RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-211ENST00000479092 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
PTPN7-211ENST00000479092 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
PTPN7-211ENST00000479092 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
PTPN7-211ENST00000479092 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
PTPN7-211ENST00000479092 IQGAP2Q13576 1575 aa19.64■□□□□ 0.73
PTPN7-211ENST00000479092 KIF21BO75037 1637 aa19.63■□□□□ 0.73
PTPN7-211ENST00000479092 CTTNBP2Q8WZ74 1663 aa19.59■□□□□ 0.73
PTPN7-211ENST00000479092 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
PTPN7-211ENST00000479092 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
PTPN7-211ENST00000479092 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
PTPN7-211ENST00000479092 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
PTPN7-211ENST00000479092 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
PTPN7-211ENST00000479092 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
PTPN7-211ENST00000479092 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
PTPN7-211ENST00000479092 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
PTPN7-211ENST00000479092 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
PTPN7-211ENST00000479092 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
PTPN7-211ENST00000479092 DISP1Q96F81 1524 aa19.45■□□□□ 0.7
PTPN7-211ENST00000479092 KIAA0556O60303 1618 aa19.44■□□□□ 0.7
PTPN7-211ENST00000479092 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
PTPN7-211ENST00000479092 PTPRGP23470 1445 aa19.38■□□□□ 0.69
PTPN7-211ENST00000479092 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
PTPN7-211ENST00000479092 SAMD9Q5K651 1589 aa19.36■□□□□ 0.69
PTPN7-211ENST00000479092 RANGAP1P46060 587 aaPredicted RBP19.35■□□□□ 0.69
PTPN7-211ENST00000479092 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
PTPN7-211ENST00000479092 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
PTPN7-211ENST00000479092 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
PTPN7-211ENST00000479092 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
PTPN7-211ENST00000479092 ADCY10Q96PN6 1610 aa19.26■□□□□ 0.67
PTPN7-211ENST00000479092 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
PTPN7-211ENST00000479092 UHRF1BP1LA0JNW5 1464 aa19.23■□□□□ 0.67
PTPN7-211ENST00000479092 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
PTPN7-211ENST00000479092 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
PTPN7-211ENST00000479092 NPM1P06748 294 aaKnown RBP eCLIP19.21■□□□□ 0.67
PTPN7-211ENST00000479092 ABCA8O94911 1581 aa19.19■□□□□ 0.66
PTPN7-211ENST00000479092 CLIP1P30622 1438 aa19.19■□□□□ 0.66
PTPN7-211ENST00000479092 FMN1Q68DA7 1419 aa19.16■□□□□ 0.66
PTPN7-211ENST00000479092 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
PTPN7-211ENST00000479092 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.66
PTPN7-211ENST00000479092 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
PTPN7-211ENST00000479092 MAPKBP1O60336 1514 aa19.14■□□□□ 0.65
PTPN7-211ENST00000479092 KDM5BQ9UGL1 1544 aa19.13■□□□□ 0.65
PTPN7-211ENST00000479092 ZCCHC11Q5TAX3 1644 aaKnown RBP19.1■□□□□ 0.65
PTPN7-211ENST00000479092 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
PTPN7-211ENST00000479092 NUP153P49790 1475 aaKnown RBP19.07■□□□□ 0.64
PTPN7-211ENST00000479092 HECW1Q76N89 1606 aa19.05■□□□□ 0.64
PTPN7-211ENST00000479092 ASXL2Q76L83 1435 aa19.05■□□□□ 0.64
PTPN7-211ENST00000479092 ARID3CA6NKF2 412 aa19.04■□□□□ 0.64
PTPN7-211ENST00000479092 PCF11O94913 1555 aaKnown RBP19.02■□□□□ 0.63
PTPN7-211ENST00000479092 ATP1B4Q9UN42 357 aaPredicted RBP19.01■□□□□ 0.63
PTPN7-211ENST00000479092 ATP10BO94823 1461 aa19.01■□□□□ 0.63
PTPN7-211ENST00000479092 ABCC10Q5T3U5 1492 aa19.01■□□□□ 0.63
PTPN7-211ENST00000479092 WDR7Q9Y4E6 1490 aa19.01■□□□□ 0.63
PTPN7-211ENST00000479092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
PTPN7-211ENST00000479092 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
PTPN7-211ENST00000479092 FYCO1Q9BQS8 1478 aa19■□□□□ 0.63
PTPN7-211ENST00000479092 DIP2BQ9P265 1576 aa19■□□□□ 0.63
PTPN7-211ENST00000479092 CASKIN1Q8WXD9 1431 aa19■□□□□ 0.63
PTPN7-211ENST00000479092 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
PTPN7-211ENST00000479092 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
PTPN7-211ENST00000479092 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
PTPN7-211ENST00000479092 CCDC18Q5T9S5 1454 aa18.95■□□□□ 0.62
PTPN7-211ENST00000479092 KIF13AQ9H1H9 1805 aa18.92■□□□□ 0.62
PTPN7-211ENST00000479092 GLI2P10070 1586 aa18.91■□□□□ 0.62
PTPN7-211ENST00000479092 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
PTPN7-211ENST00000479092 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
PTPN7-211ENST00000479092 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
PTPN7-211ENST00000479092 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
PTPN7-211ENST00000479092 LRRIQ1Q96JM4 1722 aa18.85■□□□□ 0.61
PTPN7-211ENST00000479092 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
PTPN7-211ENST00000479092 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
PTPN7-211ENST00000479092 CFAP43Q8NDM7 1665 aa18.81■□□□□ 0.6
PTPN7-211ENST00000479092 KIF14Q15058 1648 aa18.81■□□□□ 0.6
PTPN7-211ENST00000479092 ABCA9Q8IUA7 1624 aa18.8■□□□□ 0.6
PTPN7-211ENST00000479092 CD109Q6YHK3 1445 aa18.79■□□□□ 0.6
PTPN7-211ENST00000479092 TEX14Q8IWB6 1497 aa18.78■□□□□ 0.6
PTPN7-211ENST00000479092 TSPOAP1O95153 1857 aa18.76■□□□□ 0.59
PTPN7-211ENST00000479092 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
PTPN7-211ENST00000479092 TIAM1Q13009 1591 aa18.75■□□□□ 0.59
PTPN7-211ENST00000479092 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
PTPN7-211ENST00000479092 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
PTPN7-211ENST00000479092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.74■□□□□ 0.59
PTPN7-211ENST00000479092 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
PTPN7-211ENST00000479092 PPRC1Q5VV67 1664 aaKnown RBP18.73■□□□□ 0.59
PTPN7-211ENST00000479092 APLP2Q06481 763 aa18.71■□□□□ 0.59
PTPN7-211ENST00000479092 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
PTPN7-211ENST00000479092 KDM6BO15054 1643 aa18.67■□□□□ 0.58
PTPN7-211ENST00000479092 CFAP74Q9C0B2 1584 aa18.66■□□□□ 0.58
PTPN7-211ENST00000479092 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
PTPN7-211ENST00000479092 LRRC9Q6ZRR7 1453 aa18.65■□□□□ 0.58
PTPN7-211ENST00000479092 NEO1Q92859 1461 aa18.65■□□□□ 0.58
PTPN7-211ENST00000479092 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.58
PTPN7-211ENST00000479092 PLCH2O75038 1416 aa18.64■□□□□ 0.57
PTPN7-211ENST00000479092 FANCAO15360 1455 aa18.64■□□□□ 0.57
PTPN7-211ENST00000479092 ARHGAP5Q13017 1502 aa18.63■□□□□ 0.57
PTPN7-211ENST00000479092 PHLDB1Q86UU1 1377 aa18.62■□□□□ 0.57
PTPN7-211ENST00000479092 SUPT6HQ7KZ85 1726 aaKnown RBP18.62■□□□□ 0.57
PTPN7-211ENST00000479092 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
PTPN7-211ENST00000479092 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
PTPN7-211ENST00000479092 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms