P06748 294 aaKnown RBP eCLIP31.26■■■□□ 2.59
HSPG2-210ENST00000481644 GOLGA3Q08378 1498 aa31.21■■■□□ 2.59
HSPG2-210ENST00000481644 MAPKBP1O60336 1514 aa31.18■■■□□ 2.58
HSPG2-210ENST00000481644 KIF21BO75037 1637 aa31.16■■■□□ 2.58
HSPG2-210ENST00000481644 UACAQ9BZF9 1416 aa31.15■■■□□ 2.58
HSPG2-210ENST00000481644 KIF13AQ9H1H9 1805 aa31.13■■■□□ 2.57
HSPG2-210ENST00000481644 UHRF1BP1LA0JNW5 1464 aa31.13■■■□□ 2.57
HSPG2-210ENST00000481644 ABCC2Q92887 1545 aa31.12■■■□□ 2.57
HSPG2-210ENST00000481644 ABCC10Q5T3U5 1492 aa31.05■■■□□ 2.56
HSPG2-210ENST00000481644 DIP2BQ9P265 1576 aa31.02■■■□□ 2.56
HSPG2-210ENST00000481644 SAMD9Q5K651 1589 aa31.01■■■□□ 2.56
HSPG2-210ENST00000481644 FAM69CQ0P6D2 419 aa30.99■■■□□ 2.55
HSPG2-210ENST00000481644 PLB1Q6P1J6 1458 aa30.99■■■□□ 2.55
HSPG2-210ENST00000481644 KDM5BQ9UGL1 1544 aa30.98■■■□□ 2.55
HSPG2-210ENST00000481644 P3H3Q8IVL6 736 aa30.97■■■□□ 2.55
HSPG2-210ENST00000481644 ZCCHC11Q5TAX3 1644 aaKnown RBP30.96■■■□□ 2.55
HSPG2-210ENST00000481644 ABCA8O94911 1581 aa30.96■■■□□ 2.55
HSPG2-210ENST00000481644 ASXL2Q76L83 1435 aa30.94■■■□□ 2.54
HSPG2-210ENST00000481644 RANGAP1P46060 587 aaPredicted RBP30.93■■■□□ 2.54
HSPG2-210ENST00000481644 EHMT2Q96KQ7 1210 aa30.93■■■□□ 2.54
HSPG2-210ENST00000481644 UBTFP17480 764 aaKnown RBP30.88■■■□□ 2.53
HSPG2-210ENST00000481644 EFCAB5A4FU69 1503 aa30.83■■■□□ 2.53
HSPG2-210ENST00000481644 TSPOAP1O95153 1857 aa30.81■■■□□ 2.52
HSPG2-210ENST00000481644 FHOD3Q2V2M9 1422 aa30.81■■■□□ 2.52
HSPG2-210ENST00000481644 GLI2P10070 1586 aa30.79■■■□□ 2.52
HSPG2-210ENST00000481644 RAPGEF6Q8TEU7 1601 aa30.78■■■□□ 2.52
HSPG2-210ENST00000481644 EPRSP07814 1512 aaKnown RBP30.76■■■□□ 2.51
HSPG2-210ENST00000481644 WDR7Q9Y4E6 1490 aa30.76■■■□□ 2.51
HSPG2-210ENST00000481644 ARID3CA6NKF2 412 aa30.7■■■□□ 2.51
HSPG2-210ENST00000481644 ATP10BO94823 1461 aa30.68■■■□□ 2.5
HSPG2-210ENST00000481644 MAP3K4Q9Y6R4 1608 aa30.66■■■□□ 2.5
HSPG2-210ENST00000481644 PPRC1Q5VV67 1664 aaKnown RBP30.65■■■□□ 2.5
HSPG2-210ENST00000481644 NUP153P49790 1475 aaKnown RBP30.63■■■□□ 2.49
HSPG2-210ENST00000481644 ARHGAP35Q9NRY4 1499 aa30.63■■■□□ 2.49
HSPG2-210ENST00000481644 KDM6BO15054 1643 aa30.6■■■□□ 2.49
HSPG2-210ENST00000481644 KCNH8Q96L42 1107 aa30.59■■■□□ 2.49
HSPG2-210ENST00000481644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.56■■■□□ 2.48
HSPG2-210ENST00000481644 HNRNPUL2Q1KMD3 747 aaKnown RBP30.56■■■□□ 2.48
HSPG2-210ENST00000481644 CFAP43Q8NDM7 1665 aa30.55■■■□□ 2.48
HSPG2-210ENST00000481644 FMN1Q68DA7 1419 aa30.54■■■□□ 2.48
HSPG2-210ENST00000481644 TEX14Q8IWB6 1497 aa30.53■■■□□ 2.48
HSPG2-210ENST00000481644 CD109Q6YHK3 1445 aa30.48■■■□□ 2.47
HSPG2-210ENST00000481644 HECW1Q76N89 1606 aa30.45■■■□□ 2.47
HSPG2-210ENST00000481644 MAGI3Q5TCQ9 1506 aa30.44■■■□□ 2.46
HSPG2-210ENST00000481644 ABCA9Q8IUA7 1624 aa30.43■■■□□ 2.46
HSPG2-210ENST00000481644 CDK13Q14004 1512 aaKnown RBP30.41■■■□□ 2.46
HSPG2-210ENST00000481644 PLEKHD1A6NEE1 506 aa30.4■■■□□ 2.46
HSPG2-210ENST00000481644 ATP1B4Q9UN42 357 aaPredicted RBP30.4■■■□□ 2.46
HSPG2-210ENST00000481644 CLIP1P30622 1438 aa30.37■■■□□ 2.45
HSPG2-210ENST00000481644 COL17A1Q9UMD9 1497 aaPredicted RBP30.34■■■□□ 2.45
HSPG2-210ENST00000481644 PCF11O94913 1555 aaKnown RBP30.3■■■□□ 2.44
HSPG2-210ENST00000481644 LRRIQ1Q96JM4 1722 aa30.29■■■□□ 2.44
HSPG2-210ENST00000481644 CASKIN1Q8WXD9 1431 aa30.26■■■□□ 2.43
HSPG2-210ENST00000481644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.24■■■□□ 2.43
HSPG2-210ENST00000481644 CDK11AQ9UQ88 783 aaPredicted RBP30.23■■■□□ 2.43
HSPG2-210ENST00000481644 TTC37Q6PGP7 1564 aa30.21■■■□□ 2.43
HSPG2-210ENST00000481644 FYCO1Q9BQS8 1478 aa30.2■■■□□ 2.43
HSPG2-210ENST00000481644 CEP162Q5TB80 1403 aa30.19■■■□□ 2.42
HSPG2-210ENST00000481644 CCDC18Q5T9S5 1454 aa30.19■■■□□ 2.42
HSPG2-210ENST00000481644 PHLDB1Q86UU1 1377 aa30.18■■■□□ 2.42
HSPG2-210ENST00000481644 ARAP3Q8WWN8 1544 aa30.18■■■□□ 2.42
HSPG2-210ENST00000481644 NEO1Q92859 1461 aa30.18■■■□□ 2.42
HSPG2-210ENST00000481644 TROQ12816 1431 aaPredicted RBP30.14■■■□□ 2.42
HSPG2-210ENST00000481644 KIF14Q15058 1648 aa30.14■■■□□ 2.41
HSPG2-210ENST00000481644 CFAP74Q9C0B2 1584 aa30.12■■■□□ 2.41
HSPG2-210ENST00000481644 LOC105371045A0A1W2PR82 267 aa30.12■■■□□ 2.41
HSPG2-210ENST00000481644 AEBP2Q6ZN18 517 aaPredicted RBP30.1■■■□□ 2.41
HSPG2-210ENST00000481644 FANCAO15360 1455 aa30.1■■■□□ 2.41
HSPG2-210ENST00000481644 MYO5CQ9NQX4 1742 aa30.08■■■□□ 2.41
HSPG2-210ENST00000481644 PLCH2O75038 1416 aa30.04■■■□□ 2.4
HSPG2-210ENST00000481644 AKNAQ7Z591 1439 aa30.04■■■□□ 2.4
HSPG2-210ENST00000481644 FRMPD1Q5SYB0 1578 aa30■■■□□ 2.39
HSPG2-210ENST00000481644 RAPGEF3O95398 923 aa30■■■□□ 2.39
HSPG2-210ENST00000481644 DENND4BO75064 1496 aaPredicted RBP29.97■■■□□ 2.39
HSPG2-210ENST00000481644 RICTORQ6R327 1708 aa29.96■■■□□ 2.39
HSPG2-210ENST00000481644 KDM4FA0A1W2PPD8 638 aa29.94■■■□□ 2.38
HSPG2-210ENST00000481644 ARHGAP5Q13017 1502 aa29.93■■■□□ 2.38
HSPG2-210ENST00000481644 ADGRL1O94910 1474 aa29.93■■■□□ 2.38
HSPG2-210ENST00000481644 EFCAB2Q5VUJ9 269 aa29.92■■■□□ 2.38
HSPG2-210ENST00000481644 CDC42BPBQ9Y5S2 1711 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms