RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 RUSC2Q8N2Y8 1516 aa31.23■■■□□ 2.59
RXRB-203ENST00000481441 ABCC10Q5T3U5 1492 aa31.19■■■□□ 2.58
RXRB-203ENST00000481441 MAPKBP1O60336 1514 aa31.16■■■□□ 2.58
RXRB-203ENST00000481441 FAM69CQ0P6D2 419 aa31.15■■■□□ 2.58
RXRB-203ENST00000481441 DIP2BQ9P265 1576 aa31.11■■■□□ 2.57
RXRB-203ENST00000481441 ADCY10Q96PN6 1610 aa31.11■■■□□ 2.57
RXRB-203ENST00000481441 NPM1P06748 294 aaKnown RBP eCLIP31.1■■■□□ 2.57
RXRB-203ENST00000481441 KIAA0586Q9BVV6 1533 aa31.01■■■□□ 2.55
RXRB-203ENST00000481441 KDM6BO15054 1643 aa30.96■■■□□ 2.55
RXRB-203ENST00000481441 IGF1RP08069 1367 aa30.93■■■□□ 2.54
RXRB-203ENST00000481441 TSPOAP1O95153 1857 aa30.92■■■□□ 2.54
RXRB-203ENST00000481441 CUL7Q14999 1698 aa30.9■■■□□ 2.54
RXRB-203ENST00000481441 KDM4FA0A1W2PPD8 638 aa30.89■■■□□ 2.54
RXRB-203ENST00000481441 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
RXRB-203ENST00000481441 PTPRGP23470 1445 aa30.8■■■□□ 2.52
RXRB-203ENST00000481441 ABCC2Q92887 1545 aa30.72■■■□□ 2.51
RXRB-203ENST00000481441 TNIKQ9UKE5 1360 aa30.69■■■□□ 2.5
RXRB-203ENST00000481441 CARMIL1Q5VZK9 1371 aa30.69■■■□□ 2.5
RXRB-203ENST00000481441 PPRC1Q5VV67 1664 aaKnown RBP30.68■■■□□ 2.5
RXRB-203ENST00000481441 CARMIL2Q6F5E8 1435 aa30.68■■■□□ 2.5
RXRB-203ENST00000481441 GLI2P10070 1586 aa30.67■■■□□ 2.5
RXRB-203ENST00000481441 ASXL2Q76L83 1435 aa30.67■■■□□ 2.5
RXRB-203ENST00000481441 TTBK1Q5TCY1 1321 aaPredicted RBP30.67■■■□□ 2.5
RXRB-203ENST00000481441 PLB1Q6P1J6 1458 aa30.64■■■□□ 2.5
RXRB-203ENST00000481441 IQGAP2Q13576 1575 aa30.62■■■□□ 2.49
RXRB-203ENST00000481441 UHRF1BP1LA0JNW5 1464 aa30.62■■■□□ 2.49
RXRB-203ENST00000481441 UACAQ9BZF9 1416 aa30.56■■■□□ 2.48
RXRB-203ENST00000481441 DISP1Q96F81 1524 aa30.54■■■□□ 2.48
RXRB-203ENST00000481441 ADGRL1O94910 1474 aa30.52■■■□□ 2.48
RXRB-203ENST00000481441 COL17A1Q9UMD9 1497 aaPredicted RBP30.5■■■□□ 2.47
RXRB-203ENST00000481441 KDM5BQ9UGL1 1544 aa30.49■■■□□ 2.47
RXRB-203ENST00000481441 MAP3K4Q9Y6R4 1608 aa30.49■■■□□ 2.47
RXRB-203ENST00000481441 EPRSP07814 1512 aaKnown RBP30.48■■■□□ 2.47
RXRB-203ENST00000481441 ILDR1Q86SU0 546 aaPredicted RBP30.46■■■□□ 2.47
RXRB-203ENST00000481441 UGGT2Q9NYU1 1516 aa30.43■■■□□ 2.46
RXRB-203ENST00000481441 ZCCHC11Q5TAX3 1644 aaKnown RBP30.42■■■□□ 2.46
RXRB-203ENST00000481441 TEX14Q8IWB6 1497 aa30.39■■■□□ 2.46
RXRB-203ENST00000481441 KIAA0556O60303 1618 aa30.37■■■□□ 2.45
RXRB-203ENST00000481441 RAPGEF2Q9Y4G8 1499 aa30.35■■■□□ 2.45
RXRB-203ENST00000481441 HECW2Q9P2P5 1572 aa30.28■■■□□ 2.44
RXRB-203ENST00000481441 WDR7Q9Y4E6 1490 aa30.28■■■□□ 2.44
RXRB-203ENST00000481441 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
RXRB-203ENST00000481441 CTTNBP2Q8WZ74 1663 aa30.17■■■□□ 2.42
RXRB-203ENST00000481441 MAGI3Q5TCQ9 1506 aa30.17■■■□□ 2.42
RXRB-203ENST00000481441 ABCA8O94911 1581 aa30.14■■■□□ 2.42
RXRB-203ENST00000481441 CD109Q6YHK3 1445 aa30.13■■■□□ 2.41
RXRB-203ENST00000481441 GOLGA3Q08378 1498 aa30.1■■■□□ 2.41
RXRB-203ENST00000481441 KCNH8Q96L42 1107 aa30.07■■■□□ 2.4
RXRB-203ENST00000481441 KIF21BO75037 1637 aa30.01■■■□□ 2.39
RXRB-203ENST00000481441 ARAP3Q8WWN8 1544 aa29.95■■■□□ 2.39
RXRB-203ENST00000481441 PRXQ9BXM0 1461 aa29.93■■■□□ 2.38
RXRB-203ENST00000481441 ATP10BO94823 1461 aa29.86■■■□□ 2.37
RXRB-203ENST00000481441 ABCA9Q8IUA7 1624 aa29.84■■■□□ 2.37
RXRB-203ENST00000481441 ARID3CA6NKF2 412 aa29.82■■■□□ 2.36
RXRB-203ENST00000481441 ADAMTSL3P82987 1691 aa29.82■■■□□ 2.36
RXRB-203ENST00000481441 PHLDB1Q86UU1 1377 aa29.8■■■□□ 2.36
RXRB-203ENST00000481441 PTPRMP28827 1452 aa29.78■■■□□ 2.36
RXRB-203ENST00000481441 P3H3Q8IVL6 736 aa29.76■■■□□ 2.36
RXRB-203ENST00000481441 FAM9AQ8IZU1 332 aaPredicted RBP29.76■■■□□ 2.36
RXRB-203ENST00000481441 FBXO41Q8TF61 875 aa29.73■■■□□ 2.35
RXRB-203ENST00000481441 RAPGEF3O95398 923 aa29.72■■■□□ 2.35
RXRB-203ENST00000481441 NEO1Q92859 1461 aa29.72■■■□□ 2.35
RXRB-203ENST00000481441 SAMD9Q5K651 1589 aa29.71■■■□□ 2.35
RXRB-203ENST00000481441 FRMPD1Q5SYB0 1578 aa29.69■■■□□ 2.34
RXRB-203ENST00000481441 RAPGEF6Q8TEU7 1601 aa29.69■■■□□ 2.34
RXRB-203ENST00000481441 BCORL1Q5H9F3 1711 aa29.69■■■□□ 2.34
RXRB-203ENST00000481441 MADDQ8WXG6 1647 aa29.63■■■□□ 2.33
RXRB-203ENST00000481441 PCF11O94913 1555 aaKnown RBP29.59■■■□□ 2.33
RXRB-203ENST00000481441 NUP153P49790 1475 aaKnown RBP29.59■■■□□ 2.33
RXRB-203ENST00000481441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.57■■■□□ 2.32
RXRB-203ENST00000481441 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
RXRB-203ENST00000481441 ARID4BQ4LE39 1312 aaPredicted RBP29.57■■■□□ 2.32
RXRB-203ENST00000481441 LMTK3Q96Q04 1460 aa29.56■■■□□ 2.32
RXRB-203ENST00000481441 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
RXRB-203ENST00000481441 RICTORQ6R327 1708 aa29.53■■■□□ 2.32
RXRB-203ENST00000481441 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
RXRB-203ENST00000481441 RIMS1Q86UR5 1692 aaKnown RBP29.51■■■□□ 2.31
RXRB-203ENST00000481441 DENND4BO75064 1496 aaPredicted RBP29.5■■■□□ 2.31
RXRB-203ENST00000481441 FHOD3Q2V2M9 1422 aa29.46■■■□□ 2.31
RXRB-203ENST00000481441 AKNAQ7Z591 1439 aa29.46■■■□□ 2.31
RXRB-203ENST00000481441 CFAP74Q9C0B2 1584 aa29.44■■■□□ 2.3
RXRB-203ENST00000481441 PLEKHD1A6NEE1 506 aa29.44■■■□□ 2.3
RXRB-203ENST00000481441 FANCAO15360 1455 aa29.43■■■□□ 2.3
RXRB-203ENST00000481441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.42■■■□□ 2.3
RXRB-203ENST00000481441 ZMYM4Q5VZL5 1548 aa29.41■■■□□ 2.3
RXRB-203ENST00000481441 SIGLEC1Q9BZZ2 1709 aa29.4■■■□□ 2.3
RXRB-203ENST00000481441 TTC37Q6PGP7 1564 aa29.38■■■□□ 2.29
RXRB-203ENST00000481441 RANGAP1P46060 587 aaPredicted RBP29.38■■■□□ 2.29
RXRB-203ENST00000481441 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
RXRB-203ENST00000481441 ZFYVE16Q7Z3T8 1539 aa29.36■■■□□ 2.29
RXRB-203ENST00000481441 HSPA2P54652 639 aa29.35■■■□□ 2.29
RXRB-203ENST00000481441 YEATS2Q9ULM3 1422 aa29.34■■■□□ 2.29
RXRB-203ENST00000481441 EFCAB5A4FU69 1503 aa29.34■■■□□ 2.29
RXRB-203ENST00000481441 MAGI2Q86UL8 1455 aa29.32■■■□□ 2.28
RXRB-203ENST00000481441 EEA1Q15075 1411 aa29.31■■■□□ 2.28
RXRB-203ENST00000481441 HECW1Q76N89 1606 aa29.29■■■□□ 2.28
RXRB-203ENST00000481441 PLPPR3Q6T4P5 718 aa29.28■■■□□ 2.28
RXRB-203ENST00000481441 FER1L4A9Z1Z3 1794 aa29.27■■■□□ 2.28
RXRB-203ENST00000481441 CDK13Q14004 1512 aaKnown RBP29.24■■■□□ 2.27
RXRB-203ENST00000481441 MLECQ14165 292 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 570.1 ms