RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
TRAPPC12-218ENST00000479897 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
TRAPPC12-218ENST00000479897 ABCC9O60706 1549 aa25.19■■□□□ 1.62
TRAPPC12-218ENST00000479897 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
TRAPPC12-218ENST00000479897 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
TRAPPC12-218ENST00000479897 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
TRAPPC12-218ENST00000479897 NACADO15069 1562 aa24.67■■□□□ 1.54
TRAPPC12-218ENST00000479897 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
TRAPPC12-218ENST00000479897 DCAF8L2P0C7V8 631 aa24.44■■□□□ 1.5
TRAPPC12-218ENST00000479897 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
TRAPPC12-218ENST00000479897 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
TRAPPC12-218ENST00000479897 BICRAQ9NZM4 1560 aa23.81■■□□□ 1.4
TRAPPC12-218ENST00000479897 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
TRAPPC12-218ENST00000479897 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRAPPC12-218ENST00000479897 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
TRAPPC12-218ENST00000479897 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
TRAPPC12-218ENST00000479897 BAZ1AQ9NRL2 1556 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC12-218ENST00000479897 SMARCA4P51532 1647 aa23.08■■□□□ 1.29
TRAPPC12-218ENST00000479897 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
TRAPPC12-218ENST00000479897 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
TRAPPC12-218ENST00000479897 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
TRAPPC12-218ENST00000479897 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC12-218ENST00000479897 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
TRAPPC12-218ENST00000479897 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
TRAPPC12-218ENST00000479897 WIZO95785 1651 aa22.76■■□□□ 1.23
TRAPPC12-218ENST00000479897 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
TRAPPC12-218ENST00000479897 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
TRAPPC12-218ENST00000479897 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
TRAPPC12-218ENST00000479897 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
TRAPPC12-218ENST00000479897 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
TRAPPC12-218ENST00000479897 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
TRAPPC12-218ENST00000479897 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
TRAPPC12-218ENST00000479897 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.13
TRAPPC12-218ENST00000479897 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
TRAPPC12-218ENST00000479897 CFTRP13569 1480 aa22.05■■□□□ 1.12
TRAPPC12-218ENST00000479897 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
TRAPPC12-218ENST00000479897 NESP48681 1621 aa21.95■■□□□ 1.1
TRAPPC12-218ENST00000479897 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
TRAPPC12-218ENST00000479897 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
TRAPPC12-218ENST00000479897 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
TRAPPC12-218ENST00000479897 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
TRAPPC12-218ENST00000479897 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
TRAPPC12-218ENST00000479897 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
TRAPPC12-218ENST00000479897 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
TRAPPC12-218ENST00000479897 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
TRAPPC12-218ENST00000479897 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
TRAPPC12-218ENST00000479897 WDR62O43379 1518 aa21.58■■□□□ 1.04
TRAPPC12-218ENST00000479897 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
TRAPPC12-218ENST00000479897 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
TRAPPC12-218ENST00000479897 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
TRAPPC12-218ENST00000479897 CUX1P39880 1505 aa21.54■■□□□ 1.04
TRAPPC12-218ENST00000479897 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
TRAPPC12-218ENST00000479897 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
TRAPPC12-218ENST00000479897 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
TRAPPC12-218ENST00000479897 CUX2O14529 1486 aa21.38■■□□□ 1.01
TRAPPC12-218ENST00000479897 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
TRAPPC12-218ENST00000479897 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC12-218ENST00000479897 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
TRAPPC12-218ENST00000479897 WDR97A6NE52 1622 aa21.29■■□□□ 1
TRAPPC12-218ENST00000479897 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
TRAPPC12-218ENST00000479897 IFT140Q96RY7 1462 aa21.27■■□□□ 1
TRAPPC12-218ENST00000479897 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
TRAPPC12-218ENST00000479897 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
TRAPPC12-218ENST00000479897 SOGA1O94964 1423 aa21.22■□□□□ 0.99
TRAPPC12-218ENST00000479897 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
TRAPPC12-218ENST00000479897 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
TRAPPC12-218ENST00000479897 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
TRAPPC12-218ENST00000479897 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC12-218ENST00000479897 KIF27Q86VH2 1401 aa21.05■□□□□ 0.96
TRAPPC12-218ENST00000479897 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
TRAPPC12-218ENST00000479897 GAPVD1Q14C86 1478 aa21.03■□□□□ 0.96
TRAPPC12-218ENST00000479897 EEA1Q15075 1411 aa21.03■□□□□ 0.96
TRAPPC12-218ENST00000479897 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
TRAPPC12-218ENST00000479897 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
TRAPPC12-218ENST00000479897 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.95
TRAPPC12-218ENST00000479897 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
TRAPPC12-218ENST00000479897 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
TRAPPC12-218ENST00000479897 CUL7Q14999 1698 aa20.93■□□□□ 0.94
TRAPPC12-218ENST00000479897 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC12-218ENST00000479897 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
TRAPPC12-218ENST00000479897 IGF1RP08069 1367 aa20.87■□□□□ 0.93
TRAPPC12-218ENST00000479897 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
TRAPPC12-218ENST00000479897 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
TRAPPC12-218ENST00000479897 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
TRAPPC12-218ENST00000479897 KIF21BO75037 1637 aa20.81■□□□□ 0.92
TRAPPC12-218ENST00000479897 SYNJ2O15056 1496 aa20.8■□□□□ 0.92
TRAPPC12-218ENST00000479897 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
TRAPPC12-218ENST00000479897 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
TRAPPC12-218ENST00000479897 CHD1O14646 1710 aa20.75■□□□□ 0.91
TRAPPC12-218ENST00000479897 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
TRAPPC12-218ENST00000479897 FAM9AQ8IZU1 332 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-218ENST00000479897 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
TRAPPC12-218ENST00000479897 GOLGA3Q08378 1498 aa20.66■□□□□ 0.9
TRAPPC12-218ENST00000479897 NUP160Q12769 1436 aa20.62■□□□□ 0.89
TRAPPC12-218ENST00000479897 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
TRAPPC12-218ENST00000479897 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
TRAPPC12-218ENST00000479897 CHMP7Q8WUX9 453 aaPredicted RBP20.61■□□□□ 0.89
TRAPPC12-218ENST00000479897 CLASP1Q7Z460 1538 aa20.54■□□□□ 0.88
TRAPPC12-218ENST00000479897 FBLN2P98095 1184 aa20.54■□□□□ 0.88
TRAPPC12-218ENST00000479897 KIAA0586Q9BVV6 1533 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms