RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
SEC22A-205ENST00000477063 SYNJ2O15056 1496 aa20.89■□□□□ 0.94
SEC22A-205ENST00000477063 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
SEC22A-205ENST00000477063 GRIN2AQ12879 1464 aa20.85■□□□□ 0.93
SEC22A-205ENST00000477063 ARAP1Q96P48 1450 aa20.85■□□□□ 0.93
SEC22A-205ENST00000477063 IQGAP2Q13576 1575 aa20.81■□□□□ 0.92
SEC22A-205ENST00000477063 SAMD9Q5K651 1589 aa20.8■□□□□ 0.92
SEC22A-205ENST00000477063 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
SEC22A-205ENST00000477063 UGGT2Q9NYU1 1516 aa20.75■□□□□ 0.91
SEC22A-205ENST00000477063 NUP160Q12769 1436 aa20.74■□□□□ 0.91
SEC22A-205ENST00000477063 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
SEC22A-205ENST00000477063 MAP3K1Q13233 1512 aa20.72■□□□□ 0.91
SEC22A-205ENST00000477063 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
SEC22A-205ENST00000477063 TRIM26Q12899 539 aaPredicted RBP20.7■□□□□ 0.9
SEC22A-205ENST00000477063 APLP2Q06481 763 aa20.68■□□□□ 0.9
SEC22A-205ENST00000477063 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
SEC22A-205ENST00000477063 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
SEC22A-205ENST00000477063 FYCO1Q9BQS8 1478 aa20.64■□□□□ 0.89
SEC22A-205ENST00000477063 CASKIN1Q8WXD9 1431 aa20.61■□□□□ 0.89
SEC22A-205ENST00000477063 CHD1O14646 1710 aa20.61■□□□□ 0.89
SEC22A-205ENST00000477063 FHOD3Q2V2M9 1422 aa20.61■□□□□ 0.89
SEC22A-205ENST00000477063 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
SEC22A-205ENST00000477063 PCF11O94913 1555 aaKnown RBP20.56■□□□□ 0.88
SEC22A-205ENST00000477063 CFAP43Q8NDM7 1665 aa20.56■□□□□ 0.88
SEC22A-205ENST00000477063 DISP1Q96F81 1524 aa20.55■□□□□ 0.88
SEC22A-205ENST00000477063 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
SEC22A-205ENST00000477063 CARMIL2Q6F5E8 1435 aa20.54■□□□□ 0.88
SEC22A-205ENST00000477063 FBLN2P98095 1184 aa20.53■□□□□ 0.88
SEC22A-205ENST00000477063 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
SEC22A-205ENST00000477063 HECW1Q76N89 1606 aa20.49■□□□□ 0.87
SEC22A-205ENST00000477063 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
SEC22A-205ENST00000477063 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
SEC22A-205ENST00000477063 P3H3Q8IVL6 736 aa20.47■□□□□ 0.87
SEC22A-205ENST00000477063 JPH4Q96JJ6 628 aa20.47■□□□□ 0.87
SEC22A-205ENST00000477063 LRRC9Q6ZRR7 1453 aa20.43■□□□□ 0.86
SEC22A-205ENST00000477063 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
SEC22A-205ENST00000477063 RAPGEF6Q8TEU7 1601 aa20.38■□□□□ 0.85
SEC22A-205ENST00000477063 LRRIQ1Q96JM4 1722 aa20.36■□□□□ 0.85
SEC22A-205ENST00000477063 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
SEC22A-205ENST00000477063 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
SEC22A-205ENST00000477063 EPRSP07814 1512 aaKnown RBP20.34■□□□□ 0.85
SEC22A-205ENST00000477063 EHBP1L1Q8N3D4 1523 aa20.34■□□□□ 0.85
SEC22A-205ENST00000477063 KANK4Q5T7N3 995 aaPredicted RBP20.33■□□□□ 0.85
SEC22A-205ENST00000477063 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
SEC22A-205ENST00000477063 ABCA8O94911 1581 aa20.3■□□□□ 0.84
SEC22A-205ENST00000477063 NUP153P49790 1475 aaKnown RBP20.28■□□□□ 0.84
SEC22A-205ENST00000477063 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.84
SEC22A-205ENST00000477063 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
SEC22A-205ENST00000477063 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
SEC22A-205ENST00000477063 PTPRGP23470 1445 aa20.25■□□□□ 0.83
SEC22A-205ENST00000477063 CDK11AQ9UQ88 783 aaPredicted RBP20.24■□□□□ 0.83
SEC22A-205ENST00000477063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.83
SEC22A-205ENST00000477063 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
SEC22A-205ENST00000477063 PLB1Q6P1J6 1458 aa20.21■□□□□ 0.83
SEC22A-205ENST00000477063 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
SEC22A-205ENST00000477063 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
SEC22A-205ENST00000477063 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
SEC22A-205ENST00000477063 UACAQ9BZF9 1416 aa20.18■□□□□ 0.82
SEC22A-205ENST00000477063 CDK13Q14004 1512 aaKnown RBP20.17■□□□□ 0.82
SEC22A-205ENST00000477063 UHRF1BP1LA0JNW5 1464 aa20.17■□□□□ 0.82
SEC22A-205ENST00000477063 NCOA2Q15596 1464 aa20.16■□□□□ 0.82
SEC22A-205ENST00000477063 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
SEC22A-205ENST00000477063 MAGI3Q5TCQ9 1506 aa20.15■□□□□ 0.82
SEC22A-205ENST00000477063 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
SEC22A-205ENST00000477063 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
SEC22A-205ENST00000477063 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
SEC22A-205ENST00000477063 MYOM3Q5VTT5 1437 aa20.12■□□□□ 0.81
SEC22A-205ENST00000477063 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
SEC22A-205ENST00000477063 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
SEC22A-205ENST00000477063 ATP10BO94823 1461 aa20.1■□□□□ 0.81
SEC22A-205ENST00000477063 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
SEC22A-205ENST00000477063 ITSN2Q9NZM3 1697 aa20.05■□□□□ 0.8
SEC22A-205ENST00000477063 TCOF1Q13428 1488 aaKnown RBP20.05■□□□□ 0.8
SEC22A-205ENST00000477063 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
SEC22A-205ENST00000477063 KIF14Q15058 1648 aa20.03■□□□□ 0.8
SEC22A-205ENST00000477063 KDM5BQ9UGL1 1544 aa20.02■□□□□ 0.8
SEC22A-205ENST00000477063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
SEC22A-205ENST00000477063 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
SEC22A-205ENST00000477063 PTPN23Q9H3S7 1636 aa20.01■□□□□ 0.79
SEC22A-205ENST00000477063 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
SEC22A-205ENST00000477063 HRCP23327 699 aa19.97■□□□□ 0.79
SEC22A-205ENST00000477063 ZCCHC11Q5TAX3 1644 aaKnown RBP19.96■□□□□ 0.79
SEC22A-205ENST00000477063 ABCC10Q5T3U5 1492 aa19.94■□□□□ 0.78
SEC22A-205ENST00000477063 GPATCH8Q9UKJ3 1502 aaKnown RBP19.92■□□□□ 0.78
SEC22A-205ENST00000477063 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
SEC22A-205ENST00000477063 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
SEC22A-205ENST00000477063 CDC42BPAQ5VT25 1732 aa19.89■□□□□ 0.77
SEC22A-205ENST00000477063 AKNAQ7Z591 1439 aa19.89■□□□□ 0.77
SEC22A-205ENST00000477063 ACIN1Q9UKV3 1341 aaKnown RBP19.87■□□□□ 0.77
SEC22A-205ENST00000477063 DNMT1P26358 1616 aaKnown RBP19.85■□□□□ 0.77
SEC22A-205ENST00000477063 PREX2Q70Z35 1606 aa19.85■□□□□ 0.77
SEC22A-205ENST00000477063 SETD5Q9C0A6 1442 aa19.84■□□□□ 0.77
SEC22A-205ENST00000477063 CLSPNQ9HAW4 1339 aa19.83■□□□□ 0.77
SEC22A-205ENST00000477063 ARAP3Q8WWN8 1544 aa19.83■□□□□ 0.77
SEC22A-205ENST00000477063 CFDP1Q9UEE9 299 aaPredicted RBP19.82■□□□□ 0.76
SEC22A-205ENST00000477063 HFM1A2PYH4 1435 aa19.82■□□□□ 0.76
SEC22A-205ENST00000477063 MYO5CQ9NQX4 1742 aa19.82■□□□□ 0.76
SEC22A-205ENST00000477063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
SEC22A-205ENST00000477063 CAMSAP2Q08AD1 1489 aa19.81■□□□□ 0.76
SEC22A-205ENST00000477063 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms