RNA–Protein interactions for RNA: ENST00000480060.5

CCHCR1-213, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-213ENST00000480060 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
CCHCR1-213ENST00000480060 ABCC9O60706 1549 aa22.43■■□□□ 1.18
CCHCR1-213ENST00000480060 DNAJC5BQ9UF47 199 aa21.76■■□□□ 1.07
CCHCR1-213ENST00000480060 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
CCHCR1-213ENST00000480060 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
CCHCR1-213ENST00000480060 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
CCHCR1-213ENST00000480060 NACADO15069 1562 aa20.8■□□□□ 0.92
CCHCR1-213ENST00000480060 DCAF8L2P0C7V8 631 aa20.64■□□□□ 0.89
CCHCR1-213ENST00000480060 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
CCHCR1-213ENST00000480060 BICRAQ9NZM4 1560 aa20.48■□□□□ 0.87
CCHCR1-213ENST00000480060 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
CCHCR1-213ENST00000480060 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
CCHCR1-213ENST00000480060 MYO15BQ96JP2 1530 aa20.39■□□□□ 0.85
CCHCR1-213ENST00000480060 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
CCHCR1-213ENST00000480060 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
CCHCR1-213ENST00000480060 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
CCHCR1-213ENST00000480060 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
CCHCR1-213ENST00000480060 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
CCHCR1-213ENST00000480060 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
CCHCR1-213ENST00000480060 CUX2O14529 1486 aa19.62■□□□□ 0.73
CCHCR1-213ENST00000480060 ERCC6Q03468 1493 aa19.4■□□□□ 0.7
CCHCR1-213ENST00000480060 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
CCHCR1-213ENST00000480060 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
CCHCR1-213ENST00000480060 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
CCHCR1-213ENST00000480060 NESP48681 1621 aa19.1■□□□□ 0.65
CCHCR1-213ENST00000480060 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
CCHCR1-213ENST00000480060 HMGXB3Q12766 1538 aa19■□□□□ 0.63
CCHCR1-213ENST00000480060 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
CCHCR1-213ENST00000480060 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
CCHCR1-213ENST00000480060 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
CCHCR1-213ENST00000480060 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
CCHCR1-213ENST00000480060 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
CCHCR1-213ENST00000480060 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
CCHCR1-213ENST00000480060 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
CCHCR1-213ENST00000480060 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
CCHCR1-213ENST00000480060 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-213ENST00000480060 OSCARQ8IYS5 282 aa18.74■□□□□ 0.59
CCHCR1-213ENST00000480060 WIZO95785 1651 aa18.73■□□□□ 0.59
CCHCR1-213ENST00000480060 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
CCHCR1-213ENST00000480060 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
CCHCR1-213ENST00000480060 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
CCHCR1-213ENST00000480060 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
CCHCR1-213ENST00000480060 WDR62O43379 1518 aa18.61■□□□□ 0.57
CCHCR1-213ENST00000480060 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
CCHCR1-213ENST00000480060 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
CCHCR1-213ENST00000480060 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
CCHCR1-213ENST00000480060 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
CCHCR1-213ENST00000480060 RIMBP3CA6NJZ7 1639 aa18.35■□□□□ 0.53
CCHCR1-213ENST00000480060 RIMBP3BA6NNM3 1639 aa18.35■□□□□ 0.53
CCHCR1-213ENST00000480060 RIMBP3Q9UFD9 1639 aa18.35■□□□□ 0.53
CCHCR1-213ENST00000480060 CFTRP13569 1480 aa18.32■□□□□ 0.52
CCHCR1-213ENST00000480060 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
CCHCR1-213ENST00000480060 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
CCHCR1-213ENST00000480060 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-213ENST00000480060 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-213ENST00000480060 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-213ENST00000480060 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-213ENST00000480060 IFT140Q96RY7 1462 aa18.14■□□□□ 0.5
CCHCR1-213ENST00000480060 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
CCHCR1-213ENST00000480060 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
CCHCR1-213ENST00000480060 FBLN2P98095 1184 aa17.97■□□□□ 0.47
CCHCR1-213ENST00000480060 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
CCHCR1-213ENST00000480060 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.472e-10■■■■■ 47.9
CCHCR1-213ENST00000480060 ABCC8Q09428 1581 aa17.94■□□□□ 0.46
CCHCR1-213ENST00000480060 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-213ENST00000480060 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.45
CCHCR1-213ENST00000480060 CHD1O14646 1710 aa17.84■□□□□ 0.45
CCHCR1-213ENST00000480060 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
CCHCR1-213ENST00000480060 TARBP1Q13395 1621 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-213ENST00000480060 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
CCHCR1-213ENST00000480060 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-213ENST00000480060 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
CCHCR1-213ENST00000480060 POLA1P09884 1462 aaPredicted RBP17.76■□□□□ 0.43
CCHCR1-213ENST00000480060 CUX1P39880 1505 aa17.76■□□□□ 0.43
CCHCR1-213ENST00000480060 CLASP1Q7Z460 1538 aa17.75■□□□□ 0.43
CCHCR1-213ENST00000480060 SOGA1O94964 1423 aa17.72■□□□□ 0.43
CCHCR1-213ENST00000480060 SYNJ1O43426 1573 aa17.72■□□□□ 0.43
CCHCR1-213ENST00000480060 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
CCHCR1-213ENST00000480060 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
CCHCR1-213ENST00000480060 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
CCHCR1-213ENST00000480060 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
CCHCR1-213ENST00000480060 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-213ENST00000480060 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
CCHCR1-213ENST00000480060 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
CCHCR1-213ENST00000480060 SYNJ2O15056 1496 aa17.61■□□□□ 0.41
CCHCR1-213ENST00000480060 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
CCHCR1-213ENST00000480060 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
CCHCR1-213ENST00000480060 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-213ENST00000480060 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-213ENST00000480060 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
CCHCR1-213ENST00000480060 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
CCHCR1-213ENST00000480060 EEA1Q15075 1411 aa17.47■□□□□ 0.39
CCHCR1-213ENST00000480060 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
CCHCR1-213ENST00000480060 RUSC2Q8N2Y8 1516 aa17.45■□□□□ 0.38
CCHCR1-213ENST00000480060 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
CCHCR1-213ENST00000480060 ERCC6L2Q5T890 1561 aa17.42■□□□□ 0.38
CCHCR1-213ENST00000480060 IGF1RP08069 1367 aa17.39■□□□□ 0.37
CCHCR1-213ENST00000480060 NUP160Q12769 1436 aa17.37■□□□□ 0.37
CCHCR1-213ENST00000480060 FAM69CQ0P6D2 419 aa17.36■□□□□ 0.37
CCHCR1-213ENST00000480060 GRIN2AQ12879 1464 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms