RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 NISCHQ9Y2I1 1504 aa45.33■■■■■ 4.85
PLOD3-212ENST00000478082 CCDC180Q9P1Z9 1646 aa40.18■■■■■ 4.02
PLOD3-212ENST00000478082 ABCC9O60706 1549 aa39.37■■■■□ 3.89
PLOD3-212ENST00000478082 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
PLOD3-212ENST00000478082 ZCCHC6Q5VYS8 1495 aaKnown RBP37.79■■■■□ 3.64
PLOD3-212ENST00000478082 RB1CC1Q8TDY2 1594 aa37.79■■■■□ 3.64
PLOD3-212ENST00000478082 NACADO15069 1562 aa37.75■■■■□ 3.63
PLOD3-212ENST00000478082 MYO15BQ96JP2 1530 aa37.52■■■■□ 3.6
PLOD3-212ENST00000478082 DCAF1Q9Y4B6 1507 aa37.43■■■■□ 3.58
PLOD3-212ENST00000478082 UNC13AQ9UPW8 1703 aa37.04■■■■□ 3.52
PLOD3-212ENST00000478082 PABPN1Q86U42 306 aaKnown RBP eCLIP36.85■■■■□ 3.49
PLOD3-212ENST00000478082 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
PLOD3-212ENST00000478082 BICRAQ9NZM4 1560 aa36.75■■■■□ 3.47
PLOD3-212ENST00000478082 SHROOM4Q9ULL8 1493 aa36.17■■■■□ 3.38
PLOD3-212ENST00000478082 DNAJC5BQ9UF47 199 aa36.13■■■■□ 3.37
PLOD3-212ENST00000478082 EIF4G1Q04637 1599 aaKnown RBP35.74■■■■□ 3.31
PLOD3-212ENST00000478082 CC2D2AQ9P2K1 1620 aa35.59■■■■□ 3.29
PLOD3-212ENST00000478082 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
PLOD3-212ENST00000478082 SMARCA4P51532 1647 aa35.16■■■■□ 3.22
PLOD3-212ENST00000478082 BAZ1AQ9NRL2 1556 aaPredicted RBP35.09■■■■□ 3.21
PLOD3-212ENST00000478082 MROH2BQ7Z745 1585 aa35.01■■■■□ 3.19
PLOD3-212ENST00000478082 ATAD2BQ9ULI0 1458 aa34.95■■■■□ 3.19
PLOD3-212ENST00000478082 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
PLOD3-212ENST00000478082 SMARCA2P51531 1590 aa34.84■■■■□ 3.17
PLOD3-212ENST00000478082 PEG3Q9GZU2 1588 aa34.77■■■■□ 3.16
PLOD3-212ENST00000478082 HMGXB3Q12766 1538 aa34.69■■■■□ 3.14
PLOD3-212ENST00000478082 BAZ1BQ9UIG0 1483 aaKnown RBP34.65■■■■□ 3.14
PLOD3-212ENST00000478082 WIZO95785 1651 aa34.64■■■■□ 3.14
PLOD3-212ENST00000478082 RSF1Q96T23 1441 aaPredicted RBP34.61■■■■□ 3.13
PLOD3-212ENST00000478082 TOP2AP11388 1531 aaKnown RBP34.21■■■■□ 3.07
PLOD3-212ENST00000478082 NESP48681 1621 aa34.14■■■■□ 3.06
PLOD3-212ENST00000478082 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
PLOD3-212ENST00000478082 CADPSQ9ULU8 1353 aa33.88■■■■□ 3.01
PLOD3-212ENST00000478082 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
PLOD3-212ENST00000478082 ERCC6Q03468 1493 aa33.85■■■■□ 3.01
PLOD3-212ENST00000478082 CCDC88BA6NC98 1476 aa33.85■■■■□ 3.01
PLOD3-212ENST00000478082 CFTRP13569 1480 aa33.7■■■□□ 2.99
PLOD3-212ENST00000478082 KIF21AQ7Z4S6 1674 aa33.69■■■□□ 2.98
PLOD3-212ENST00000478082 PDS5BQ9NTI5 1447 aa33.67■■■□□ 2.98
PLOD3-212ENST00000478082 THOC2Q8NI27 1593 aaKnown RBP33.53■■■□□ 2.96
PLOD3-212ENST00000478082 FANCD2Q9BXW9 1451 aa33.51■■■□□ 2.96
PLOD3-212ENST00000478082 CEP164Q9UPV0 1460 aa33.43■■■□□ 2.94
PLOD3-212ENST00000478082 PRDM2Q13029 1718 aa33.41■■■□□ 2.94
PLOD3-212ENST00000478082 CUX2O14529 1486 aa33.41■■■□□ 2.94
PLOD3-212ENST00000478082 MRC2Q9UBG0 1479 aa33.37■■■□□ 2.93
PLOD3-212ENST00000478082 WDR62O43379 1518 aa33.27■■■□□ 2.92
PLOD3-212ENST00000478082 URB2Q14146 1524 aaKnown RBP33.22■■■□□ 2.91
PLOD3-212ENST00000478082 TOPBP1Q92547 1522 aa32.99■■■□□ 2.87
PLOD3-212ENST00000478082 DNMBPQ6XZF7 1577 aa32.94■■■□□ 2.86
PLOD3-212ENST00000478082 ABCC8Q09428 1581 aa32.86■■■□□ 2.85
PLOD3-212ENST00000478082 CUX1P39880 1505 aa32.83■■■□□ 2.85
PLOD3-212ENST00000478082 POLA1P09884 1462 aaPredicted RBP32.73■■■□□ 2.83
PLOD3-212ENST00000478082 IFT140Q96RY7 1462 aa32.71■■■□□ 2.83
PLOD3-212ENST00000478082 FGD5Q6ZNL6 1462 aa32.68■■■□□ 2.82
PLOD3-212ENST00000478082 ZNF608Q9ULD9 1512 aaPredicted RBP32.68■■■□□ 2.82
PLOD3-212ENST00000478082 RAD54L2Q9Y4B4 1467 aa32.65■■■□□ 2.82
PLOD3-212ENST00000478082 TARBP1Q13395 1621 aaKnown RBP32.63■■■□□ 2.81
PLOD3-212ENST00000478082 WRNQ14191 1432 aaPredicted RBP eCLIP32.59■■■□□ 2.81
PLOD3-212ENST00000478082 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
PLOD3-212ENST00000478082 SOGA1O94964 1423 aa32.57■■■□□ 2.8
PLOD3-212ENST00000478082 TOP2BQ02880 1626 aa32.51■■■□□ 2.79
PLOD3-212ENST00000478082 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
PLOD3-212ENST00000478082 EIF4G3O43432 1585 aaKnown RBP32.5■■■□□ 2.79
PLOD3-212ENST00000478082 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.794e-7■■■■■ 31.6
PLOD3-212ENST00000478082 TDRD9Q8NDG6 1382 aaKnown RBP32.44■■■□□ 2.78
PLOD3-212ENST00000478082 WDR97A6NE52 1622 aa32.39■■■□□ 2.78
PLOD3-212ENST00000478082 ABCA10Q8WWZ4 1543 aa32.32■■■□□ 2.76
PLOD3-212ENST00000478082 DNAJC5Q9H3Z4 198 aa32.32■■■□□ 2.76
PLOD3-212ENST00000478082 ABCA5Q8WWZ7 1642 aa32.21■■■□□ 2.75
PLOD3-212ENST00000478082 GAPVD1Q14C86 1478 aa32.2■■■□□ 2.74
PLOD3-212ENST00000478082 SNAPC4Q5SXM2 1469 aa32.17■■■□□ 2.74
PLOD3-212ENST00000478082 GRIN2BQ13224 1484 aa32.15■■■□□ 2.74
PLOD3-212ENST00000478082 PBRM1Q86U86 1689 aa32.14■■■□□ 2.74
PLOD3-212ENST00000478082 CHD1O14646 1710 aa32.07■■■□□ 2.72
PLOD3-212ENST00000478082 OSCARQ8IYS5 282 aa32.06■■■□□ 2.72
PLOD3-212ENST00000478082 FBLN2P98095 1184 aa32.05■■■□□ 2.72
PLOD3-212ENST00000478082 MAGI1Q96QZ7 1491 aaPredicted RBP32.03■■■□□ 2.72
PLOD3-212ENST00000478082 SYNJ2O15056 1496 aa31.94■■■□□ 2.7
PLOD3-212ENST00000478082 CHMP7Q8WUX9 453 aaPredicted RBP31.92■■■□□ 2.7
PLOD3-212ENST00000478082 ERICH3Q5RHP9 1530 aa31.91■■■□□ 2.7
PLOD3-212ENST00000478082 ADAMTS12P58397 1594 aa31.89■■■□□ 2.7
PLOD3-212ENST00000478082 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
PLOD3-212ENST00000478082 KIF27Q86VH2 1401 aa31.87■■■□□ 2.69
PLOD3-212ENST00000478082 FHAD1B1AJZ9 1412 aa31.8■■■□□ 2.68
PLOD3-212ENST00000478082 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
PLOD3-212ENST00000478082 IGF1RP08069 1367 aa31.78■■■□□ 2.68
PLOD3-212ENST00000478082 GRIN2AQ12879 1464 aa31.77■■■□□ 2.68
PLOD3-212ENST00000478082 CLASP1Q7Z460 1538 aa31.72■■■□□ 2.67
PLOD3-212ENST00000478082 CEP170Q5SW79 1584 aa31.66■■■□□ 2.66
PLOD3-212ENST00000478082 CHIC1Q5VXU3 224 aa31.64■■■□□ 2.65
PLOD3-212ENST00000478082 CUL7Q14999 1698 aa31.62■■■□□ 2.65
PLOD3-212ENST00000478082 NUP160Q12769 1436 aa31.62■■■□□ 2.65
PLOD3-212ENST00000478082 RIMBP3CA6NJZ7 1639 aa31.61■■■□□ 2.65
PLOD3-212ENST00000478082 RIMBP3BA6NNM3 1639 aa31.61■■■□□ 2.65
PLOD3-212ENST00000478082 RIMBP3Q9UFD9 1639 aa31.61■■■□□ 2.65
PLOD3-212ENST00000478082 ARHGEF11O15085 1522 aa31.61■■■□□ 2.65
PLOD3-212ENST00000478082 CARMIL1Q5VZK9 1371 aa31.57■■■□□ 2.64
PLOD3-212ENST00000478082 ARAP1Q96P48 1450 aa31.39■■■□□ 2.62
PLOD3-212ENST00000478082 ERCC6L2Q5T890 1561 aa31.39■■■□□ 2.62
PLOD3-212ENST00000478082 RAPGEF2Q9Y4G8 1499 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms