RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 JPH4Q96JJ6 628 aa23.07■■□□□ 1.28
PCIF1-202ENST00000479348 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
PCIF1-202ENST00000479348 KIF21BO75037 1637 aa23.04■■□□□ 1.28
PCIF1-202ENST00000479348 RIMBP3CA6NJZ7 1639 aa23.03■■□□□ 1.28
PCIF1-202ENST00000479348 RIMBP3BA6NNM3 1639 aa23.03■■□□□ 1.28
PCIF1-202ENST00000479348 RIMBP3Q9UFD9 1639 aa23.03■■□□□ 1.28
PCIF1-202ENST00000479348 IQGAP2Q13576 1575 aa23■■□□□ 1.27
PCIF1-202ENST00000479348 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
PCIF1-202ENST00000479348 CTTNBP2Q8WZ74 1663 aa22.96■■□□□ 1.27
PCIF1-202ENST00000479348 GOLGA3Q08378 1498 aa22.93■■□□□ 1.26
PCIF1-202ENST00000479348 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
PCIF1-202ENST00000479348 CARMIL2Q6F5E8 1435 aa22.9■■□□□ 1.26
PCIF1-202ENST00000479348 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
PCIF1-202ENST00000479348 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.25
PCIF1-202ENST00000479348 UBTFP17480 764 aaKnown RBP22.86■■□□□ 1.25
PCIF1-202ENST00000479348 CYB5RLQ6IPT4 315 aa22.86■■□□□ 1.25
PCIF1-202ENST00000479348 DISP1Q96F81 1524 aa22.82■■□□□ 1.24
PCIF1-202ENST00000479348 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
PCIF1-202ENST00000479348 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
PCIF1-202ENST00000479348 KIAA0556O60303 1618 aa22.76■■□□□ 1.23
PCIF1-202ENST00000479348 PTPRGP23470 1445 aa22.76■■□□□ 1.23
PCIF1-202ENST00000479348 SAMD9Q5K651 1589 aa22.69■■□□□ 1.22
PCIF1-202ENST00000479348 EFCAB5A4FU69 1503 aa22.67■■□□□ 1.22
PCIF1-202ENST00000479348 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
PCIF1-202ENST00000479348 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
PCIF1-202ENST00000479348 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
PCIF1-202ENST00000479348 UACAQ9BZF9 1416 aa22.6■■□□□ 1.21
PCIF1-202ENST00000479348 UHRF1BP1LA0JNW5 1464 aa22.59■■□□□ 1.21
PCIF1-202ENST00000479348 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
PCIF1-202ENST00000479348 ARHGAP35Q9NRY4 1499 aa22.57■■□□□ 1.2
PCIF1-202ENST00000479348 NPM1P06748 294 aaKnown RBP eCLIP22.56■■□□□ 1.2
PCIF1-202ENST00000479348 ADCY10Q96PN6 1610 aa22.55■■□□□ 1.2
PCIF1-202ENST00000479348 FHOD3Q2V2M9 1422 aa22.55■■□□□ 1.2
PCIF1-202ENST00000479348 ABCC2Q92887 1545 aa22.53■■□□□ 1.2
PCIF1-202ENST00000479348 CLIP1P30622 1438 aa22.52■■□□□ 1.2
PCIF1-202ENST00000479348 PLB1Q6P1J6 1458 aa22.52■■□□□ 1.2
PCIF1-202ENST00000479348 ABCA8O94911 1581 aa22.51■■□□□ 1.19
PCIF1-202ENST00000479348 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
PCIF1-202ENST00000479348 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
PCIF1-202ENST00000479348 KDM5BQ9UGL1 1544 aa22.46■■□□□ 1.19
PCIF1-202ENST00000479348 RAPGEF6Q8TEU7 1601 aa22.43■■□□□ 1.18
PCIF1-202ENST00000479348 MAPKBP1O60336 1514 aa22.42■■□□□ 1.18
PCIF1-202ENST00000479348 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
PCIF1-202ENST00000479348 NUP153P49790 1475 aaKnown RBP22.36■■□□□ 1.17
PCIF1-202ENST00000479348 ATP10BO94823 1461 aa22.34■■□□□ 1.17
PCIF1-202ENST00000479348 ASXL2Q76L83 1435 aa22.33■■□□□ 1.17
PCIF1-202ENST00000479348 TRHP20396 242 aaPredicted RBP22.32■■□□□ 1.16
PCIF1-202ENST00000479348 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
PCIF1-202ENST00000479348 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
PCIF1-202ENST00000479348 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
PCIF1-202ENST00000479348 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
PCIF1-202ENST00000479348 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
PCIF1-202ENST00000479348 FYCO1Q9BQS8 1478 aa22.27■■□□□ 1.16
PCIF1-202ENST00000479348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
PCIF1-202ENST00000479348 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
PCIF1-202ENST00000479348 WDR7Q9Y4E6 1490 aa22.26■■□□□ 1.15
PCIF1-202ENST00000479348 PCF11O94913 1555 aaKnown RBP22.25■■□□□ 1.15
PCIF1-202ENST00000479348 EPRSP07814 1512 aaKnown RBP22.24■■□□□ 1.15
PCIF1-202ENST00000479348 FAM69CQ0P6D2 419 aa22.23■■□□□ 1.15
PCIF1-202ENST00000479348 PLEKHD1A6NEE1 506 aa22.22■■□□□ 1.15
PCIF1-202ENST00000479348 DIP2BQ9P265 1576 aa22.22■■□□□ 1.15
PCIF1-202ENST00000479348 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
PCIF1-202ENST00000479348 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
PCIF1-202ENST00000479348 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.15
PCIF1-202ENST00000479348 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.14
PCIF1-202ENST00000479348 GLI2P10070 1586 aa22.19■■□□□ 1.14
PCIF1-202ENST00000479348 KIF13AQ9H1H9 1805 aa22.17■■□□□ 1.14
PCIF1-202ENST00000479348 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
PCIF1-202ENST00000479348 LRRIQ1Q96JM4 1722 aa22.13■■□□□ 1.13
PCIF1-202ENST00000479348 TROQ12816 1431 aaPredicted RBP22.08■■□□□ 1.13
PCIF1-202ENST00000479348 MAP3K4Q9Y6R4 1608 aa22.06■■□□□ 1.12
PCIF1-202ENST00000479348 CFAP43Q8NDM7 1665 aa22.05■■□□□ 1.12
PCIF1-202ENST00000479348 ABCA9Q8IUA7 1624 aa22.05■■□□□ 1.12
PCIF1-202ENST00000479348 CD109Q6YHK3 1445 aa22.04■■□□□ 1.12
PCIF1-202ENST00000479348 MAP3K1Q13233 1512 aa22.02■■□□□ 1.12
PCIF1-202ENST00000479348 MTUS2Q5JR59 1369 aa22■■□□□ 1.11
PCIF1-202ENST00000479348 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
PCIF1-202ENST00000479348 KIF14Q15058 1648 aa21.99■■□□□ 1.11
PCIF1-202ENST00000479348 TEX14Q8IWB6 1497 aa21.99■■□□□ 1.11
PCIF1-202ENST00000479348 APLP2Q06481 763 aa21.99■■□□□ 1.11
PCIF1-202ENST00000479348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.99■■□□□ 1.11
PCIF1-202ENST00000479348 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
PCIF1-202ENST00000479348 TSPOAP1O95153 1857 aa21.97■■□□□ 1.11
PCIF1-202ENST00000479348 EHBP1L1Q8N3D4 1523 aa21.95■■□□□ 1.1
PCIF1-202ENST00000479348 PPRC1Q5VV67 1664 aaKnown RBP21.94■■□□□ 1.1
PCIF1-202ENST00000479348 TTC37Q6PGP7 1564 aa21.93■■□□□ 1.1
PCIF1-202ENST00000479348 PHLDB1Q86UU1 1377 aa21.91■■□□□ 1.1
PCIF1-202ENST00000479348 PLCH2O75038 1416 aa21.9■■□□□ 1.1
PCIF1-202ENST00000479348 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
PCIF1-202ENST00000479348 ARAP3Q8WWN8 1544 aa21.88■■□□□ 1.09
PCIF1-202ENST00000479348 NEO1Q92859 1461 aa21.88■■□□□ 1.09
PCIF1-202ENST00000479348 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
PCIF1-202ENST00000479348 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
PCIF1-202ENST00000479348 EFCAB2Q5VUJ9 269 aa21.84■■□□□ 1.09
PCIF1-202ENST00000479348 FANCAO15360 1455 aa21.84■■□□□ 1.09
PCIF1-202ENST00000479348 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.09
PCIF1-202ENST00000479348 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.08
PCIF1-202ENST00000479348 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.08
PCIF1-202ENST00000479348 KDM6BO15054 1643 aa21.8■■□□□ 1.08
PCIF1-202ENST00000479348 GPATCH8Q9UKJ3 1502 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms