RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	CUL7	Q14999	1698 aa		14.37	□□□□□ -0.11
SH3YL1-222	ENST00000479739	MYT1	Q01538	1121 aa		14.37	□□□□□ -0.11
SH3YL1-222	ENST00000479739	TRIM41	Q8WV44	630 aa		14.33	□□□□□ -0.12
SH3YL1-222	ENST00000479739	RUSC2	Q8N2Y8	1516 aa		14.32	□□□□□ -0.12
SH3YL1-222	ENST00000479739	ARAP1	Q96P48	1450 aa		14.31	□□□□□ -0.12
SH3YL1-222	ENST00000479739	SHROOM2	Q13796	1616 aa		14.31	□□□□□ -0.12
SH3YL1-222	ENST00000479739	CARMIL1	Q5VZK9	1371 aa		14.29	□□□□□ -0.12
SH3YL1-222	ENST00000479739	ERCC6L2	Q5T890	1561 aa		14.25	□□□□□ -0.13
SH3YL1-222	ENST00000479739	CYB5RL	Q6IPT4	315 aa		14.23	□□□□□ -0.13
SH3YL1-222	ENST00000479739	KIAA0586	Q9BVV6	1533 aa		14.23	□□□□□ -0.13
SH3YL1-222	ENST00000479739	RAPGEF2	Q9Y4G8	1499 aa		14.21	□□□□□ -0.13
SH3YL1-222	ENST00000479739	JPH4	Q96JJ6	628 aa		14.19	□□□□□ -0.14
SH3YL1-222	ENST00000479739	PRX	Q9BXM0	1461 aa		14.19	□□□□□ -0.14
SH3YL1-222	ENST00000479739	PRG4	Q92954	1404 aa	Predicted RBP	14.18	□□□□□ -0.14
SH3YL1-222	ENST00000479739	IQGAP2	Q13576	1575 aa		14.15	□□□□□ -0.14
SH3YL1-222	ENST00000479739	EEA1	Q15075	1411 aa		14.15	□□□□□ -0.14
SH3YL1-222	ENST00000479739	CTTNBP2	Q8WZ74	1663 aa		14.11	□□□□□ -0.15
SH3YL1-222	ENST00000479739	CSRNP3	Q8WYN3	585 aa		14.1	□□□□□ -0.15
SH3YL1-222	ENST00000479739	UGGT2	Q9NYU1	1516 aa		14.09	□□□□□ -0.15
SH3YL1-222	ENST00000479739	DISP1	Q96F81	1524 aa		14.07	□□□□□ -0.16
SH3YL1-222	ENST00000479739	CARMIL2	Q6F5E8	1435 aa		14.04	□□□□□ -0.16
SH3YL1-222	ENST00000479739	KIF21B	O75037	1637 aa		14.03	□□□□□ -0.16
SH3YL1-222	ENST00000479739	KIAA0556	O60303	1618 aa		14.02	□□□□□ -0.16
SH3YL1-222	ENST00000479739	TNIK	Q9UKE5	1360 aa		14.02	□□□□□ -0.17
SH3YL1-222	ENST00000479739	ADCY10	Q96PN6	1610 aa		14.01	□□□□□ -0.17
SH3YL1-222	ENST00000479739	FAM9A	Q8IZU1	332 aa	Predicted RBP	14	□□□□□ -0.17
SH3YL1-222	ENST00000479739	PTPRG	P23470	1445 aa		14	□□□□□ -0.17
SH3YL1-222	ENST00000479739	GOLGA3	Q08378	1498 aa		13.97	□□□□□ -0.17
SH3YL1-222	ENST00000479739	SAMD9	Q5K651	1589 aa		13.94	□□□□□ -0.18
SH3YL1-222	ENST00000479739	UHRF1BP1L	A0JNW5	1464 aa		13.94	□□□□□ -0.18
SH3YL1-222	ENST00000479739	MAPKBP1	O60336	1514 aa		13.93	□□□□□ -0.18
SH3YL1-222	ENST00000479739	UACA	Q9BZF9	1416 aa		13.92	□□□□□ -0.18
SH3YL1-222	ENST00000479739	TRH	P20396	242 aa	Predicted RBP	13.92	□□□□□ -0.18
SH3YL1-222	ENST00000479739	ABCC2	Q92887	1545 aa		13.92	□□□□□ -0.18
SH3YL1-222	ENST00000479739	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.9	□□□□□ -0.19
SH3YL1-222	ENST00000479739	KIF13A	Q9H1H9	1805 aa		13.89	□□□□□ -0.19
SH3YL1-222	ENST00000479739	ABCA8	O94911	1581 aa		13.88	□□□□□ -0.19
SH3YL1-222	ENST00000479739	KDM5B	Q9UGL1	1544 aa		13.87	□□□□□ -0.19
SH3YL1-222	ENST00000479739	NPM1	P06748	294 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
SH3YL1-222	ENST00000479739	PLB1	Q6P1J6	1458 aa		13.87	□□□□□ -0.19
SH3YL1-222	ENST00000479739	ABCC10	Q5T3U5	1492 aa		13.86	□□□□□ -0.19
SH3YL1-222	ENST00000479739	DIP2B	Q9P265	1576 aa		13.85	□□□□□ -0.19
SH3YL1-222	ENST00000479739	SCAF1	Q9H7N4	1312 aa	Known RBP	13.85	□□□□□ -0.19
SH3YL1-222	ENST00000479739	EFCAB5	A4FU69	1503 aa		13.85	□□□□□ -0.19
SH3YL1-222	ENST00000479739	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.84	□□□□□ -0.19
SH3YL1-222	ENST00000479739	P3H3	Q8IVL6	736 aa		13.82	□□□□□ -0.2
SH3YL1-222	ENST00000479739	UBTF	P17480	764 aa	Known RBP	13.81	□□□□□ -0.2
SH3YL1-222	ENST00000479739	FHOD3	Q2V2M9	1422 aa		13.81	□□□□□ -0.2
SH3YL1-222	ENST00000479739	ASXL2	Q76L83	1435 aa		13.81	□□□□□ -0.2
SH3YL1-222	ENST00000479739	EHMT2	Q96KQ7	1210 aa		13.79	□□□□□ -0.2
SH3YL1-222	ENST00000479739	RAPGEF6	Q8TEU7	1601 aa		13.79	□□□□□ -0.2
SH3YL1-222	ENST00000479739	RANGAP1	P46060	587 aa	Predicted RBP	13.78	□□□□□ -0.2
SH3YL1-222	ENST00000479739	ARHGAP35	Q9NRY4	1499 aa		13.78	□□□□□ -0.2
SH3YL1-222	ENST00000479739	FAM69C	Q0P6D2	419 aa		13.77	□□□□□ -0.21
SH3YL1-222	ENST00000479739	CCER1	Q8TC90	406 aa	Predicted RBP	13.77	□□□□□ -0.21
SH3YL1-222	ENST00000479739	GLI2	P10070	1586 aa		13.77	□□□□□ -0.21
SH3YL1-222	ENST00000479739	ATP10B	O94823	1461 aa		13.75	□□□□□ -0.21
SH3YL1-222	ENST00000479739	WDR7	Q9Y4E6	1490 aa		13.75	□□□□□ -0.21
SH3YL1-222	ENST00000479739	EPRS	P07814	1512 aa	Known RBP	13.75	□□□□□ -0.21
SH3YL1-222	ENST00000479739	NUP153	P49790	1475 aa	Known RBP	13.74	□□□□□ -0.21
SH3YL1-222	ENST00000479739	ACIN1	Q9UKV3	1341 aa	Known RBP	13.73	□□□□□ -0.21
SH3YL1-222	ENST00000479739	PPRC1	Q5VV67	1664 aa	Known RBP	13.71	□□□□□ -0.21
SH3YL1-222	ENST00000479739	MAP3K4	Q9Y6R4	1608 aa		13.71	□□□□□ -0.21
SH3YL1-222	ENST00000479739	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.7	□□□□□ -0.22
SH3YL1-222	ENST00000479739	CENPB	P07199	599 aa	Predicted RBP	13.7	□□□□□ -0.22
SH3YL1-222	ENST00000479739	TSPOAP1	O95153	1857 aa		13.7	□□□□□ -0.22
SH3YL1-222	ENST00000479739	FMN1	Q68DA7	1419 aa		13.69	□□□□□ -0.22
SH3YL1-222	ENST00000479739	CEP162	Q5TB80	1403 aa		13.69	□□□□□ -0.22
SH3YL1-222	ENST00000479739	ARID3C	A6NKF2	412 aa		13.66	□□□□□ -0.22
SH3YL1-222	ENST00000479739	CFAP43	Q8NDM7	1665 aa		13.66	□□□□□ -0.22
SH3YL1-222	ENST00000479739	DIEXF	Q68CQ4	756 aa	Known RBP	13.66	□□□□□ -0.22
SH3YL1-222	ENST00000479739	CLIP1	P30622	1438 aa		13.65	□□□□□ -0.22
SH3YL1-222	ENST00000479739	HECW1	Q76N89	1606 aa		13.65	□□□□□ -0.22
SH3YL1-222	ENST00000479739	LRRIQ1	Q96JM4	1722 aa		13.63	□□□□□ -0.23
SH3YL1-222	ENST00000479739	CDK13	Q14004	1512 aa	Known RBP	13.63	□□□□□ -0.23
SH3YL1-222	ENST00000479739	ABCA9	Q8IUA7	1624 aa		13.62	□□□□□ -0.23
SH3YL1-222	ENST00000479739	MAGI3	Q5TCQ9	1506 aa		13.61	□□□□□ -0.23
SH3YL1-222	ENST00000479739	KCNH8	Q96L42	1107 aa		13.61	□□□□□ -0.23
SH3YL1-222	ENST00000479739	PCF11	O94913	1555 aa	Known RBP	13.61	□□□□□ -0.23
SH3YL1-222	ENST00000479739	KDM6B	O15054	1643 aa		13.61	□□□□□ -0.23
SH3YL1-222	ENST00000479739	CD109	Q6YHK3	1445 aa		13.6	□□□□□ -0.23
SH3YL1-222	ENST00000479739	TEX14	Q8IWB6	1497 aa		13.6	□□□□□ -0.23
SH3YL1-222	ENST00000479739	NEUROD1	Q13562	356 aa		13.6	□□□□□ -0.23
SH3YL1-222	ENST00000479739	CASKIN1	Q8WXD9	1431 aa		13.6	□□□□□ -0.23
SH3YL1-222	ENST00000479739	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.59	□□□□□ -0.23
SH3YL1-222	ENST00000479739	FYCO1	Q9BQS8	1478 aa		13.57	□□□□□ -0.24
SH3YL1-222	ENST00000479739	PLEKHD1	A6NEE1	506 aa		13.56	□□□□□ -0.24
SH3YL1-222	ENST00000479739	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.56	□□□□□ -0.24
SH3YL1-222	ENST00000479739	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SH3YL1-222	ENST00000479739	CCDC18	Q5T9S5	1454 aa		13.55	□□□□□ -0.24
SH3YL1-222	ENST00000479739	TTC37	Q6PGP7	1564 aa		13.54	□□□□□ -0.24
SH3YL1-222	ENST00000479739	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.53	□□□□□ -0.24
SH3YL1-222	ENST00000479739	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.53	□□□□□ -0.24
SH3YL1-222	ENST00000479739	TRO	Q12816	1431 aa	Predicted RBP	13.52	□□□□□ -0.25
SH3YL1-222	ENST00000479739	GTF3C3	Q9Y5Q9	886 aa		13.51	□□□□□ -0.25
SH3YL1-222	ENST00000479739	KIF14	Q15058	1648 aa		13.5	□□□□□ -0.25
SH3YL1-222	ENST00000479739	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.5	□□□□□ -0.25
SH3YL1-222	ENST00000479739	NEO1	Q92859	1461 aa		13.5	□□□□□ -0.25
SH3YL1-222	ENST00000479739	ARAP3	Q8WWN8	1544 aa		13.5	□□□□□ -0.25
SH3YL1-222	ENST00000479739	PHLDB1	Q86UU1	1377 aa		13.49	□□□□□ -0.25

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