RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 PRG4Q92954 1404 aaPredicted RBP30.89■■■□□ 2.53
ABCB1-204ENST00000476862 CARMIL1Q5VZK9 1371 aa30.81■■■□□ 2.52
ABCB1-204ENST00000476862 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
ABCB1-204ENST00000476862 KIAA0586Q9BVV6 1533 aa30.76■■■□□ 2.51
ABCB1-204ENST00000476862 NPM1P06748 294 aaKnown RBP eCLIP30.67■■■□□ 2.5
ABCB1-204ENST00000476862 CARMIL2Q6F5E8 1435 aa30.56■■■□□ 2.48
ABCB1-204ENST00000476862 RAPGEF2Q9Y4G8 1499 aa30.56■■■□□ 2.48
ABCB1-204ENST00000476862 TTBK1Q5TCY1 1321 aaPredicted RBP30.53■■■□□ 2.48
ABCB1-204ENST00000476862 IQGAP2Q13576 1575 aa30.52■■■□□ 2.48
ABCB1-204ENST00000476862 PTPRGP23470 1445 aa30.48■■■□□ 2.47
ABCB1-204ENST00000476862 TNIKQ9UKE5 1360 aa30.44■■■□□ 2.46
ABCB1-204ENST00000476862 ADCY10Q96PN6 1610 aa30.4■■■□□ 2.46
ABCB1-204ENST00000476862 FAM69CQ0P6D2 419 aa30.37■■■□□ 2.45
ABCB1-204ENST00000476862 KIF13AQ9H1H9 1805 aa30.34■■■□□ 2.45
ABCB1-204ENST00000476862 MAPKBP1O60336 1514 aa30.33■■■□□ 2.45
ABCB1-204ENST00000476862 UGGT2Q9NYU1 1516 aa30.29■■■□□ 2.44
ABCB1-204ENST00000476862 ABCC10Q5T3U5 1492 aa30.29■■■□□ 2.44
ABCB1-204ENST00000476862 CTTNBP2Q8WZ74 1663 aa30.29■■■□□ 2.44
ABCB1-204ENST00000476862 DISP1Q96F81 1524 aa30.27■■■□□ 2.44
ABCB1-204ENST00000476862 PRXQ9BXM0 1461 aa30.23■■■□□ 2.43
ABCB1-204ENST00000476862 UACAQ9BZF9 1416 aa30.22■■■□□ 2.43
ABCB1-204ENST00000476862 FAM9AQ8IZU1 332 aaPredicted RBP30.22■■■□□ 2.43
ABCB1-204ENST00000476862 CSRNP3Q8WYN3 585 aa30.22■■■□□ 2.43
ABCB1-204ENST00000476862 ABCC2Q92887 1545 aa30.21■■■□□ 2.43
ABCB1-204ENST00000476862 KIAA0556O60303 1618 aa30.2■■■□□ 2.43
ABCB1-204ENST00000476862 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
ABCB1-204ENST00000476862 DIP2BQ9P265 1576 aa30.19■■■□□ 2.42
ABCB1-204ENST00000476862 UHRF1BP1LA0JNW5 1464 aa30.18■■■□□ 2.42
ABCB1-204ENST00000476862 EEA1Q15075 1411 aa30.13■■■□□ 2.41
ABCB1-204ENST00000476862 PLB1Q6P1J6 1458 aa30.12■■■□□ 2.41
ABCB1-204ENST00000476862 TSPOAP1O95153 1857 aa30.1■■■□□ 2.41
ABCB1-204ENST00000476862 ASXL2Q76L83 1435 aa30.09■■■□□ 2.41
ABCB1-204ENST00000476862 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
ABCB1-204ENST00000476862 KDM5BQ9UGL1 1544 aa30.02■■■□□ 2.4
ABCB1-204ENST00000476862 ZCCHC11Q5TAX3 1644 aaKnown RBP29.99■■■□□ 2.39
ABCB1-204ENST00000476862 P3H3Q8IVL6 736 aa29.98■■■□□ 2.39
ABCB1-204ENST00000476862 GLI2P10070 1586 aa29.94■■■□□ 2.38
ABCB1-204ENST00000476862 KDM6BO15054 1643 aa29.93■■■□□ 2.38
ABCB1-204ENST00000476862 RANGAP1P46060 587 aaPredicted RBP29.91■■■□□ 2.38
ABCB1-204ENST00000476862 EPRSP07814 1512 aaKnown RBP29.88■■■□□ 2.37
ABCB1-204ENST00000476862 ABCA8O94911 1581 aa29.88■■■□□ 2.37
ABCB1-204ENST00000476862 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
ABCB1-204ENST00000476862 WDR7Q9Y4E6 1490 aa29.85■■■□□ 2.37
ABCB1-204ENST00000476862 KCNH8Q96L42 1107 aa29.83■■■□□ 2.37
ABCB1-204ENST00000476862 TEX14Q8IWB6 1497 aa29.8■■■□□ 2.36
ABCB1-204ENST00000476862 ARID3CA6NKF2 412 aa29.79■■■□□ 2.36
ABCB1-204ENST00000476862 KIF21BO75037 1637 aa29.78■■■□□ 2.36
ABCB1-204ENST00000476862 SAMD9Q5K651 1589 aa29.78■■■□□ 2.36
ABCB1-204ENST00000476862 MAP3K4Q9Y6R4 1608 aa29.77■■■□□ 2.36
ABCB1-204ENST00000476862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.76■■■□□ 2.35
ABCB1-204ENST00000476862 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
ABCB1-204ENST00000476862 HNRNPUL2Q1KMD3 747 aaKnown RBP29.76■■■□□ 2.35
ABCB1-204ENST00000476862 EHMT2Q96KQ7 1210 aa29.75■■■□□ 2.35
ABCB1-204ENST00000476862 PPRC1Q5VV67 1664 aaKnown RBP29.75■■■□□ 2.35
ABCB1-204ENST00000476862 RAPGEF6Q8TEU7 1601 aa29.69■■■□□ 2.34
ABCB1-204ENST00000476862 CD109Q6YHK3 1445 aa29.69■■■□□ 2.34
ABCB1-204ENST00000476862 ATP10BO94823 1461 aa29.68■■■□□ 2.34
ABCB1-204ENST00000476862 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
ABCB1-204ENST00000476862 FHOD3Q2V2M9 1422 aa29.66■■■□□ 2.34
ABCB1-204ENST00000476862 EFCAB5A4FU69 1503 aa29.63■■■□□ 2.33
ABCB1-204ENST00000476862 MAGI3Q5TCQ9 1506 aa29.58■■■□□ 2.33
ABCB1-204ENST00000476862 PLEKHD1A6NEE1 506 aa29.54■■■□□ 2.32
ABCB1-204ENST00000476862 COL17A1Q9UMD9 1497 aaPredicted RBP29.52■■■□□ 2.32
ABCB1-204ENST00000476862 NUP153P49790 1475 aaKnown RBP29.51■■■□□ 2.31
ABCB1-204ENST00000476862 ATP1B4Q9UN42 357 aaPredicted RBP29.49■■■□□ 2.31
ABCB1-204ENST00000476862 ABCA9Q8IUA7 1624 aa29.45■■■□□ 2.3
ABCB1-204ENST00000476862 KDM4FA0A1W2PPD8 638 aa29.44■■■□□ 2.3
ABCB1-204ENST00000476862 FMN1Q68DA7 1419 aa29.42■■■□□ 2.3
ABCB1-204ENST00000476862 PHLDB1Q86UU1 1377 aa29.41■■■□□ 2.3
ABCB1-204ENST00000476862 ARHGAP35Q9NRY4 1499 aa29.36■■■□□ 2.29
ABCB1-204ENST00000476862 CDK11AQ9UQ88 783 aaPredicted RBP29.34■■■□□ 2.29
ABCB1-204ENST00000476862 ARAP3Q8WWN8 1544 aa29.34■■■□□ 2.29
ABCB1-204ENST00000476862 HECW1Q76N89 1606 aa29.31■■■□□ 2.28
ABCB1-204ENST00000476862 NEO1Q92859 1461 aa29.31■■■□□ 2.28
ABCB1-204ENST00000476862 ADGRL1O94910 1474 aa29.3■■■□□ 2.28
ABCB1-204ENST00000476862 CDK13Q14004 1512 aaKnown RBP29.29■■■□□ 2.28
ABCB1-204ENST00000476862 RAPGEF3O95398 923 aa29.24■■■□□ 2.27
ABCB1-204ENST00000476862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.21■■■□□ 2.27
ABCB1-204ENST00000476862 CFAP74Q9C0B2 1584 aa29.21■■■□□ 2.27
ABCB1-204ENST00000476862 FANCAO15360 1455 aa29.17■■■□□ 2.26
ABCB1-204ENST00000476862 AKNAQ7Z591 1439 aa29.17■■■□□ 2.26
ABCB1-204ENST00000476862 TTC37Q6PGP7 1564 aa29.14■■■□□ 2.26
ABCB1-204ENST00000476862 CLIP1P30622 1438 aa29.14■■■□□ 2.26
ABCB1-204ENST00000476862 DENND4BO75064 1496 aaPredicted RBP29.14■■■□□ 2.26
ABCB1-204ENST00000476862 ARID4BQ4LE39 1312 aaPredicted RBP29.09■■■□□ 2.25
ABCB1-204ENST00000476862 EFCAB2Q5VUJ9 269 aa29.08■■■□□ 2.25
ABCB1-204ENST00000476862 PLCH2O75038 1416 aa29.08■■■□□ 2.25
ABCB1-204ENST00000476862 TROQ12816 1431 aaPredicted RBP29.08■■■□□ 2.25
ABCB1-204ENST00000476862 KIF14Q15058 1648 aa29.07■■■□□ 2.24
ABCB1-204ENST00000476862 CASKIN1Q8WXD9 1431 aa29.07■■■□□ 2.24
ABCB1-204ENST00000476862 CCDC18Q5T9S5 1454 aa29.06■■■□□ 2.24
ABCB1-204ENST00000476862 MYO5CQ9NQX4 1742 aa29.06■■■□□ 2.24
ABCB1-204ENST00000476862 PCF11O94913 1555 aaKnown RBP29.02■■■□□ 2.24
ABCB1-204ENST00000476862 FRMPD1Q5SYB0 1578 aa29.02■■■□□ 2.24
ABCB1-204ENST00000476862 RICTORQ6R327 1708 aa29.02■■■□□ 2.24
ABCB1-204ENST00000476862 LRRIQ1Q96JM4 1722 aa29■■■□□ 2.23
ABCB1-204ENST00000476862 SCAPERQ9BY12 1400 aa29■■■□□ 2.23
ABCB1-204ENST00000476862 FYCO1Q9BQS8 1478 aa28.97■■■□□ 2.23
ABCB1-204ENST00000476862 ARHGAP5Q13017 1502 aa28.95■■■□□ 2.23
ABCB1-204ENST00000476862 MYT1LQ9UL68 1186 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms