RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 IQGAP2Q13576 1575 aa20.51■□□□□ 0.87
TRAPPC12-218ENST00000479897 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
TRAPPC12-218ENST00000479897 TNIKQ9UKE5 1360 aa20.46■□□□□ 0.87
TRAPPC12-218ENST00000479897 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
TRAPPC12-218ENST00000479897 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
TRAPPC12-218ENST00000479897 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
TRAPPC12-218ENST00000479897 SAMD9Q5K651 1589 aa20.37■□□□□ 0.85
TRAPPC12-218ENST00000479897 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
TRAPPC12-218ENST00000479897 EFCAB5A4FU69 1503 aa20.36■□□□□ 0.85
TRAPPC12-218ENST00000479897 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
TRAPPC12-218ENST00000479897 KIAA0556O60303 1618 aa20.32■□□□□ 0.84
TRAPPC12-218ENST00000479897 DISP1Q96F81 1524 aa20.3■□□□□ 0.84
TRAPPC12-218ENST00000479897 CEP162Q5TB80 1403 aa20.29■□□□□ 0.84
TRAPPC12-218ENST00000479897 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
TRAPPC12-218ENST00000479897 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
TRAPPC12-218ENST00000479897 CLIP1P30622 1438 aa20.26■□□□□ 0.83
TRAPPC12-218ENST00000479897 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC12-218ENST00000479897 CARMIL2Q6F5E8 1435 aa20.25■□□□□ 0.83
TRAPPC12-218ENST00000479897 ERCC6L2Q5T890 1561 aa20.23■□□□□ 0.83
TRAPPC12-218ENST00000479897 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
TRAPPC12-218ENST00000479897 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
TRAPPC12-218ENST00000479897 RIMBP3CA6NJZ7 1639 aa20.16■□□□□ 0.82
TRAPPC12-218ENST00000479897 RIMBP3BA6NNM3 1639 aa20.16■□□□□ 0.82
TRAPPC12-218ENST00000479897 RIMBP3Q9UFD9 1639 aa20.16■□□□□ 0.82
TRAPPC12-218ENST00000479897 FHOD3Q2V2M9 1422 aa20.14■□□□□ 0.81
TRAPPC12-218ENST00000479897 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC12-218ENST00000479897 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
TRAPPC12-218ENST00000479897 ABCA8O94911 1581 aa20.06■□□□□ 0.8
TRAPPC12-218ENST00000479897 PTPRGP23470 1445 aa20.06■□□□□ 0.8
TRAPPC12-218ENST00000479897 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
TRAPPC12-218ENST00000479897 RAPGEF6Q8TEU7 1601 aa20.04■□□□□ 0.8
TRAPPC12-218ENST00000479897 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
TRAPPC12-218ENST00000479897 PCF11O94913 1555 aaKnown RBP20.03■□□□□ 0.8
TRAPPC12-218ENST00000479897 DNAJC5Q9H3Z4 198 aa20.02■□□□□ 0.8
TRAPPC12-218ENST00000479897 UHRF1BP1LA0JNW5 1464 aa20.01■□□□□ 0.79
TRAPPC12-218ENST00000479897 FYCO1Q9BQS8 1478 aa20■□□□□ 0.79
TRAPPC12-218ENST00000479897 HECW1Q76N89 1606 aa20■□□□□ 0.79
TRAPPC12-218ENST00000479897 ABCC2Q92887 1545 aa20■□□□□ 0.79
TRAPPC12-218ENST00000479897 CASKIN1Q8WXD9 1431 aa20■□□□□ 0.79
TRAPPC12-218ENST00000479897 PLB1Q6P1J6 1458 aa19.99■□□□□ 0.79
TRAPPC12-218ENST00000479897 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
TRAPPC12-218ENST00000479897 ADCY10Q96PN6 1610 aa19.97■□□□□ 0.79
TRAPPC12-218ENST00000479897 NUP153P49790 1475 aaKnown RBP19.94■□□□□ 0.78
TRAPPC12-218ENST00000479897 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
TRAPPC12-218ENST00000479897 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
TRAPPC12-218ENST00000479897 KDM5BQ9UGL1 1544 aa19.9■□□□□ 0.78
TRAPPC12-218ENST00000479897 CFAP43Q8NDM7 1665 aa19.9■□□□□ 0.78
TRAPPC12-218ENST00000479897 EPRSP07814 1512 aaKnown RBP19.88■□□□□ 0.77
TRAPPC12-218ENST00000479897 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
TRAPPC12-218ENST00000479897 TTBK1Q5TCY1 1321 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC12-218ENST00000479897 ZCCHC11Q5TAX3 1644 aaKnown RBP19.87■□□□□ 0.77
TRAPPC12-218ENST00000479897 TIAM1Q13009 1591 aa19.83■□□□□ 0.77
TRAPPC12-218ENST00000479897 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.77
TRAPPC12-218ENST00000479897 ATP10BO94823 1461 aa19.82■□□□□ 0.76
TRAPPC12-218ENST00000479897 CDK13Q14004 1512 aaKnown RBP19.81■□□□□ 0.76
TRAPPC12-218ENST00000479897 MAPKBP1O60336 1514 aa19.78■□□□□ 0.76
TRAPPC12-218ENST00000479897 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
TRAPPC12-218ENST00000479897 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
TRAPPC12-218ENST00000479897 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC12-218ENST00000479897 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
TRAPPC12-218ENST00000479897 WDR7Q9Y4E6 1490 aa19.7■□□□□ 0.74
TRAPPC12-218ENST00000479897 TROQ12816 1431 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC12-218ENST00000479897 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
TRAPPC12-218ENST00000479897 NPM1P06748 294 aaKnown RBP eCLIP19.68■□□□□ 0.74
TRAPPC12-218ENST00000479897 APLP2Q06481 763 aa19.67■□□□□ 0.74
TRAPPC12-218ENST00000479897 CDK11AQ9UQ88 783 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC12-218ENST00000479897 ARID3CA6NKF2 412 aa19.66■□□□□ 0.74
TRAPPC12-218ENST00000479897 KIF14Q15058 1648 aa19.65■□□□□ 0.74
TRAPPC12-218ENST00000479897 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
TRAPPC12-218ENST00000479897 MTUS2Q5JR59 1369 aa19.64■□□□□ 0.73
TRAPPC12-218ENST00000479897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC12-218ENST00000479897 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
TRAPPC12-218ENST00000479897 PLEKHD1A6NEE1 506 aa19.61■□□□□ 0.73
TRAPPC12-218ENST00000479897 ABCA9Q8IUA7 1624 aa19.6■□□□□ 0.73
TRAPPC12-218ENST00000479897 GLI2P10070 1586 aa19.6■□□□□ 0.73
TRAPPC12-218ENST00000479897 DIP2BQ9P265 1576 aa19.6■□□□□ 0.73
TRAPPC12-218ENST00000479897 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC12-218ENST00000479897 ABCC10Q5T3U5 1492 aa19.57■□□□□ 0.72
TRAPPC12-218ENST00000479897 TTC37Q6PGP7 1564 aa19.57■□□□□ 0.72
TRAPPC12-218ENST00000479897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRAPPC12-218ENST00000479897 NCOA2Q15596 1464 aa19.56■□□□□ 0.72
TRAPPC12-218ENST00000479897 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
TRAPPC12-218ENST00000479897 ITSN2Q9NZM3 1697 aa19.54■□□□□ 0.72
TRAPPC12-218ENST00000479897 MAP3K4Q9Y6R4 1608 aa19.53■□□□□ 0.72
TRAPPC12-218ENST00000479897 MYO5CQ9NQX4 1742 aa19.53■□□□□ 0.72
TRAPPC12-218ENST00000479897 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
TRAPPC12-218ENST00000479897 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
TRAPPC12-218ENST00000479897 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
TRAPPC12-218ENST00000479897 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
TRAPPC12-218ENST00000479897 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
TRAPPC12-218ENST00000479897 MYOM3Q5VTT5 1437 aa19.45■□□□□ 0.7
TRAPPC12-218ENST00000479897 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
TRAPPC12-218ENST00000479897 KCNH8Q96L42 1107 aa19.44■□□□□ 0.7
TRAPPC12-218ENST00000479897 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
TRAPPC12-218ENST00000479897 PPRC1Q5VV67 1664 aaKnown RBP19.43■□□□□ 0.7
TRAPPC12-218ENST00000479897 PLCH2O75038 1416 aa19.42■□□□□ 0.7
TRAPPC12-218ENST00000479897 CFAP74Q9C0B2 1584 aa19.42■□□□□ 0.7
TRAPPC12-218ENST00000479897 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
TRAPPC12-218ENST00000479897 CD109Q6YHK3 1445 aa19.41■□□□□ 0.7
TRAPPC12-218ENST00000479897 FGD6Q6ZV73 1430 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms