RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
RTFDC1-206ENST00000477485 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
RTFDC1-206ENST00000477485 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
RTFDC1-206ENST00000477485 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
RTFDC1-206ENST00000477485 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
RTFDC1-206ENST00000477485 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
RTFDC1-206ENST00000477485 DIP2BQ9P265 1576 aa11.84□□□□□ -0.51
RTFDC1-206ENST00000477485 KDM6BO15054 1643 aa11.82□□□□□ -0.52
RTFDC1-206ENST00000477485 CUL7Q14999 1698 aa11.82□□□□□ -0.52
RTFDC1-206ENST00000477485 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-206ENST00000477485 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
RTFDC1-206ENST00000477485 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
RTFDC1-206ENST00000477485 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
RTFDC1-206ENST00000477485 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
RTFDC1-206ENST00000477485 IGF1RP08069 1367 aa11.7□□□□□ -0.54
RTFDC1-206ENST00000477485 IQGAP2Q13576 1575 aa11.7□□□□□ -0.54
RTFDC1-206ENST00000477485 PTPRGP23470 1445 aa11.69□□□□□ -0.54
RTFDC1-206ENST00000477485 CARMIL2Q6F5E8 1435 aa11.69□□□□□ -0.54
RTFDC1-206ENST00000477485 PPRC1Q5VV67 1664 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-206ENST00000477485 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
RTFDC1-206ENST00000477485 ABCC2Q92887 1545 aa11.66□□□□□ -0.54
RTFDC1-206ENST00000477485 TNIKQ9UKE5 1360 aa11.66□□□□□ -0.54
RTFDC1-206ENST00000477485 ASXL2Q76L83 1435 aa11.65□□□□□ -0.54
RTFDC1-206ENST00000477485 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
RTFDC1-206ENST00000477485 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-206ENST00000477485 PLB1Q6P1J6 1458 aa11.63□□□□□ -0.55
RTFDC1-206ENST00000477485 CTTNBP2Q8WZ74 1663 aa11.62□□□□□ -0.55
RTFDC1-206ENST00000477485 GLI2P10070 1586 aa11.62□□□□□ -0.55
RTFDC1-206ENST00000477485 MAP3K4Q9Y6R4 1608 aa11.61□□□□□ -0.55
RTFDC1-206ENST00000477485 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
RTFDC1-206ENST00000477485 ADGRL1O94910 1474 aa11.6□□□□□ -0.55
RTFDC1-206ENST00000477485 KIAA0556O60303 1618 aa11.6□□□□□ -0.55
RTFDC1-206ENST00000477485 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
RTFDC1-206ENST00000477485 DISP1Q96F81 1524 aa11.59□□□□□ -0.55
RTFDC1-206ENST00000477485 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-206ENST00000477485 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
RTFDC1-206ENST00000477485 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
RTFDC1-206ENST00000477485 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
RTFDC1-206ENST00000477485 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
RTFDC1-206ENST00000477485 CFAP43Q8NDM7 1665 aa11.52□□□□□ -0.56
RTFDC1-206ENST00000477485 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-206ENST00000477485 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
RTFDC1-206ENST00000477485 HECW2Q9P2P5 1572 aa11.51□□□□□ -0.57
RTFDC1-206ENST00000477485 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-206ENST00000477485 ILDR1Q86SU0 546 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-206ENST00000477485 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
RTFDC1-206ENST00000477485 KIF21BO75037 1637 aa11.49□□□□□ -0.57
RTFDC1-206ENST00000477485 GOLGA3Q08378 1498 aa11.48□□□□□ -0.57
RTFDC1-206ENST00000477485 ABCA8O94911 1581 aa11.46□□□□□ -0.57
RTFDC1-206ENST00000477485 CD109Q6YHK3 1445 aa11.45□□□□□ -0.58
RTFDC1-206ENST00000477485 ARID3CA6NKF2 412 aa11.45□□□□□ -0.58
RTFDC1-206ENST00000477485 FAM9AQ8IZU1 332 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-206ENST00000477485 MAGI3Q5TCQ9 1506 aa11.42□□□□□ -0.58
RTFDC1-206ENST00000477485 P3H3Q8IVL6 736 aa11.41□□□□□ -0.58
RTFDC1-206ENST00000477485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-206ENST00000477485 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-206ENST00000477485 RAPGEF6Q8TEU7 1601 aa11.37□□□□□ -0.59
RTFDC1-206ENST00000477485 ABCA9Q8IUA7 1624 aa11.36□□□□□ -0.59
RTFDC1-206ENST00000477485 RANGAP1P46060 587 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-206ENST00000477485 PRXQ9BXM0 1461 aa11.36□□□□□ -0.59
RTFDC1-206ENST00000477485 SAMD9Q5K651 1589 aa11.34□□□□□ -0.59
RTFDC1-206ENST00000477485 ATP10BO94823 1461 aa11.34□□□□□ -0.59
RTFDC1-206ENST00000477485 ARAP3Q8WWN8 1544 aa11.34□□□□□ -0.59
RTFDC1-206ENST00000477485 ADAMTSL3P82987 1691 aa11.32□□□□□ -0.6
RTFDC1-206ENST00000477485 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-206ENST00000477485 BCORL1Q5H9F3 1711 aa11.32□□□□□ -0.6
RTFDC1-206ENST00000477485 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
RTFDC1-206ENST00000477485 RIMS1Q86UR5 1692 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-206ENST00000477485 RAPGEF3O95398 923 aa11.3□□□□□ -0.6
RTFDC1-206ENST00000477485 FRMPD1Q5SYB0 1578 aa11.29□□□□□ -0.6
RTFDC1-206ENST00000477485 PTPRMP28827 1452 aa11.29□□□□□ -0.6
RTFDC1-206ENST00000477485 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
RTFDC1-206ENST00000477485 NEO1Q92859 1461 aa11.28□□□□□ -0.6
RTFDC1-206ENST00000477485 PLPPR3Q6T4P5 718 aa11.28□□□□□ -0.6
RTFDC1-206ENST00000477485 RICTORQ6R327 1708 aa11.27□□□□□ -0.61
RTFDC1-206ENST00000477485 PHLDB1Q86UU1 1377 aa11.27□□□□□ -0.61
RTFDC1-206ENST00000477485 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
RTFDC1-206ENST00000477485 ARHGEF40Q8TER5 1519 aa11.26□□□□□ -0.61
RTFDC1-206ENST00000477485 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-206ENST00000477485 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
RTFDC1-206ENST00000477485 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-206ENST00000477485 FER1L4A9Z1Z3 1794 aa11.24□□□□□ -0.61
RTFDC1-206ENST00000477485 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
RTFDC1-206ENST00000477485 FBXO41Q8TF61 875 aa11.23□□□□□ -0.61
RTFDC1-206ENST00000477485 DENND4BO75064 1496 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-206ENST00000477485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.21□□□□□ -0.61
RTFDC1-206ENST00000477485 FANCAO15360 1455 aa11.21□□□□□ -0.61
RTFDC1-206ENST00000477485 PLEKHD1A6NEE1 506 aa11.21□□□□□ -0.61
RTFDC1-206ENST00000477485 SIGLEC1Q9BZZ2 1709 aa11.21□□□□□ -0.62
RTFDC1-206ENST00000477485 ZFYVE16Q7Z3T8 1539 aa11.2□□□□□ -0.62
RTFDC1-206ENST00000477485 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
RTFDC1-206ENST00000477485 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
RTFDC1-206ENST00000477485 MYO5CQ9NQX4 1742 aa11.2□□□□□ -0.62
RTFDC1-206ENST00000477485 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
RTFDC1-206ENST00000477485 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
RTFDC1-206ENST00000477485 MLECQ14165 292 aa11.19□□□□□ -0.62
RTFDC1-206ENST00000477485 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-206ENST00000477485 POGZQ7Z3K3 1410 aa11.18□□□□□ -0.62
RTFDC1-206ENST00000477485 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
RTFDC1-206ENST00000477485 EEA1Q15075 1411 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms