RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 PRG4Q92954 1404 aaPredicted RBP24.32■■□□□ 1.48
SLC6A8-209ENST00000476466 JPH4Q96JJ6 628 aa24.29■■□□□ 1.48
SLC6A8-209ENST00000476466 KIAA0586Q9BVV6 1533 aa24.27■■□□□ 1.48
SLC6A8-209ENST00000476466 TRHP20396 242 aaPredicted RBP24.16■■□□□ 1.46
SLC6A8-209ENST00000476466 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
SLC6A8-209ENST00000476466 IQGAP2Q13576 1575 aa24.12■■□□□ 1.45
SLC6A8-209ENST00000476466 ADCY10Q96PN6 1610 aa24.06■■□□□ 1.44
SLC6A8-209ENST00000476466 PRXQ9BXM0 1461 aa24.06■■□□□ 1.44
SLC6A8-209ENST00000476466 DISP1Q96F81 1524 aa24.04■■□□□ 1.44
SLC6A8-209ENST00000476466 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
SLC6A8-209ENST00000476466 CTTNBP2Q8WZ74 1663 aa23.97■■□□□ 1.43
SLC6A8-209ENST00000476466 PTPRGP23470 1445 aa23.95■■□□□ 1.42
SLC6A8-209ENST00000476466 CARMIL2Q6F5E8 1435 aa23.94■■□□□ 1.42
SLC6A8-209ENST00000476466 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
SLC6A8-209ENST00000476466 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
SLC6A8-209ENST00000476466 KIF13AQ9H1H9 1805 aa23.93■■□□□ 1.42
SLC6A8-209ENST00000476466 TTBK1Q5TCY1 1321 aaPredicted RBP23.92■■□□□ 1.42
SLC6A8-209ENST00000476466 MAPKBP1O60336 1514 aa23.9■■□□□ 1.42
SLC6A8-209ENST00000476466 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
SLC6A8-209ENST00000476466 DIP2BQ9P265 1576 aa23.83■■□□□ 1.41
SLC6A8-209ENST00000476466 ABCC10Q5T3U5 1492 aa23.83■■□□□ 1.41
SLC6A8-209ENST00000476466 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
SLC6A8-209ENST00000476466 ABCC2Q92887 1545 aa23.82■■□□□ 1.4
SLC6A8-209ENST00000476466 EEA1Q15075 1411 aa23.81■■□□□ 1.4
SLC6A8-209ENST00000476466 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
SLC6A8-209ENST00000476466 UACAQ9BZF9 1416 aa23.8■■□□□ 1.4
SLC6A8-209ENST00000476466 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
SLC6A8-209ENST00000476466 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
SLC6A8-209ENST00000476466 PLB1Q6P1J6 1458 aa23.75■■□□□ 1.39
SLC6A8-209ENST00000476466 FAM69CQ0P6D2 419 aa23.73■■□□□ 1.39
SLC6A8-209ENST00000476466 GOLGA3Q08378 1498 aa23.73■■□□□ 1.39
SLC6A8-209ENST00000476466 KDM5BQ9UGL1 1544 aa23.73■■□□□ 1.39
SLC6A8-209ENST00000476466 ASXL2Q76L83 1435 aa23.71■■□□□ 1.39
SLC6A8-209ENST00000476466 KIF21BO75037 1637 aa23.7■■□□□ 1.38
SLC6A8-209ENST00000476466 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.38
SLC6A8-209ENST00000476466 ABCA8O94911 1581 aa23.69■■□□□ 1.38
SLC6A8-209ENST00000476466 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
SLC6A8-209ENST00000476466 P3H3Q8IVL6 736 aa23.63■■□□□ 1.37
SLC6A8-209ENST00000476466 TSPOAP1O95153 1857 aa23.6■■□□□ 1.37
SLC6A8-209ENST00000476466 PPRC1Q5VV67 1664 aaKnown RBP23.58■■□□□ 1.37
SLC6A8-209ENST00000476466 GLI2P10070 1586 aa23.58■■□□□ 1.37
SLC6A8-209ENST00000476466 EPRSP07814 1512 aaKnown RBP23.58■■□□□ 1.36
SLC6A8-209ENST00000476466 FHOD3Q2V2M9 1422 aa23.54■■□□□ 1.36
SLC6A8-209ENST00000476466 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
SLC6A8-209ENST00000476466 WDR7Q9Y4E6 1490 aa23.54■■□□□ 1.36
SLC6A8-209ENST00000476466 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
SLC6A8-209ENST00000476466 MAP3K4Q9Y6R4 1608 aa23.51■■□□□ 1.35
SLC6A8-209ENST00000476466 ARID3CA6NKF2 412 aa23.49■■□□□ 1.35
SLC6A8-209ENST00000476466 ATP10BO94823 1461 aa23.48■■□□□ 1.35
SLC6A8-209ENST00000476466 RAPGEF6Q8TEU7 1601 aa23.48■■□□□ 1.35
SLC6A8-209ENST00000476466 KDM6BO15054 1643 aa23.47■■□□□ 1.35
SLC6A8-209ENST00000476466 EFCAB5A4FU69 1503 aa23.44■■□□□ 1.34
SLC6A8-209ENST00000476466 NUP153P49790 1475 aaKnown RBP23.44■■□□□ 1.34
SLC6A8-209ENST00000476466 COL17A1Q9UMD9 1497 aaPredicted RBP23.39■■□□□ 1.34
SLC6A8-209ENST00000476466 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
SLC6A8-209ENST00000476466 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
SLC6A8-209ENST00000476466 KCNH8Q96L42 1107 aa23.35■■□□□ 1.33
SLC6A8-209ENST00000476466 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
SLC6A8-209ENST00000476466 CD109Q6YHK3 1445 aa23.31■■□□□ 1.32
SLC6A8-209ENST00000476466 TEX14Q8IWB6 1497 aa23.3■■□□□ 1.32
SLC6A8-209ENST00000476466 MAGI3Q5TCQ9 1506 aa23.3■■□□□ 1.32
SLC6A8-209ENST00000476466 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
SLC6A8-209ENST00000476466 ABCA9Q8IUA7 1624 aa23.27■■□□□ 1.32
SLC6A8-209ENST00000476466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.2■■□□□ 1.3
SLC6A8-209ENST00000476466 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
SLC6A8-209ENST00000476466 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
SLC6A8-209ENST00000476466 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
SLC6A8-209ENST00000476466 HECW1Q76N89 1606 aa23.17■■□□□ 1.3
SLC6A8-209ENST00000476466 TTC37Q6PGP7 1564 aa23.15■■□□□ 1.3
SLC6A8-209ENST00000476466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.14■■□□□ 1.32e-13■■■□□ 15.1
SLC6A8-209ENST00000476466 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
SLC6A8-209ENST00000476466 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
SLC6A8-209ENST00000476466 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
SLC6A8-209ENST00000476466 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
SLC6A8-209ENST00000476466 PLEKHD1A6NEE1 506 aa23.09■■□□□ 1.29
SLC6A8-209ENST00000476466 CLIP1P30622 1438 aa23.08■■□□□ 1.28
SLC6A8-209ENST00000476466 FRMPD1Q5SYB0 1578 aa23.07■■□□□ 1.28
SLC6A8-209ENST00000476466 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
SLC6A8-209ENST00000476466 NEO1Q92859 1461 aa23.06■■□□□ 1.28
SLC6A8-209ENST00000476466 KIF14Q15058 1648 aa23.06■■□□□ 1.28
SLC6A8-209ENST00000476466 CASKIN1Q8WXD9 1431 aa23.04■■□□□ 1.28
SLC6A8-209ENST00000476466 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
SLC6A8-209ENST00000476466 FANCAO15360 1455 aa22.99■■□□□ 1.27
SLC6A8-209ENST00000476466 RAPGEF3O95398 923 aa22.99■■□□□ 1.27
SLC6A8-209ENST00000476466 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
SLC6A8-209ENST00000476466 PHLDB1Q86UU1 1377 aa22.98■■□□□ 1.27
SLC6A8-209ENST00000476466 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
SLC6A8-209ENST00000476466 RICTORQ6R327 1708 aa22.95■■□□□ 1.26
SLC6A8-209ENST00000476466 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
SLC6A8-209ENST00000476466 CCDC18Q5T9S5 1454 aa22.94■■□□□ 1.26
SLC6A8-209ENST00000476466 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
SLC6A8-209ENST00000476466 PLCH2O75038 1416 aa22.93■■□□□ 1.26
SLC6A8-209ENST00000476466 CEP162Q5TB80 1403 aa22.93■■□□□ 1.26
SLC6A8-209ENST00000476466 MYO5CQ9NQX4 1742 aa22.91■■□□□ 1.26
SLC6A8-209ENST00000476466 DENND4BO75064 1496 aaPredicted RBP22.9■■□□□ 1.26
SLC6A8-209ENST00000476466 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
SLC6A8-209ENST00000476466 CDK11AQ9UQ88 783 aaPredicted RBP22.87■■□□□ 1.25
SLC6A8-209ENST00000476466 ARHGEF40Q8TER5 1519 aa22.87■■□□□ 1.25
SLC6A8-209ENST00000476466 ZMYM4Q5VZL5 1548 aa22.86■■□□□ 1.25
SLC6A8-209ENST00000476466 POGZQ7Z3K3 1410 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms