RNA–Protein interactions for RNA: ENST00000480060.5

CCHCR1-213, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-213ENST00000480060 CEP170Q5SW79 1584 aa17.34■□□□□ 0.37
CCHCR1-213ENST00000480060 ABCC10Q5T3U5 1492 aa17.3■□□□□ 0.36
CCHCR1-213ENST00000480060 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
CCHCR1-213ENST00000480060 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
CCHCR1-213ENST00000480060 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
CCHCR1-213ENST00000480060 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
CCHCR1-213ENST00000480060 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
CCHCR1-213ENST00000480060 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
CCHCR1-213ENST00000480060 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
CCHCR1-213ENST00000480060 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
CCHCR1-213ENST00000480060 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCHCR1-213ENST00000480060 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
CCHCR1-213ENST00000480060 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-213ENST00000480060 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
CCHCR1-213ENST00000480060 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
CCHCR1-213ENST00000480060 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
CCHCR1-213ENST00000480060 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-213ENST00000480060 ADAMTS12P58397 1594 aa17.18■□□□□ 0.34
CCHCR1-213ENST00000480060 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
CCHCR1-213ENST00000480060 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
CCHCR1-213ENST00000480060 CUL7Q14999 1698 aa17.15■□□□□ 0.34
CCHCR1-213ENST00000480060 KIF21BO75037 1637 aa17.14■□□□□ 0.33
CCHCR1-213ENST00000480060 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
CCHCR1-213ENST00000480060 KDM6BO15054 1643 aa17.11■□□□□ 0.33
CCHCR1-213ENST00000480060 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
CCHCR1-213ENST00000480060 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
CCHCR1-213ENST00000480060 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
CCHCR1-213ENST00000480060 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
CCHCR1-213ENST00000480060 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.3
CCHCR1-213ENST00000480060 FBXO41Q8TF61 875 aa16.94■□□□□ 0.3
CCHCR1-213ENST00000480060 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
CCHCR1-213ENST00000480060 PTPRGP23470 1445 aa16.93■□□□□ 0.3
CCHCR1-213ENST00000480060 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
CCHCR1-213ENST00000480060 HECW2Q9P2P5 1572 aa16.92■□□□□ 0.3
CCHCR1-213ENST00000480060 COL17A1Q9UMD9 1497 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-213ENST00000480060 CLIP1P30622 1438 aa16.9■□□□□ 0.3
CCHCR1-213ENST00000480060 PLB1Q6P1J6 1458 aa16.89■□□□□ 0.29
CCHCR1-213ENST00000480060 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
CCHCR1-213ENST00000480060 GLI2P10070 1586 aa16.88■□□□□ 0.29
CCHCR1-213ENST00000480060 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
CCHCR1-213ENST00000480060 IQGAP2Q13576 1575 aa16.86■□□□□ 0.29
CCHCR1-213ENST00000480060 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
CCHCR1-213ENST00000480060 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
CCHCR1-213ENST00000480060 PPRC1Q5VV67 1664 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-213ENST00000480060 UGGT2Q9NYU1 1516 aa16.81■□□□□ 0.28
CCHCR1-213ENST00000480060 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
CCHCR1-213ENST00000480060 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
CCHCR1-213ENST00000480060 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-213ENST00000480060 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
CCHCR1-213ENST00000480060 EFCAB5A4FU69 1503 aa16.77■□□□□ 0.28
CCHCR1-213ENST00000480060 EPRSP07814 1512 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-213ENST00000480060 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
CCHCR1-213ENST00000480060 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
CCHCR1-213ENST00000480060 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
CCHCR1-213ENST00000480060 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
CCHCR1-213ENST00000480060 SAMD9Q5K651 1589 aa16.71■□□□□ 0.27
CCHCR1-213ENST00000480060 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
CCHCR1-213ENST00000480060 MAP3K4Q9Y6R4 1608 aa16.69■□□□□ 0.26
CCHCR1-213ENST00000480060 FMN1Q68DA7 1419 aa16.69■□□□□ 0.26
CCHCR1-213ENST00000480060 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
CCHCR1-213ENST00000480060 KIAA0556O60303 1618 aa16.68■□□□□ 0.26
CCHCR1-213ENST00000480060 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-213ENST00000480060 APLP2Q06481 763 aa16.62■□□□□ 0.25
CCHCR1-213ENST00000480060 MAGI3Q5TCQ9 1506 aa16.61■□□□□ 0.25
CCHCR1-213ENST00000480060 CD109Q6YHK3 1445 aa16.61■□□□□ 0.25
CCHCR1-213ENST00000480060 CASKIN1Q8WXD9 1431 aa16.59■□□□□ 0.25
CCHCR1-213ENST00000480060 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
CCHCR1-213ENST00000480060 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.24
CCHCR1-213ENST00000480060 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
CCHCR1-213ENST00000480060 PTPRMP28827 1452 aa16.54■□□□□ 0.24
CCHCR1-213ENST00000480060 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
CCHCR1-213ENST00000480060 ZCCHC11Q5TAX3 1644 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-213ENST00000480060 ARID3CA6NKF2 412 aa16.52■□□□□ 0.24
CCHCR1-213ENST00000480060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-213ENST00000480060 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-213ENST00000480060 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-213ENST00000480060 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
CCHCR1-213ENST00000480060 SOCS7O14512 581 aa16.5■□□□□ 0.23
CCHCR1-213ENST00000480060 ABCA8O94911 1581 aa16.49■□□□□ 0.23
CCHCR1-213ENST00000480060 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-213ENST00000480060 RAPGEF6Q8TEU7 1601 aa16.48■□□□□ 0.23
CCHCR1-213ENST00000480060 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-213ENST00000480060 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
CCHCR1-213ENST00000480060 CDK11AQ9UQ88 783 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-213ENST00000480060 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
CCHCR1-213ENST00000480060 HECW1Q76N89 1606 aa16.46■□□□□ 0.23
CCHCR1-213ENST00000480060 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
CCHCR1-213ENST00000480060 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-213ENST00000480060 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
CCHCR1-213ENST00000480060 ADAMTSL3P82987 1691 aa16.45■□□□□ 0.22
CCHCR1-213ENST00000480060 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
CCHCR1-213ENST00000480060 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
CCHCR1-213ENST00000480060 ATP10BO94823 1461 aa16.43■□□□□ 0.22
CCHCR1-213ENST00000480060 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
CCHCR1-213ENST00000480060 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
CCHCR1-213ENST00000480060 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-213ENST00000480060 MTUS2Q5JR59 1369 aa16.4■□□□□ 0.22
CCHCR1-213ENST00000480060 TIAM1Q13009 1591 aa16.39■□□□□ 0.21
CCHCR1-213ENST00000480060 HSPA2P54652 639 aa16.39■□□□□ 0.21
CCHCR1-213ENST00000480060 ARID4BQ4LE39 1312 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms