RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 ERCC6L2Q5T890 1561 aa13.99□□□□□ -0.17
RBBP4-211ENST00000477563 ADAMTS12P58397 1594 aa13.98□□□□□ -0.17
RBBP4-211ENST00000477563 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
RBBP4-211ENST00000477563 CEP170Q5SW79 1584 aa13.97□□□□□ -0.17
RBBP4-211ENST00000477563 BIVM-ERCC5R4GMW8 1640 aa13.96□□□□□ -0.17
RBBP4-211ENST00000477563 WRNQ14191 1432 aaPredicted RBP eCLIP13.95□□□□□ -0.18
RBBP4-211ENST00000477563 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
RBBP4-211ENST00000477563 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
RBBP4-211ENST00000477563 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
RBBP4-211ENST00000477563 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
RBBP4-211ENST00000477563 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
RBBP4-211ENST00000477563 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
RBBP4-211ENST00000477563 JPH4Q96JJ6 628 aa13.8□□□□□ -0.2
RBBP4-211ENST00000477563 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
RBBP4-211ENST00000477563 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
RBBP4-211ENST00000477563 ABCC10Q5T3U5 1492 aa13.78□□□□□ -0.2
RBBP4-211ENST00000477563 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
RBBP4-211ENST00000477563 ADCY10Q96PN6 1610 aa13.74□□□□□ -0.21
RBBP4-211ENST00000477563 DIP2BQ9P265 1576 aa13.74□□□□□ -0.21
RBBP4-211ENST00000477563 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
RBBP4-211ENST00000477563 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
RBBP4-211ENST00000477563 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
RBBP4-211ENST00000477563 CUL7Q14999 1698 aa13.68□□□□□ -0.22
RBBP4-211ENST00000477563 KDM6BO15054 1643 aa13.66□□□□□ -0.22
RBBP4-211ENST00000477563 IGF1RP08069 1367 aa13.65□□□□□ -0.22
RBBP4-211ENST00000477563 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
RBBP4-211ENST00000477563 TSPOAP1O95153 1857 aa13.62□□□□□ -0.23
RBBP4-211ENST00000477563 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
RBBP4-211ENST00000477563 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
RBBP4-211ENST00000477563 GLI2P10070 1586 aa13.58□□□□□ -0.23
RBBP4-211ENST00000477563 PPRC1Q5VV67 1664 aaKnown RBP13.57□□□□□ -0.24
RBBP4-211ENST00000477563 ABCC2Q92887 1545 aa13.57□□□□□ -0.24
RBBP4-211ENST00000477563 PTPRGP23470 1445 aa13.56□□□□□ -0.24
RBBP4-211ENST00000477563 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
RBBP4-211ENST00000477563 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
RBBP4-211ENST00000477563 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
RBBP4-211ENST00000477563 CARMIL2Q6F5E8 1435 aa13.54□□□□□ -0.24
RBBP4-211ENST00000477563 PLB1Q6P1J6 1458 aa13.54□□□□□ -0.24
RBBP4-211ENST00000477563 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
RBBP4-211ENST00000477563 IQGAP2Q13576 1575 aa13.52□□□□□ -0.25
RBBP4-211ENST00000477563 ASXL2Q76L83 1435 aa13.51□□□□□ -0.25
RBBP4-211ENST00000477563 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
RBBP4-211ENST00000477563 DISP1Q96F81 1524 aa13.49□□□□□ -0.25
RBBP4-211ENST00000477563 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
RBBP4-211ENST00000477563 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
RBBP4-211ENST00000477563 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
RBBP4-211ENST00000477563 EPRSP07814 1512 aaKnown RBP13.45□□□□□ -0.26
RBBP4-211ENST00000477563 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
RBBP4-211ENST00000477563 COL17A1Q9UMD9 1497 aaPredicted RBP13.44□□□□□ -0.26
RBBP4-211ENST00000477563 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
RBBP4-211ENST00000477563 ZCCHC11Q5TAX3 1644 aaKnown RBP13.43□□□□□ -0.26
RBBP4-211ENST00000477563 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
RBBP4-211ENST00000477563 TEX14Q8IWB6 1497 aa13.42□□□□□ -0.26
RBBP4-211ENST00000477563 KIAA0556O60303 1618 aa13.41□□□□□ -0.26
RBBP4-211ENST00000477563 RAPGEF2Q9Y4G8 1499 aa13.4□□□□□ -0.26
RBBP4-211ENST00000477563 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
RBBP4-211ENST00000477563 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
RBBP4-211ENST00000477563 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
RBBP4-211ENST00000477563 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
RBBP4-211ENST00000477563 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
RBBP4-211ENST00000477563 CTTNBP2Q8WZ74 1663 aa13.34□□□□□ -0.27
RBBP4-211ENST00000477563 MAGI3Q5TCQ9 1506 aa13.34□□□□□ -0.27
RBBP4-211ENST00000477563 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
RBBP4-211ENST00000477563 ABCA8O94911 1581 aa13.32□□□□□ -0.28
RBBP4-211ENST00000477563 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
RBBP4-211ENST00000477563 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
RBBP4-211ENST00000477563 ARAP3Q8WWN8 1544 aa13.25□□□□□ -0.29
RBBP4-211ENST00000477563 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
RBBP4-211ENST00000477563 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
RBBP4-211ENST00000477563 KIF21BO75037 1637 aa13.22□□□□□ -0.29
RBBP4-211ENST00000477563 ABCA9Q8IUA7 1624 aa13.2□□□□□ -0.3
RBBP4-211ENST00000477563 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
RBBP4-211ENST00000477563 ADAMTSL3P82987 1691 aa13.19□□□□□ -0.3
RBBP4-211ENST00000477563 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
RBBP4-211ENST00000477563 ATP10BO94823 1461 aa13.18□□□□□ -0.3
RBBP4-211ENST00000477563 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
RBBP4-211ENST00000477563 NEO1Q92859 1461 aa13.14□□□□□ -0.31
RBBP4-211ENST00000477563 PTPRMP28827 1452 aa13.13□□□□□ -0.31
RBBP4-211ENST00000477563 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
RBBP4-211ENST00000477563 KCNA4P22459 653 aa13.12□□□□□ -0.31
RBBP4-211ENST00000477563 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
RBBP4-211ENST00000477563 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
RBBP4-211ENST00000477563 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
RBBP4-211ENST00000477563 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
RBBP4-211ENST00000477563 RICTORQ6R327 1708 aa13.07□□□□□ -0.32
RBBP4-211ENST00000477563 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
RBBP4-211ENST00000477563 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
RBBP4-211ENST00000477563 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
RBBP4-211ENST00000477563 NUP153P49790 1475 aaKnown RBP13.05□□□□□ -0.32
RBBP4-211ENST00000477563 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
RBBP4-211ENST00000477563 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
RBBP4-211ENST00000477563 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
RBBP4-211ENST00000477563 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
RBBP4-211ENST00000477563 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
RBBP4-211ENST00000477563 FHOD3Q2V2M9 1422 aa13.03□□□□□ -0.32
RBBP4-211ENST00000477563 ARID3CA6NKF2 412 aa13.02□□□□□ -0.33
RBBP4-211ENST00000477563 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
RBBP4-211ENST00000477563 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
RBBP4-211ENST00000477563 DENND4BO75064 1496 aaPredicted RBP13.01□□□□□ -0.33
RBBP4-211ENST00000477563 ZMYM4Q5VZL5 1548 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms