RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 ABCC10Q5T3U5 1492 aa32.48■■■□□ 2.79
RNF220-212ENST00000475378 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.79
RNF220-212ENST00000475378 MAPKBP1O60336 1514 aa32.44■■■□□ 2.78
RNF220-212ENST00000475378 DIP2BQ9P265 1576 aa32.41■■■□□ 2.78
RNF220-212ENST00000475378 FAM69CQ0P6D2 419 aa32.4■■■□□ 2.78
RNF220-212ENST00000475378 ADCY10Q96PN6 1610 aa32.39■■■□□ 2.78
RNF220-212ENST00000475378 NPM1P06748 294 aaKnown RBP eCLIP32.3■■■□□ 2.76
RNF220-212ENST00000475378 KDM6BO15054 1643 aa32.26■■■□□ 2.76
RNF220-212ENST00000475378 TSPOAP1O95153 1857 aa32.23■■■□□ 2.75
RNF220-212ENST00000475378 KIAA0586Q9BVV6 1533 aa32.21■■■□□ 2.75
RNF220-212ENST00000475378 KDM4FA0A1W2PPD8 638 aa32.2■■■□□ 2.75
RNF220-212ENST00000475378 CUL7Q14999 1698 aa32.1■■■□□ 2.73
RNF220-212ENST00000475378 IGF1RP08069 1367 aa32.09■■■□□ 2.73
RNF220-212ENST00000475378 PTPRGP23470 1445 aa31.99■■■□□ 2.71
RNF220-212ENST00000475378 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
RNF220-212ENST00000475378 PPRC1Q5VV67 1664 aaKnown RBP31.99■■■□□ 2.71
RNF220-212ENST00000475378 ABCC2Q92887 1545 aa31.95■■■□□ 2.7
RNF220-212ENST00000475378 GLI2P10070 1586 aa31.93■■■□□ 2.7
RNF220-212ENST00000475378 TNIKQ9UKE5 1360 aa31.89■■■□□ 2.7
RNF220-212ENST00000475378 ASXL2Q76L83 1435 aa31.88■■■□□ 2.69
RNF220-212ENST00000475378 PLB1Q6P1J6 1458 aa31.86■■■□□ 2.69
RNF220-212ENST00000475378 CARMIL2Q6F5E8 1435 aa31.85■■■□□ 2.69
RNF220-212ENST00000475378 CARMIL1Q5VZK9 1371 aa31.84■■■□□ 2.69
RNF220-212ENST00000475378 UHRF1BP1LA0JNW5 1464 aa31.84■■■□□ 2.69
RNF220-212ENST00000475378 ILDR1Q86SU0 546 aaPredicted RBP31.82■■■□□ 2.68
RNF220-212ENST00000475378 IQGAP2Q13576 1575 aa31.81■■■□□ 2.68
RNF220-212ENST00000475378 TTBK1Q5TCY1 1321 aaPredicted RBP31.81■■■□□ 2.68
RNF220-212ENST00000475378 ADGRL1O94910 1474 aa31.79■■■□□ 2.68
RNF220-212ENST00000475378 COL17A1Q9UMD9 1497 aaPredicted RBP31.76■■■□□ 2.67
RNF220-212ENST00000475378 MAP3K4Q9Y6R4 1608 aa31.75■■■□□ 2.67
RNF220-212ENST00000475378 UACAQ9BZF9 1416 aa31.75■■■□□ 2.67
RNF220-212ENST00000475378 DISP1Q96F81 1524 aa31.73■■■□□ 2.67
RNF220-212ENST00000475378 EPRSP07814 1512 aaKnown RBP31.7■■■□□ 2.67
RNF220-212ENST00000475378 KDM5BQ9UGL1 1544 aa31.7■■■□□ 2.67
RNF220-212ENST00000475378 ZCCHC11Q5TAX3 1644 aaKnown RBP31.65■■■□□ 2.66
RNF220-212ENST00000475378 TEX14Q8IWB6 1497 aa31.62■■■□□ 2.65
RNF220-212ENST00000475378 UGGT2Q9NYU1 1516 aa31.61■■■□□ 2.65
RNF220-212ENST00000475378 HECW2Q9P2P5 1572 aa31.59■■■□□ 2.65
RNF220-212ENST00000475378 KIAA0556O60303 1618 aa31.56■■■□□ 2.64
RNF220-212ENST00000475378 RAPGEF2Q9Y4G8 1499 aa31.49■■■□□ 2.63
RNF220-212ENST00000475378 WDR7Q9Y4E6 1490 aa31.47■■■□□ 2.63
RNF220-212ENST00000475378 CFAP43Q8NDM7 1665 aa31.4■■■□□ 2.62
RNF220-212ENST00000475378 MAGI3Q5TCQ9 1506 aa31.38■■■□□ 2.61
RNF220-212ENST00000475378 CTTNBP2Q8WZ74 1663 aa31.36■■■□□ 2.61
RNF220-212ENST00000475378 ABCA8O94911 1581 aa31.33■■■□□ 2.61
RNF220-212ENST00000475378 CD109Q6YHK3 1445 aa31.32■■■□□ 2.61
RNF220-212ENST00000475378 KIF21BO75037 1637 aa31.26■■■□□ 2.59
RNF220-212ENST00000475378 GOLGA3Q08378 1498 aa31.23■■■□□ 2.59
RNF220-212ENST00000475378 KCNH8Q96L42 1107 aa31.21■■■□□ 2.59
RNF220-212ENST00000475378 ARAP3Q8WWN8 1544 aa31.16■■■□□ 2.58
RNF220-212ENST00000475378 ADAMTSL3P82987 1691 aa31.07■■■□□ 2.56
RNF220-212ENST00000475378 PRXQ9BXM0 1461 aa31.05■■■□□ 2.56
RNF220-212ENST00000475378 ABCA9Q8IUA7 1624 aa31.04■■■□□ 2.56
RNF220-212ENST00000475378 ATP10BO94823 1461 aa31.02■■■□□ 2.56
RNF220-212ENST00000475378 FBXO41Q8TF61 875 aa31.02■■■□□ 2.56
RNF220-212ENST00000475378 PTPRMP28827 1452 aa31.01■■■□□ 2.55
RNF220-212ENST00000475378 PHLDB1Q86UU1 1377 aa30.97■■■□□ 2.55
RNF220-212ENST00000475378 BCORL1Q5H9F3 1711 aa30.93■■■□□ 2.54
RNF220-212ENST00000475378 ARID3CA6NKF2 412 aa30.93■■■□□ 2.54
RNF220-212ENST00000475378 FRMPD1Q5SYB0 1578 aa30.91■■■□□ 2.54
RNF220-212ENST00000475378 NEO1Q92859 1461 aa30.89■■■□□ 2.54
RNF220-212ENST00000475378 RAPGEF3O95398 923 aa30.89■■■□□ 2.54
RNF220-212ENST00000475378 MADDQ8WXG6 1647 aa30.87■■■□□ 2.53
RNF220-212ENST00000475378 SAMD9Q5K651 1589 aa30.86■■■□□ 2.53
RNF220-212ENST00000475378 RAPGEF6Q8TEU7 1601 aa30.85■■■□□ 2.53
RNF220-212ENST00000475378 P3H3Q8IVL6 736 aa30.85■■■□□ 2.53
RNF220-212ENST00000475378 PCF11O94913 1555 aaKnown RBP30.84■■■□□ 2.53
RNF220-212ENST00000475378 FAM9AQ8IZU1 332 aaPredicted RBP30.81■■■□□ 2.52
RNF220-212ENST00000475378 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
RNF220-212ENST00000475378 ARHGEF40Q8TER5 1519 aa30.75■■■□□ 2.51
RNF220-212ENST00000475378 RIMS1Q86UR5 1692 aaKnown RBP30.74■■■□□ 2.51
RNF220-212ENST00000475378 RICTORQ6R327 1708 aa30.74■■■□□ 2.51
RNF220-212ENST00000475378 NUP153P49790 1475 aaKnown RBP30.72■■■□□ 2.51
RNF220-212ENST00000475378 ARID4BQ4LE39 1312 aaPredicted RBP30.71■■■□□ 2.51
RNF220-212ENST00000475378 DENND4BO75064 1496 aaPredicted RBP30.65■■■□□ 2.5
RNF220-212ENST00000475378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.65■■■□□ 2.5
RNF220-212ENST00000475378 HNRNPUL2Q1KMD3 747 aaKnown RBP30.65■■■□□ 2.5
RNF220-212ENST00000475378 SIGLEC1Q9BZZ2 1709 aa30.63■■■□□ 2.49
RNF220-212ENST00000475378 FHOD3Q2V2M9 1422 aa30.63■■■□□ 2.49
RNF220-212ENST00000475378 AKNAQ7Z591 1439 aa30.61■■■□□ 2.49
RNF220-212ENST00000475378 CFAP74Q9C0B2 1584 aa30.61■■■□□ 2.49
RNF220-212ENST00000475378 ZMYM4Q5VZL5 1548 aa30.59■■■□□ 2.49
RNF220-212ENST00000475378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.57■■■□□ 2.49
RNF220-212ENST00000475378 FANCAO15360 1455 aa30.57■■■□□ 2.48
RNF220-212ENST00000475378 CSRNP3Q8WYN3 585 aa30.56■■■□□ 2.48
RNF220-212ENST00000475378 HSPA2P54652 639 aa30.54■■■□□ 2.48
RNF220-212ENST00000475378 TTC37Q6PGP7 1564 aa30.54■■■□□ 2.48
RNF220-212ENST00000475378 PLEKHD1A6NEE1 506 aa30.52■■■□□ 2.48
RNF220-212ENST00000475378 POGZQ7Z3K3 1410 aa30.52■■■□□ 2.48
RNF220-212ENST00000475378 EFCAB5A4FU69 1503 aa30.52■■■□□ 2.48
RNF220-212ENST00000475378 ZFYVE16Q7Z3T8 1539 aa30.52■■■□□ 2.48
RNF220-212ENST00000475378 YEATS2Q9ULM3 1422 aa30.5■■■□□ 2.47
RNF220-212ENST00000475378 FER1L4A9Z1Z3 1794 aa30.49■■■□□ 2.47
RNF220-212ENST00000475378 MAGI2Q86UL8 1455 aa30.47■■■□□ 2.47
RNF220-212ENST00000475378 HECW1Q76N89 1606 aa30.46■■■□□ 2.47
RNF220-212ENST00000475378 PLPPR3Q6T4P5 718 aa30.42■■■□□ 2.46
RNF220-212ENST00000475378 RANGAP1P46060 587 aaPredicted RBP30.41■■■□□ 2.46
RNF220-212ENST00000475378 CERKQ8TCT0 537 aa30.41■■■□□ 2.46
RNF220-212ENST00000475378 ARHGEF12Q9NZN5 1544 aa30.36■■■□□ 2.45
RNF220-212ENST00000475378 CDK13Q14004 1512 aaKnown RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms