RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PRG4Q92954 1404 aaPredicted RBP20.46■□□□□ 0.87
LSM2-212ENST00000477182 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
LSM2-212ENST00000477182 DIP2BQ9P265 1576 aa20.43■□□□□ 0.86
LSM2-212ENST00000477182 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
LSM2-212ENST00000477182 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
LSM2-212ENST00000477182 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
LSM2-212ENST00000477182 TSPOAP1O95153 1857 aa20.33■□□□□ 0.85
LSM2-212ENST00000477182 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
LSM2-212ENST00000477182 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
LSM2-212ENST00000477182 BIVM-ERCC5R4GMW8 1640 aa20.25■□□□□ 0.83
LSM2-212ENST00000477182 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
LSM2-212ENST00000477182 ADGRL1O94910 1474 aa20.22■□□□□ 0.83
LSM2-212ENST00000477182 HECW2Q9P2P5 1572 aa20.17■□□□□ 0.82
LSM2-212ENST00000477182 KIAA0586Q9BVV6 1533 aa20.12■□□□□ 0.81
LSM2-212ENST00000477182 GLI2P10070 1586 aa20.09■□□□□ 0.81
LSM2-212ENST00000477182 PPRC1Q5VV67 1664 aaKnown RBP20.09■□□□□ 0.81
LSM2-212ENST00000477182 PLB1Q6P1J6 1458 aa20.08■□□□□ 0.81
LSM2-212ENST00000477182 PTPRGP23470 1445 aa20.07■□□□□ 0.8
LSM2-212ENST00000477182 ABCC2Q92887 1545 aa20.05■□□□□ 0.8
LSM2-212ENST00000477182 ASXL2Q76L83 1435 aa20.04■□□□□ 0.8
LSM2-212ENST00000477182 FBXO41Q8TF61 875 aa20.03■□□□□ 0.8
LSM2-212ENST00000477182 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
LSM2-212ENST00000477182 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
LSM2-212ENST00000477182 TNIKQ9UKE5 1360 aa19.97■□□□□ 0.79
LSM2-212ENST00000477182 CARMIL2Q6F5E8 1435 aa19.97■□□□□ 0.79
LSM2-212ENST00000477182 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
LSM2-212ENST00000477182 CUL7Q14999 1698 aa19.95■□□□□ 0.78
LSM2-212ENST00000477182 MAP3K4Q9Y6R4 1608 aa19.94■□□□□ 0.78
LSM2-212ENST00000477182 UHRF1BP1LA0JNW5 1464 aa19.94■□□□□ 0.78
LSM2-212ENST00000477182 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
LSM2-212ENST00000477182 IGF1RP08069 1367 aa19.91■□□□□ 0.78
LSM2-212ENST00000477182 UACAQ9BZF9 1416 aa19.89■□□□□ 0.77
LSM2-212ENST00000477182 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
LSM2-212ENST00000477182 KDM5BQ9UGL1 1544 aa19.85■□□□□ 0.77
LSM2-212ENST00000477182 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
LSM2-212ENST00000477182 ZCCHC11Q5TAX3 1644 aaKnown RBP19.79■□□□□ 0.76
LSM2-212ENST00000477182 CARMIL1Q5VZK9 1371 aa19.78■□□□□ 0.76
LSM2-212ENST00000477182 WDR7Q9Y4E6 1490 aa19.74■□□□□ 0.75
LSM2-212ENST00000477182 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
LSM2-212ENST00000477182 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
LSM2-212ENST00000477182 CD109Q6YHK3 1445 aa19.71■□□□□ 0.75
LSM2-212ENST00000477182 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
LSM2-212ENST00000477182 KIF21BO75037 1637 aa19.7■□□□□ 0.74
LSM2-212ENST00000477182 LMTK3Q96Q04 1460 aa19.69■□□□□ 0.74
LSM2-212ENST00000477182 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
LSM2-212ENST00000477182 PTPRMP28827 1452 aa19.65■□□□□ 0.74
LSM2-212ENST00000477182 KIAA0556O60303 1618 aa19.62■□□□□ 0.73
LSM2-212ENST00000477182 ADAMTSL3P82987 1691 aa19.61■□□□□ 0.73
LSM2-212ENST00000477182 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
LSM2-212ENST00000477182 ARAP3Q8WWN8 1544 aa19.6■□□□□ 0.73
LSM2-212ENST00000477182 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
LSM2-212ENST00000477182 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
LSM2-212ENST00000477182 RAPGEF2Q9Y4G8 1499 aa19.52■□□□□ 0.72
LSM2-212ENST00000477182 SOCS7O14512 581 aa19.5■□□□□ 0.71
LSM2-212ENST00000477182 BCORL1Q5H9F3 1711 aa19.5■□□□□ 0.71
LSM2-212ENST00000477182 ABCA8O94911 1581 aa19.49■□□□□ 0.71
LSM2-212ENST00000477182 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
LSM2-212ENST00000477182 MADDQ8WXG6 1647 aa19.47■□□□□ 0.71
LSM2-212ENST00000477182 CERKQ8TCT0 537 aa19.46■□□□□ 0.71
LSM2-212ENST00000477182 ARID4BQ4LE39 1312 aaPredicted RBP19.46■□□□□ 0.71
LSM2-212ENST00000477182 DISP3Q9P2K9 1392 aa19.44■□□□□ 0.7
LSM2-212ENST00000477182 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
LSM2-212ENST00000477182 RAPGEF3O95398 923 aa19.41■□□□□ 0.7
LSM2-212ENST00000477182 ILDR2Q71H61 639 aa19.41■□□□□ 0.7
LSM2-212ENST00000477182 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
LSM2-212ENST00000477182 CTTNBP2Q8WZ74 1663 aa19.4■□□□□ 0.7
LSM2-212ENST00000477182 NEO1Q92859 1461 aa19.4■□□□□ 0.7
LSM2-212ENST00000477182 ABCA9Q8IUA7 1624 aa19.4■□□□□ 0.7
LSM2-212ENST00000477182 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.69
LSM2-212ENST00000477182 HSPA2P54652 639 aa19.38■□□□□ 0.69
LSM2-212ENST00000477182 FRMPD1Q5SYB0 1578 aa19.33■□□□□ 0.69
LSM2-212ENST00000477182 ATP10BO94823 1461 aa19.32■□□□□ 0.68
LSM2-212ENST00000477182 POGZQ7Z3K3 1410 aa19.32■□□□□ 0.68
LSM2-212ENST00000477182 ARHGEF40Q8TER5 1519 aa19.3■□□□□ 0.68
LSM2-212ENST00000477182 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
LSM2-212ENST00000477182 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
LSM2-212ENST00000477182 FANCAO15360 1455 aa19.27■□□□□ 0.67
LSM2-212ENST00000477182 DENND4BO75064 1496 aaPredicted RBP19.25■□□□□ 0.67
LSM2-212ENST00000477182 SPATA31D1Q6ZQQ2 1576 aa19.24■□□□□ 0.67
LSM2-212ENST00000477182 AKNAQ7Z591 1439 aa19.24■□□□□ 0.67
LSM2-212ENST00000477182 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
LSM2-212ENST00000477182 RICTORQ6R327 1708 aa19.22■□□□□ 0.67
LSM2-212ENST00000477182 FHOD3Q2V2M9 1422 aa19.21■□□□□ 0.67
LSM2-212ENST00000477182 FER1L4A9Z1Z3 1794 aa19.19■□□□□ 0.66
LSM2-212ENST00000477182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
LSM2-212ENST00000477182 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
LSM2-212ENST00000477182 TTC37Q6PGP7 1564 aa19.19■□□□□ 0.66
LSM2-212ENST00000477182 CFAP74Q9C0B2 1584 aa19.19■□□□□ 0.66
LSM2-212ENST00000477182 YEATS2Q9ULM3 1422 aa19.18■□□□□ 0.66
LSM2-212ENST00000477182 EFCAB5A4FU69 1503 aa19.18■□□□□ 0.66
LSM2-212ENST00000477182 ZMYM4Q5VZL5 1548 aa19.17■□□□□ 0.66
LSM2-212ENST00000477182 PREX1Q8TCU6 1659 aa19.17■□□□□ 0.66
LSM2-212ENST00000477182 ZFYVE16Q7Z3T8 1539 aa19.16■□□□□ 0.66
LSM2-212ENST00000477182 RAPGEF6Q8TEU7 1601 aa19.16■□□□□ 0.66
LSM2-212ENST00000477182 MAGI2Q86UL8 1455 aa19.16■□□□□ 0.66
LSM2-212ENST00000477182 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
LSM2-212ENST00000477182 MLECQ14165 292 aa19.14■□□□□ 0.65
LSM2-212ENST00000477182 SIGLEC1Q9BZZ2 1709 aa19.12■□□□□ 0.65
LSM2-212ENST00000477182 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
LSM2-212ENST00000477182 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms