RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
VSTM4-203ENST00000476018 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
VSTM4-203ENST00000476018 NUP160Q12769 1436 aa22.9■■□□□ 1.26
VSTM4-203ENST00000476018 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
VSTM4-203ENST00000476018 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
VSTM4-203ENST00000476018 ERCC6L2Q5T890 1561 aa22.78■■□□□ 1.24
VSTM4-203ENST00000476018 PRG4Q92954 1404 aaPredicted RBP22.65■■□□□ 1.22
VSTM4-203ENST00000476018 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.21
VSTM4-203ENST00000476018 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
VSTM4-203ENST00000476018 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
VSTM4-203ENST00000476018 POTEDQ86YR6 584 aa22.59■■□□□ 1.21
VSTM4-203ENST00000476018 CUL7Q14999 1698 aa22.58■■□□□ 1.21
VSTM4-203ENST00000476018 IGF1RP08069 1367 aa22.55■■□□□ 1.2
VSTM4-203ENST00000476018 KIAA0586Q9BVV6 1533 aa22.53■■□□□ 1.2
VSTM4-203ENST00000476018 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
VSTM4-203ENST00000476018 KIF13AQ9H1H9 1805 aa22.45■■□□□ 1.18
VSTM4-203ENST00000476018 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
VSTM4-203ENST00000476018 MAPKBP1O60336 1514 aa22.42■■□□□ 1.18
VSTM4-203ENST00000476018 ADCY10Q96PN6 1610 aa22.4■■□□□ 1.18
VSTM4-203ENST00000476018 ABCC10Q5T3U5 1492 aa22.39■■□□□ 1.17
VSTM4-203ENST00000476018 CARMIL2Q6F5E8 1435 aa22.34■■□□□ 1.17
VSTM4-203ENST00000476018 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
VSTM4-203ENST00000476018 IQGAP2Q13576 1575 aa22.32■■□□□ 1.16
VSTM4-203ENST00000476018 DIP2BQ9P265 1576 aa22.32■■□□□ 1.16
VSTM4-203ENST00000476018 PTPRGP23470 1445 aa22.31■■□□□ 1.16
VSTM4-203ENST00000476018 TNIKQ9UKE5 1360 aa22.28■■□□□ 1.16
VSTM4-203ENST00000476018 RAPGEF2Q9Y4G8 1499 aa22.24■■□□□ 1.15
VSTM4-203ENST00000476018 ABCC2Q92887 1545 aa22.21■■□□□ 1.15
VSTM4-203ENST00000476018 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
VSTM4-203ENST00000476018 UHRF1BP1LA0JNW5 1464 aa22.18■■□□□ 1.14
VSTM4-203ENST00000476018 DISP1Q96F81 1524 aa22.17■■□□□ 1.14
VSTM4-203ENST00000476018 UGGT2Q9NYU1 1516 aa22.17■■□□□ 1.14
VSTM4-203ENST00000476018 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
VSTM4-203ENST00000476018 KDM6BO15054 1643 aa22.15■■□□□ 1.14
VSTM4-203ENST00000476018 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
VSTM4-203ENST00000476018 TSPOAP1O95153 1857 aa22.13■■□□□ 1.13
VSTM4-203ENST00000476018 ASXL2Q76L83 1435 aa22.13■■□□□ 1.13
VSTM4-203ENST00000476018 KIAA0556O60303 1618 aa22.1■■□□□ 1.13
VSTM4-203ENST00000476018 GLI2P10070 1586 aa22.09■■□□□ 1.13
VSTM4-203ENST00000476018 CTTNBP2Q8WZ74 1663 aa22.07■■□□□ 1.12
VSTM4-203ENST00000476018 KDM5BQ9UGL1 1544 aa22.06■■□□□ 1.12
VSTM4-203ENST00000476018 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
VSTM4-203ENST00000476018 ZCCHC11Q5TAX3 1644 aaKnown RBP22.01■■□□□ 1.11
VSTM4-203ENST00000476018 EPRSP07814 1512 aaKnown RBP21.99■■□□□ 1.11
VSTM4-203ENST00000476018 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
VSTM4-203ENST00000476018 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
VSTM4-203ENST00000476018 TEX14Q8IWB6 1497 aa21.95■■□□□ 1.1
VSTM4-203ENST00000476018 MAP3K4Q9Y6R4 1608 aa21.95■■□□□ 1.1
VSTM4-203ENST00000476018 WDR7Q9Y4E6 1490 aa21.93■■□□□ 1.1
VSTM4-203ENST00000476018 ABCA8O94911 1581 aa21.89■■□□□ 1.09
VSTM4-203ENST00000476018 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
VSTM4-203ENST00000476018 KDM4FA0A1W2PPD8 638 aa21.86■■□□□ 1.09
VSTM4-203ENST00000476018 CFAP43Q8NDM7 1665 aa21.81■■□□□ 1.08
VSTM4-203ENST00000476018 COL17A1Q9UMD9 1497 aaPredicted RBP21.8■■□□□ 1.08
VSTM4-203ENST00000476018 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
VSTM4-203ENST00000476018 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
VSTM4-203ENST00000476018 EEA1Q15075 1411 aa21.78■■□□□ 1.08
VSTM4-203ENST00000476018 CD109Q6YHK3 1445 aa21.78■■□□□ 1.08
VSTM4-203ENST00000476018 KCNH8Q96L42 1107 aa21.75■■□□□ 1.07
VSTM4-203ENST00000476018 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
VSTM4-203ENST00000476018 ADGRL1O94910 1474 aa21.74■■□□□ 1.07
VSTM4-203ENST00000476018 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
VSTM4-203ENST00000476018 ATP10BO94823 1461 aa21.69■■□□□ 1.06
VSTM4-203ENST00000476018 RAPGEF6Q8TEU7 1601 aa21.66■■□□□ 1.06
VSTM4-203ENST00000476018 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
VSTM4-203ENST00000476018 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
VSTM4-203ENST00000476018 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
VSTM4-203ENST00000476018 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
VSTM4-203ENST00000476018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
VSTM4-203ENST00000476018 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.05
VSTM4-203ENST00000476018 KIF21BO75037 1637 aa21.58■■□□□ 1.04
VSTM4-203ENST00000476018 NUP153P49790 1475 aaKnown RBP21.57■■□□□ 1.04
VSTM4-203ENST00000476018 FHOD3Q2V2M9 1422 aa21.56■■□□□ 1.04
VSTM4-203ENST00000476018 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
VSTM4-203ENST00000476018 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
VSTM4-203ENST00000476018 NEO1Q92859 1461 aa21.53■■□□□ 1.04
VSTM4-203ENST00000476018 MAPK8IP2Q13387 824 aaPredicted RBP21.51■■□□□ 1.03
VSTM4-203ENST00000476018 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
VSTM4-203ENST00000476018 HECW2Q9P2P5 1572 aa21.44■■□□□ 1.02
VSTM4-203ENST00000476018 RAPGEF3O95398 923 aa21.42■■□□□ 1.02
VSTM4-203ENST00000476018 CFAP74Q9C0B2 1584 aa21.41■■□□□ 1.02
VSTM4-203ENST00000476018 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
VSTM4-203ENST00000476018 FRMPD1Q5SYB0 1578 aa21.39■■□□□ 1.01
VSTM4-203ENST00000476018 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
VSTM4-203ENST00000476018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.38■■□□□ 1.01
VSTM4-203ENST00000476018 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
VSTM4-203ENST00000476018 FANCAO15360 1455 aa21.37■■□□□ 1.01
VSTM4-203ENST00000476018 DENND4BO75064 1496 aaPredicted RBP21.37■■□□□ 1.01
VSTM4-203ENST00000476018 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
VSTM4-203ENST00000476018 TTC37Q6PGP7 1564 aa21.35■■□□□ 1.01
VSTM4-203ENST00000476018 CDK13Q14004 1512 aaKnown RBP21.34■■□□□ 1.01
VSTM4-203ENST00000476018 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
VSTM4-203ENST00000476018 ADAMTSL3P82987 1691 aa21.34■■□□□ 1.01
VSTM4-203ENST00000476018 HECW1Q76N89 1606 aa21.33■■□□□ 1.01
VSTM4-203ENST00000476018 RICTORQ6R327 1708 aa21.32■■□□□ 1
VSTM4-203ENST00000476018 ARID4BQ4LE39 1312 aaPredicted RBP21.3■■□□□ 1
VSTM4-203ENST00000476018 BCORL1Q5H9F3 1711 aa21.3■■□□□ 1
VSTM4-203ENST00000476018 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
VSTM4-203ENST00000476018 PTPRMP28827 1452 aa21.3■■□□□ 1
VSTM4-203ENST00000476018 ARHGAP35Q9NRY4 1499 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms