RNA–Protein interactions for RNA: ENST00000475087.5

COCH-205, Transcript of cochlin, humanhuman

TSL 1 (best) BASIC

Gene COCH, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-205ENST00000475087 CEP170Q5SW79 1584 aa34.09■■■■□ 3.05
COCH-205ENST00000475087 CTTNBP2Q8WZ74 1663 aa34.07■■■■□ 3.05
COCH-205ENST00000475087 KIAA0586Q9BVV6 1533 aa34.04■■■■□ 3.04
COCH-205ENST00000475087 IQGAP2Q13576 1575 aa33.96■■■■□ 3.03
COCH-205ENST00000475087 CEP162Q5TB80 1403 aa33.93■■■■□ 3.02
COCH-205ENST00000475087 OSCARQ8IYS5 282 aa33.91■■■■□ 3.02
COCH-205ENST00000475087 RANGAP1P46060 587 aaPredicted RBP33.89■■■■□ 3.02
COCH-205ENST00000475087 CLASP1Q7Z460 1538 aa33.86■■■■□ 3.01
COCH-205ENST00000475087 CLIP1P30622 1438 aa33.85■■■■□ 3.01
COCH-205ENST00000475087 JPH4Q96JJ6 628 aa33.82■■■■□ 3
COCH-205ENST00000475087 UGGT2Q9NYU1 1516 aa33.82■■■■□ 3
COCH-205ENST00000475087 ARHGAP35Q9NRY4 1499 aa33.76■■■□□ 2.99
COCH-205ENST00000475087 EFCAB5A4FU69 1503 aa33.74■■■□□ 2.99
COCH-205ENST00000475087 SHROOM2Q13796 1616 aa33.73■■■□□ 2.99
COCH-205ENST00000475087 SAMD9Q5K651 1589 aa33.72■■■□□ 2.99
COCH-205ENST00000475087 DISP1Q96F81 1524 aa33.68■■■□□ 2.98
COCH-205ENST00000475087 P3H3Q8IVL6 736 aa33.65■■■□□ 2.98
COCH-205ENST00000475087 PRG4Q92954 1404 aaPredicted RBP33.65■■■□□ 2.98
COCH-205ENST00000475087 CARMIL2Q6F5E8 1435 aa33.63■■■□□ 2.97
COCH-205ENST00000475087 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
COCH-205ENST00000475087 KIAA0556O60303 1618 aa33.62■■■□□ 2.97
COCH-205ENST00000475087 FHOD3Q2V2M9 1422 aa33.59■■■□□ 2.97
COCH-205ENST00000475087 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.95
COCH-205ENST00000475087 VPS8Q8N3P4 1428 aa33.46■■■□□ 2.95
COCH-205ENST00000475087 FMN1Q68DA7 1419 aa33.44■■■□□ 2.94
COCH-205ENST00000475087 PTPRGP23470 1445 aa33.37■■■□□ 2.93
COCH-205ENST00000475087 TTBK1Q5TCY1 1321 aaPredicted RBP33.37■■■□□ 2.93
COCH-205ENST00000475087 ARHGEF11O15085 1522 aa33.32■■■□□ 2.92
COCH-205ENST00000475087 CASKIN1Q8WXD9 1431 aa33.28■■■□□ 2.92
COCH-205ENST00000475087 PCF11O94913 1555 aaKnown RBP33.27■■■□□ 2.92
COCH-205ENST00000475087 FYCO1Q9BQS8 1478 aa33.24■■■□□ 2.91
COCH-205ENST00000475087 PLB1Q6P1J6 1458 aa33.24■■■□□ 2.91
COCH-205ENST00000475087 ABCA8O94911 1581 aa33.21■■■□□ 2.91
COCH-205ENST00000475087 RIMBP3CA6NJZ7 1639 aa33.21■■■□□ 2.91
COCH-205ENST00000475087 RIMBP3BA6NNM3 1639 aa33.21■■■□□ 2.91
COCH-205ENST00000475087 RIMBP3Q9UFD9 1639 aa33.21■■■□□ 2.91
COCH-205ENST00000475087 RAPGEF6Q8TEU7 1601 aa33.2■■■□□ 2.91
COCH-205ENST00000475087 ATP1B4Q9UN42 357 aaPredicted RBP33.18■■■□□ 2.9
COCH-205ENST00000475087 UACAQ9BZF9 1416 aa33.17■■■□□ 2.9
COCH-205ENST00000475087 HECW1Q76N89 1606 aa33.14■■■□□ 2.9
COCH-205ENST00000475087 NUP153P49790 1475 aaKnown RBP33.11■■■□□ 2.89
COCH-205ENST00000475087 ABCC2Q92887 1545 aa33.08■■■□□ 2.89
COCH-205ENST00000475087 UHRF1BP1LA0JNW5 1464 aa33.08■■■□□ 2.89
COCH-205ENST00000475087 APLP2Q06481 763 aa33.08■■■□□ 2.89
COCH-205ENST00000475087 EPRSP07814 1512 aaKnown RBP33.05■■■□□ 2.88
COCH-205ENST00000475087 LRRIQ1Q96JM4 1722 aa33.04■■■□□ 2.88
COCH-205ENST00000475087 MAP3K1Q13233 1512 aa33.04■■■□□ 2.88
COCH-205ENST00000475087 CCDC18Q5T9S5 1454 aa33.03■■■□□ 2.88
COCH-205ENST00000475087 CYB5RLQ6IPT4 315 aa33■■■□□ 2.87
COCH-205ENST00000475087 TIAM1Q13009 1591 aa33■■■□□ 2.87
COCH-205ENST00000475087 ARID3CA6NKF2 412 aa33■■■□□ 2.87
COCH-205ENST00000475087 ADCY10Q96PN6 1610 aa32.99■■■□□ 2.87
COCH-205ENST00000475087 DNAJC5Q9H3Z4 198 aa32.99■■■□□ 2.87
COCH-205ENST00000475087 CDK13Q14004 1512 aaKnown RBP32.98■■■□□ 2.87
COCH-205ENST00000475087 ATP10BO94823 1461 aa32.97■■■□□ 2.87
COCH-205ENST00000475087 CFAP43Q8NDM7 1665 aa32.96■■■□□ 2.87
COCH-205ENST00000475087 KDM5BQ9UGL1 1544 aa32.92■■■□□ 2.86
COCH-205ENST00000475087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.9■■■□□ 2.86
COCH-205ENST00000475087 HNRNPUL2Q1KMD3 747 aaKnown RBP32.9■■■□□ 2.86
COCH-205ENST00000475087 KANK4Q5T7N3 995 aaPredicted RBP32.9■■■□□ 2.86
COCH-205ENST00000475087 LRRC9Q6ZRR7 1453 aa32.87■■■□□ 2.85
COCH-205ENST00000475087 PPARGC1BQ86YN6 1023 aaKnown RBP32.87■■■□□ 2.85
COCH-205ENST00000475087 CDK11AQ9UQ88 783 aaPredicted RBP32.85■■■□□ 2.85
COCH-205ENST00000475087 ZCCHC11Q5TAX3 1644 aaKnown RBP32.84■■■□□ 2.85
COCH-205ENST00000475087 MAGI3Q5TCQ9 1506 aa32.81■■■□□ 2.84
COCH-205ENST00000475087 MTUS2Q5JR59 1369 aa32.8■■■□□ 2.84
COCH-205ENST00000475087 NPM1P06748 294 aaKnown RBP eCLIP32.79■■■□□ 2.84
COCH-205ENST00000475087 PLEKHD1A6NEE1 506 aa32.78■■■□□ 2.84
COCH-205ENST00000475087 EHBP1L1Q8N3D4 1523 aa32.76■■■□□ 2.83
COCH-205ENST00000475087 TROQ12816 1431 aaPredicted RBP32.73■■■□□ 2.83
COCH-205ENST00000475087 ASXL2Q76L83 1435 aa32.64■■■□□ 2.82
COCH-205ENST00000475087 SUPT6HQ7KZ85 1726 aaKnown RBP32.62■■■□□ 2.81
COCH-205ENST00000475087 WDR7Q9Y4E6 1490 aa32.62■■■□□ 2.81
COCH-205ENST00000475087 NCOA2Q15596 1464 aa32.6■■■□□ 2.81
COCH-205ENST00000475087 MAPKBP1O60336 1514 aa32.6■■■□□ 2.81
COCH-205ENST00000475087 KIF14Q15058 1648 aa32.56■■■□□ 2.8
COCH-205ENST00000475087 KCNH8Q96L42 1107 aa32.54■■■□□ 2.8
COCH-205ENST00000475087 PHLDB1Q86UU1 1377 aa32.52■■■□□ 2.8
COCH-205ENST00000475087 ABCC10Q5T3U5 1492 aa32.49■■■□□ 2.79
COCH-205ENST00000475087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.45■■■□□ 2.796e-7■■□□□ 11.4
COCH-205ENST00000475087 CCNB3Q8WWL7 1395 aa32.43■■■□□ 2.78
COCH-205ENST00000475087 MYOM3Q5VTT5 1437 aa32.42■■■□□ 2.78
COCH-205ENST00000475087 TTC37Q6PGP7 1564 aa32.4■■■□□ 2.78
COCH-205ENST00000475087 GPATCH8Q9UKJ3 1502 aaKnown RBP32.39■■■□□ 2.78
COCH-205ENST00000475087 ABCA9Q8IUA7 1624 aa32.37■■■□□ 2.77
COCH-205ENST00000475087 RRBP1Q9P2E9 1410 aaKnown RBP32.35■■■□□ 2.77
COCH-205ENST00000475087 FGD6Q6ZV73 1430 aa32.34■■■□□ 2.77
COCH-205ENST00000475087 TRIM26Q12899 539 aaPredicted RBP32.33■■■□□ 2.77
COCH-205ENST00000475087 MIA2Q96PC5 1412 aa32.33■■■□□ 2.77
COCH-205ENST00000475087 CDC42BPAQ5VT25 1732 aa32.33■■■□□ 2.77
COCH-205ENST00000475087 ITSN2Q9NZM3 1697 aa32.32■■■□□ 2.77
COCH-205ENST00000475087 GLI2P10070 1586 aa32.3■■■□□ 2.76
COCH-205ENST00000475087 DIP2BQ9P265 1576 aa32.3■■■□□ 2.76
COCH-205ENST00000475087 CFDP1Q9UEE9 299 aaPredicted RBP32.29■■■□□ 2.76
COCH-205ENST00000475087 PLCH2O75038 1416 aa32.29■■■□□ 2.76
COCH-205ENST00000475087 MYO5CQ9NQX4 1742 aa32.28■■■□□ 2.76
COCH-205ENST00000475087 PREX2Q70Z35 1606 aa32.28■■■□□ 2.76
COCH-205ENST00000475087 FAM69CQ0P6D2 419 aa32.25■■■□□ 2.75
COCH-205ENST00000475087 CDC42BPBQ9Y5S2 1711 aa32.24■■■□□ 2.75
COCH-205ENST00000475087 CD109Q6YHK3 1445 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms