RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RIMBP3CA6NJZ7 1639 aa32.77■■■□□ 2.84
LIME1-205ENST00000480139 RIMBP3BA6NNM3 1639 aa32.77■■■□□ 2.84
LIME1-205ENST00000480139 RIMBP3Q9UFD9 1639 aa32.77■■■□□ 2.84
LIME1-205ENST00000480139 FAM9AQ8IZU1 332 aaPredicted RBP32.77■■■□□ 2.84
LIME1-205ENST00000480139 KIF21BO75037 1637 aa32.76■■■□□ 2.83
LIME1-205ENST00000480139 CTTNBP2Q8WZ74 1663 aa32.71■■■□□ 2.83
LIME1-205ENST00000480139 IQGAP2Q13576 1575 aa32.7■■■□□ 2.82
LIME1-205ENST00000480139 JPH4Q96JJ6 628 aa32.63■■■□□ 2.81
LIME1-205ENST00000480139 PRG4Q92954 1404 aaPredicted RBP32.58■■■□□ 2.81
LIME1-205ENST00000480139 ERCC6L2Q5T890 1561 aa32.57■■■□□ 2.8
LIME1-205ENST00000480139 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
LIME1-205ENST00000480139 UGGT2Q9NYU1 1516 aa32.54■■■□□ 2.8
LIME1-205ENST00000480139 GOLGA3Q08378 1498 aa32.54■■■□□ 2.8
LIME1-205ENST00000480139 CARMIL2Q6F5E8 1435 aa32.43■■■□□ 2.78
LIME1-205ENST00000480139 DISP1Q96F81 1524 aa32.42■■■□□ 2.78
LIME1-205ENST00000480139 KIAA0556O60303 1618 aa32.38■■■□□ 2.77
LIME1-205ENST00000480139 CYB5RLQ6IPT4 315 aa32.36■■■□□ 2.77
LIME1-205ENST00000480139 UBTFP17480 764 aaKnown RBP32.31■■■□□ 2.76
LIME1-205ENST00000480139 SAMD9Q5K651 1589 aa32.3■■■□□ 2.76
LIME1-205ENST00000480139 TNIKQ9UKE5 1360 aa32.3■■■□□ 2.76
LIME1-205ENST00000480139 EHMT2Q96KQ7 1210 aa32.25■■■□□ 2.75
LIME1-205ENST00000480139 EFCAB5A4FU69 1503 aa32.22■■■□□ 2.75
LIME1-205ENST00000480139 PTPRGP23470 1445 aa32.22■■■□□ 2.75
LIME1-205ENST00000480139 ADCY10Q96PN6 1610 aa32.1■■■□□ 2.73
LIME1-205ENST00000480139 UHRF1BP1LA0JNW5 1464 aa32.06■■■□□ 2.72
LIME1-205ENST00000480139 UACAQ9BZF9 1416 aa32.05■■■□□ 2.72
LIME1-205ENST00000480139 RANGAP1P46060 587 aaPredicted RBP32.04■■■□□ 2.72
LIME1-205ENST00000480139 ARHGAP35Q9NRY4 1499 aa32.03■■■□□ 2.72
LIME1-205ENST00000480139 ABCC2Q92887 1545 aa32.03■■■□□ 2.72
LIME1-205ENST00000480139 TTBK1Q5TCY1 1321 aaPredicted RBP32.02■■■□□ 2.72
LIME1-205ENST00000480139 P3H3Q8IVL6 736 aa32.02■■■□□ 2.72
LIME1-205ENST00000480139 FHOD3Q2V2M9 1422 aa32.01■■■□□ 2.72
LIME1-205ENST00000480139 ABCA8O94911 1581 aa32.01■■■□□ 2.71
LIME1-205ENST00000480139 PLB1Q6P1J6 1458 aa31.97■■■□□ 2.71
LIME1-205ENST00000480139 LOC105371045A0A1W2PR82 267 aa31.93■■■□□ 2.7
LIME1-205ENST00000480139 CLIP1P30622 1438 aa31.92■■■□□ 2.7
LIME1-205ENST00000480139 KDM5BQ9UGL1 1544 aa31.9■■■□□ 2.7
LIME1-205ENST00000480139 RAPGEF6Q8TEU7 1601 aa31.89■■■□□ 2.7
LIME1-205ENST00000480139 MAPKBP1O60336 1514 aa31.87■■■□□ 2.69
LIME1-205ENST00000480139 FMN1Q68DA7 1419 aa31.87■■■□□ 2.69
LIME1-205ENST00000480139 NPM1P06748 294 aaKnown RBP eCLIP31.87■■■□□ 2.69
LIME1-205ENST00000480139 CEP162Q5TB80 1403 aa31.86■■■□□ 2.69
LIME1-205ENST00000480139 ZCCHC11Q5TAX3 1644 aaKnown RBP31.82■■■□□ 2.69
LIME1-205ENST00000480139 NUP153P49790 1475 aaKnown RBP31.76■■■□□ 2.67
LIME1-205ENST00000480139 HECW1Q76N89 1606 aa31.71■■■□□ 2.67
LIME1-205ENST00000480139 ATP10BO94823 1461 aa31.69■■■□□ 2.66
LIME1-205ENST00000480139 ASXL2Q76L83 1435 aa31.68■■■□□ 2.66
LIME1-205ENST00000480139 PCF11O94913 1555 aaKnown RBP31.65■■■□□ 2.66
LIME1-205ENST00000480139 CASKIN1Q8WXD9 1431 aa31.65■■■□□ 2.66
LIME1-205ENST00000480139 ABCC10Q5T3U5 1492 aa31.64■■■□□ 2.66
LIME1-205ENST00000480139 FYCO1Q9BQS8 1478 aa31.62■■■□□ 2.65
LIME1-205ENST00000480139 KIF13AQ9H1H9 1805 aa31.62■■■□□ 2.65
LIME1-205ENST00000480139 DIP2BQ9P265 1576 aa31.62■■■□□ 2.65
LIME1-205ENST00000480139 WDR7Q9Y4E6 1490 aa31.6■■■□□ 2.65
LIME1-205ENST00000480139 EPRSP07814 1512 aaKnown RBP31.58■■■□□ 2.65
LIME1-205ENST00000480139 TRHP20396 242 aaPredicted RBP31.57■■■□□ 2.64
LIME1-205ENST00000480139 LRRIQ1Q96JM4 1722 aa31.56■■■□□ 2.64
LIME1-205ENST00000480139 ARID3CA6NKF2 412 aa31.54■■■□□ 2.64
LIME1-205ENST00000480139 GLI2P10070 1586 aa31.54■■■□□ 2.64
LIME1-205ENST00000480139 CDK13Q14004 1512 aaKnown RBP31.54■■■□□ 2.64
LIME1-205ENST00000480139 CCDC18Q5T9S5 1454 aa31.52■■■□□ 2.64
LIME1-205ENST00000480139 VPS8Q8N3P4 1428 aa31.49■■■□□ 2.63
LIME1-205ENST00000480139 ATP1B4Q9UN42 357 aaPredicted RBP31.48■■■□□ 2.63
LIME1-205ENST00000480139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.47■■■□□ 2.63
LIME1-205ENST00000480139 HNRNPUL2Q1KMD3 747 aaKnown RBP31.47■■■□□ 2.63
LIME1-205ENST00000480139 FAM69CQ0P6D2 419 aa31.45■■■□□ 2.63
LIME1-205ENST00000480139 PLEKHD1A6NEE1 506 aa31.41■■■□□ 2.62
LIME1-205ENST00000480139 MAP3K4Q9Y6R4 1608 aa31.4■■■□□ 2.62
LIME1-205ENST00000480139 CDK11AQ9UQ88 783 aaPredicted RBP31.38■■■□□ 2.61
LIME1-205ENST00000480139 CFAP43Q8NDM7 1665 aa31.38■■■□□ 2.61
LIME1-205ENST00000480139 ABCA9Q8IUA7 1624 aa31.35■■■□□ 2.61
LIME1-205ENST00000480139 KCNH8Q96L42 1107 aa31.33■■■□□ 2.61
LIME1-205ENST00000480139 TROQ12816 1431 aaPredicted RBP31.32■■■□□ 2.6
LIME1-205ENST00000480139 PPRC1Q5VV67 1664 aaKnown RBP31.29■■■□□ 2.6
LIME1-205ENST00000480139 MAGI3Q5TCQ9 1506 aa31.28■■■□□ 2.6
LIME1-205ENST00000480139 TSPOAP1O95153 1857 aa31.27■■■□□ 2.6
LIME1-205ENST00000480139 KIF14Q15058 1648 aa31.27■■■□□ 2.6
LIME1-205ENST00000480139 TIAM1Q13009 1591 aa31.25■■■□□ 2.59
LIME1-205ENST00000480139 MAP3K1Q13233 1512 aa31.24■■■□□ 2.59
LIME1-205ENST00000480139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.24■■■□□ 2.59
LIME1-205ENST00000480139 CD109Q6YHK3 1445 aa31.24■■■□□ 2.59
LIME1-205ENST00000480139 TTC37Q6PGP7 1564 aa31.21■■■□□ 2.59
LIME1-205ENST00000480139 TEX14Q8IWB6 1497 aa31.21■■■□□ 2.59
LIME1-205ENST00000480139 EHBP1L1Q8N3D4 1523 aa31.18■■■□□ 2.58
LIME1-205ENST00000480139 MTUS2Q5JR59 1369 aa31.14■■■□□ 2.58
LIME1-205ENST00000480139 MYO5CQ9NQX4 1742 aa31.11■■■□□ 2.57
LIME1-205ENST00000480139 ARAP3Q8WWN8 1544 aa31.09■■■□□ 2.57
LIME1-205ENST00000480139 LRRC9Q6ZRR7 1453 aa31.08■■■□□ 2.57
LIME1-205ENST00000480139 PLCH2O75038 1416 aa31.06■■■□□ 2.56
LIME1-205ENST00000480139 CFAP74Q9C0B2 1584 aa31.05■■■□□ 2.56
LIME1-205ENST00000480139 NEO1Q92859 1461 aa31.04■■■□□ 2.56
LIME1-205ENST00000480139 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
LIME1-205ENST00000480139 APLP2Q06481 763 aa31.03■■■□□ 2.56
LIME1-205ENST00000480139 PREX2Q70Z35 1606 aa31.02■■■□□ 2.56
LIME1-205ENST00000480139 PHLDB1Q86UU1 1377 aa31.02■■■□□ 2.56
LIME1-205ENST00000480139 KDM6BO15054 1643 aa31.01■■■□□ 2.55
LIME1-205ENST00000480139 CDC42BPAQ5VT25 1732 aa31.01■■■□□ 2.55
LIME1-205ENST00000480139 FANCAO15360 1455 aa30.99■■■□□ 2.55
LIME1-205ENST00000480139 CDC42BPBQ9Y5S2 1711 aa30.98■■■□□ 2.55
LIME1-205ENST00000480139 NCOA2Q15596 1464 aa30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms