RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 SHROOM2Q13796 1616 aa31.37■■■□□ 2.61
PLOD3-212ENST00000478082 FAM9AQ8IZU1 332 aaPredicted RBP31.34■■■□□ 2.61
PLOD3-212ENST00000478082 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
PLOD3-212ENST00000478082 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.6
PLOD3-212ENST00000478082 KIAA0586Q9BVV6 1533 aa31.31■■■□□ 2.6
PLOD3-212ENST00000478082 CSRNP3Q8WYN3 585 aa31.3■■■□□ 2.6
PLOD3-212ENST00000478082 JPH4Q96JJ6 628 aa31.3■■■□□ 2.6
PLOD3-212ENST00000478082 EEA1Q15075 1411 aa31.25■■■□□ 2.59
PLOD3-212ENST00000478082 PRG4Q92954 1404 aaPredicted RBP31.25■■■□□ 2.59
PLOD3-212ENST00000478082 IQGAP2Q13576 1575 aa31.17■■■□□ 2.58
PLOD3-212ENST00000478082 CTTNBP2Q8WZ74 1663 aa31.09■■■□□ 2.57
PLOD3-212ENST00000478082 EHMT2Q96KQ7 1210 aa31.01■■■□□ 2.56
PLOD3-212ENST00000478082 KIF21BO75037 1637 aa31.01■■■□□ 2.55
PLOD3-212ENST00000478082 DISP1Q96F81 1524 aa31■■■□□ 2.55
PLOD3-212ENST00000478082 UGGT2Q9NYU1 1516 aa31■■■□□ 2.55
PLOD3-212ENST00000478082 CARMIL2Q6F5E8 1435 aa30.94■■■□□ 2.54
PLOD3-212ENST00000478082 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
PLOD3-212ENST00000478082 KIAA0556O60303 1618 aa30.9■■■□□ 2.54
PLOD3-212ENST00000478082 TNIKQ9UKE5 1360 aa30.87■■■□□ 2.53
PLOD3-212ENST00000478082 PTPRGP23470 1445 aa30.86■■■□□ 2.53
PLOD3-212ENST00000478082 GOLGA3Q08378 1498 aa30.82■■■□□ 2.53
PLOD3-212ENST00000478082 RANGAP1P46060 587 aaPredicted RBP30.81■■■□□ 2.52
PLOD3-212ENST00000478082 ADCY10Q96PN6 1610 aa30.8■■■□□ 2.52
PLOD3-212ENST00000478082 UBTFP17480 764 aaKnown RBP30.77■■■□□ 2.52
PLOD3-212ENST00000478082 P3H3Q8IVL6 736 aa30.75■■■□□ 2.51
PLOD3-212ENST00000478082 SAMD9Q5K651 1589 aa30.72■■■□□ 2.51
PLOD3-212ENST00000478082 UACAQ9BZF9 1416 aa30.65■■■□□ 2.5
PLOD3-212ENST00000478082 PLB1Q6P1J6 1458 aa30.64■■■□□ 2.49
PLOD3-212ENST00000478082 TRHP20396 242 aaPredicted RBP30.63■■■□□ 2.49
PLOD3-212ENST00000478082 ABCC2Q92887 1545 aa30.61■■■□□ 2.49
PLOD3-212ENST00000478082 FHOD3Q2V2M9 1422 aa30.6■■■□□ 2.49
PLOD3-212ENST00000478082 UHRF1BP1LA0JNW5 1464 aa30.59■■■□□ 2.49
PLOD3-212ENST00000478082 NPM1P06748 294 aaKnown RBP eCLIP30.56■■■□□ 2.48
PLOD3-212ENST00000478082 ABCA8O94911 1581 aa30.55■■■□□ 2.48
PLOD3-212ENST00000478082 EFCAB5A4FU69 1503 aa30.53■■■□□ 2.48
PLOD3-212ENST00000478082 MAPKBP1O60336 1514 aa30.51■■■□□ 2.47
PLOD3-212ENST00000478082 ARHGAP35Q9NRY4 1499 aa30.5■■■□□ 2.47
PLOD3-212ENST00000478082 KDM5BQ9UGL1 1544 aa30.48■■■□□ 2.47
PLOD3-212ENST00000478082 ZCCHC11Q5TAX3 1644 aaKnown RBP30.46■■■□□ 2.47
PLOD3-212ENST00000478082 ARID3CA6NKF2 412 aa30.43■■■□□ 2.46
PLOD3-212ENST00000478082 LOC105371045A0A1W2PR82 267 aa30.41■■■□□ 2.46
PLOD3-212ENST00000478082 ASXL2Q76L83 1435 aa30.4■■■□□ 2.46
PLOD3-212ENST00000478082 RAPGEF6Q8TEU7 1601 aa30.4■■■□□ 2.46
PLOD3-212ENST00000478082 KIF13AQ9H1H9 1805 aa30.39■■■□□ 2.46
PLOD3-212ENST00000478082 ABCC10Q5T3U5 1492 aa30.38■■■□□ 2.45
PLOD3-212ENST00000478082 DIP2BQ9P265 1576 aa30.36■■■□□ 2.45
PLOD3-212ENST00000478082 FAM69CQ0P6D2 419 aa30.33■■■□□ 2.45
PLOD3-212ENST00000478082 ATP10BO94823 1461 aa30.32■■■□□ 2.44
PLOD3-212ENST00000478082 NUP153P49790 1475 aaKnown RBP30.32■■■□□ 2.44
PLOD3-212ENST00000478082 CLIP1P30622 1438 aa30.3■■■□□ 2.44
PLOD3-212ENST00000478082 FMN1Q68DA7 1419 aa30.24■■■□□ 2.43
PLOD3-212ENST00000478082 WDR7Q9Y4E6 1490 aa30.24■■■□□ 2.43
PLOD3-212ENST00000478082 EPRSP07814 1512 aaKnown RBP30.22■■■□□ 2.43
PLOD3-212ENST00000478082 CEP162Q5TB80 1403 aa30.21■■■□□ 2.43
PLOD3-212ENST00000478082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.18■■■□□ 2.42
PLOD3-212ENST00000478082 HNRNPUL2Q1KMD3 747 aaKnown RBP30.18■■■□□ 2.42
PLOD3-212ENST00000478082 ATP1B4Q9UN42 357 aaPredicted RBP30.16■■■□□ 2.42
PLOD3-212ENST00000478082 CDK13Q14004 1512 aaKnown RBP30.16■■■□□ 2.42
PLOD3-212ENST00000478082 GLI2P10070 1586 aa30.15■■■□□ 2.42
PLOD3-212ENST00000478082 KCNH8Q96L42 1107 aa30.15■■■□□ 2.42
PLOD3-212ENST00000478082 TSPOAP1O95153 1857 aa30.13■■■□□ 2.41
PLOD3-212ENST00000478082 PCF11O94913 1555 aaKnown RBP30.13■■■□□ 2.41
PLOD3-212ENST00000478082 HECW1Q76N89 1606 aa30.13■■■□□ 2.41
PLOD3-212ENST00000478082 LRRIQ1Q96JM4 1722 aa30.09■■■□□ 2.41
PLOD3-212ENST00000478082 MAP3K4Q9Y6R4 1608 aa30.06■■■□□ 2.4
PLOD3-212ENST00000478082 CASKIN1Q8WXD9 1431 aa30.06■■■□□ 2.4
PLOD3-212ENST00000478082 PPRC1Q5VV67 1664 aaKnown RBP30.05■■■□□ 2.4
PLOD3-212ENST00000478082 PLEKHD1A6NEE1 506 aa29.98■■■□□ 2.39
PLOD3-212ENST00000478082 FYCO1Q9BQS8 1478 aa29.98■■■□□ 2.39
PLOD3-212ENST00000478082 CD109Q6YHK3 1445 aa29.95■■■□□ 2.39
PLOD3-212ENST00000478082 CFAP43Q8NDM7 1665 aa29.95■■■□□ 2.38
PLOD3-212ENST00000478082 ABCA9Q8IUA7 1624 aa29.92■■■□□ 2.38
PLOD3-212ENST00000478082 CCDC18Q5T9S5 1454 aa29.89■■■□□ 2.37
PLOD3-212ENST00000478082 MAGI3Q5TCQ9 1506 aa29.87■■■□□ 2.37
PLOD3-212ENST00000478082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.87■■■□□ 2.374e-6■■■□□ 15.9
PLOD3-212ENST00000478082 TTC37Q6PGP7 1564 aa29.85■■■□□ 2.37
PLOD3-212ENST00000478082 KIF14Q15058 1648 aa29.83■■■□□ 2.37
PLOD3-212ENST00000478082 TEX14Q8IWB6 1497 aa29.83■■■□□ 2.37
PLOD3-212ENST00000478082 KDM6BO15054 1643 aa29.83■■■□□ 2.37
PLOD3-212ENST00000478082 TROQ12816 1431 aaPredicted RBP29.83■■■□□ 2.37
PLOD3-212ENST00000478082 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
PLOD3-212ENST00000478082 VPS8Q8N3P4 1428 aa29.81■■■□□ 2.36
PLOD3-212ENST00000478082 COL17A1Q9UMD9 1497 aaPredicted RBP29.81■■■□□ 2.36
PLOD3-212ENST00000478082 PLCH2O75038 1416 aa29.65■■■□□ 2.34
PLOD3-212ENST00000478082 FANCAO15360 1455 aa29.63■■■□□ 2.33
PLOD3-212ENST00000478082 MYO5CQ9NQX4 1742 aa29.63■■■□□ 2.33
PLOD3-212ENST00000478082 MTUS2Q5JR59 1369 aa29.63■■■□□ 2.33
PLOD3-212ENST00000478082 NEO1Q92859 1461 aa29.63■■■□□ 2.33
PLOD3-212ENST00000478082 TIAM1Q13009 1591 aa29.62■■■□□ 2.33
PLOD3-212ENST00000478082 ARAP3Q8WWN8 1544 aa29.6■■■□□ 2.33
PLOD3-212ENST00000478082 AKNAQ7Z591 1439 aa29.58■■■□□ 2.33
PLOD3-212ENST00000478082 EHBP1L1Q8N3D4 1523 aa29.57■■■□□ 2.32
PLOD3-212ENST00000478082 RAPGEF3O95398 923 aa29.55■■■□□ 2.32
PLOD3-212ENST00000478082 CDC42BPBQ9Y5S2 1711 aa29.55■■■□□ 2.32
PLOD3-212ENST00000478082 CFAP74Q9C0B2 1584 aa29.54■■■□□ 2.32
PLOD3-212ENST00000478082 PHLDB1Q86UU1 1377 aa29.54■■■□□ 2.32
PLOD3-212ENST00000478082 ARHGAP5Q13017 1502 aa29.54■■■□□ 2.32
PLOD3-212ENST00000478082 CDC42BPAQ5VT25 1732 aa29.53■■■□□ 2.32
PLOD3-212ENST00000478082 PREX2Q70Z35 1606 aa29.53■■■□□ 2.32
PLOD3-212ENST00000478082 KANK4Q5T7N3 995 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms