RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 KIAA0586Q9BVV6 1533 aa30.73■■■□□ 2.51
EFNA1-204ENST00000474413 PRG4Q92954 1404 aaPredicted RBP30.68■■■□□ 2.5
EFNA1-204ENST00000474413 RAPGEF2Q9Y4G8 1499 aa30.64■■■□□ 2.5
EFNA1-204ENST00000474413 JPH4Q96JJ6 628 aa30.63■■■□□ 2.49
EFNA1-204ENST00000474413 PRXQ9BXM0 1461 aa30.58■■■□□ 2.49
EFNA1-204ENST00000474413 IQGAP2Q13576 1575 aa30.58■■■□□ 2.49
EFNA1-204ENST00000474413 CTTNBP2Q8WZ74 1663 aa30.47■■■□□ 2.47
EFNA1-204ENST00000474413 CHIC1Q5VXU3 224 aa30.44■■■□□ 2.46
EFNA1-204ENST00000474413 DISP1Q96F81 1524 aa30.42■■■□□ 2.46
EFNA1-204ENST00000474413 UGGT2Q9NYU1 1516 aa30.42■■■□□ 2.46
EFNA1-204ENST00000474413 EEA1Q15075 1411 aa30.39■■■□□ 2.45
EFNA1-204ENST00000474413 ADCY10Q96PN6 1610 aa30.38■■■□□ 2.45
EFNA1-204ENST00000474413 KIAA0556O60303 1618 aa30.33■■■□□ 2.45
EFNA1-204ENST00000474413 CSRNP3Q8WYN3 585 aa30.32■■■□□ 2.44
EFNA1-204ENST00000474413 CARMIL2Q6F5E8 1435 aa30.29■■■□□ 2.44
EFNA1-204ENST00000474413 TNIKQ9UKE5 1360 aa30.26■■■□□ 2.43
EFNA1-204ENST00000474413 PTPRGP23470 1445 aa30.23■■■□□ 2.43
EFNA1-204ENST00000474413 KIF21BO75037 1637 aa30.23■■■□□ 2.43
EFNA1-204ENST00000474413 FAM9AQ8IZU1 332 aaPredicted RBP30.19■■■□□ 2.42
EFNA1-204ENST00000474413 TRHP20396 242 aaPredicted RBP30.18■■■□□ 2.42
EFNA1-204ENST00000474413 MAPKBP1O60336 1514 aa30.16■■■□□ 2.42
EFNA1-204ENST00000474413 KIF13AQ9H1H9 1805 aa30.12■■■□□ 2.41
EFNA1-204ENST00000474413 UHRF1BP1LA0JNW5 1464 aa30.12■■■□□ 2.41
EFNA1-204ENST00000474413 SAMD9Q5K651 1589 aa30.11■■■□□ 2.41
EFNA1-204ENST00000474413 GOLGA3Q08378 1498 aa30.1■■■□□ 2.41
EFNA1-204ENST00000474413 ABCC2Q92887 1545 aa30.1■■■□□ 2.41
EFNA1-204ENST00000474413 TTBK1Q5TCY1 1321 aaPredicted RBP30.09■■■□□ 2.41
EFNA1-204ENST00000474413 UACAQ9BZF9 1416 aa30.07■■■□□ 2.4
EFNA1-204ENST00000474413 DIP2BQ9P265 1576 aa30.03■■■□□ 2.4
EFNA1-204ENST00000474413 PLB1Q6P1J6 1458 aa30.02■■■□□ 2.4
EFNA1-204ENST00000474413 ABCA8O94911 1581 aa30.02■■■□□ 2.4
EFNA1-204ENST00000474413 ABCC10Q5T3U5 1492 aa29.99■■■□□ 2.39
EFNA1-204ENST00000474413 KDM5BQ9UGL1 1544 aa29.99■■■□□ 2.39
EFNA1-204ENST00000474413 ZCCHC11Q5TAX3 1644 aaKnown RBP29.96■■■□□ 2.39
EFNA1-204ENST00000474413 NPM1P06748 294 aaKnown RBP eCLIP29.91■■■□□ 2.38
EFNA1-204ENST00000474413 ASXL2Q76L83 1435 aa29.9■■■□□ 2.38
EFNA1-204ENST00000474413 P3H3Q8IVL6 736 aa29.86■■■□□ 2.37
EFNA1-204ENST00000474413 FHOD3Q2V2M9 1422 aa29.84■■■□□ 2.37
EFNA1-204ENST00000474413 EFCAB5A4FU69 1503 aa29.84■■■□□ 2.37
EFNA1-204ENST00000474413 EHMT2Q96KQ7 1210 aa29.82■■■□□ 2.36
EFNA1-204ENST00000474413 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
EFNA1-204ENST00000474413 GLI2P10070 1586 aa29.78■■■□□ 2.36
EFNA1-204ENST00000474413 RAPGEF6Q8TEU7 1601 aa29.78■■■□□ 2.36
EFNA1-204ENST00000474413 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.35
EFNA1-204ENST00000474413 EPRSP07814 1512 aaKnown RBP29.75■■■□□ 2.35
EFNA1-204ENST00000474413 PPRC1Q5VV67 1664 aaKnown RBP29.74■■■□□ 2.35
EFNA1-204ENST00000474413 WDR7Q9Y4E6 1490 aa29.73■■■□□ 2.35
EFNA1-204ENST00000474413 ARHGAP35Q9NRY4 1499 aa29.72■■■□□ 2.35
EFNA1-204ENST00000474413 NUP153P49790 1475 aaKnown RBP29.71■■■□□ 2.35
EFNA1-204ENST00000474413 UBTFP17480 764 aaKnown RBP29.7■■■□□ 2.35
EFNA1-204ENST00000474413 ATP10BO94823 1461 aa29.69■■■□□ 2.34
EFNA1-204ENST00000474413 MAP3K4Q9Y6R4 1608 aa29.69■■■□□ 2.34
EFNA1-204ENST00000474413 TSPOAP1O95153 1857 aa29.69■■■□□ 2.34
EFNA1-204ENST00000474413 ARID3CA6NKF2 412 aa29.6■■■□□ 2.33
EFNA1-204ENST00000474413 CFAP43Q8NDM7 1665 aa29.52■■■□□ 2.32
EFNA1-204ENST00000474413 KDM6BO15054 1643 aa29.51■■■□□ 2.31
EFNA1-204ENST00000474413 CDK13Q14004 1512 aaKnown RBP29.5■■■□□ 2.31
EFNA1-204ENST00000474413 FMN1Q68DA7 1419 aa29.47■■■□□ 2.31
EFNA1-204ENST00000474413 LRRIQ1Q96JM4 1722 aa29.46■■■□□ 2.31
EFNA1-204ENST00000474413 HECW1Q76N89 1606 aa29.45■■■□□ 2.31
EFNA1-204ENST00000474413 ABCA9Q8IUA7 1624 aa29.45■■■□□ 2.31
EFNA1-204ENST00000474413 PCF11O94913 1555 aaKnown RBP29.43■■■□□ 2.3
EFNA1-204ENST00000474413 COL17A1Q9UMD9 1497 aaPredicted RBP29.42■■■□□ 2.3
EFNA1-204ENST00000474413 MAGI3Q5TCQ9 1506 aa29.42■■■□□ 2.3
EFNA1-204ENST00000474413 KCNH8Q96L42 1107 aa29.41■■■□□ 2.3
EFNA1-204ENST00000474413 CD109Q6YHK3 1445 aa29.39■■■□□ 2.3
EFNA1-204ENST00000474413 TEX14Q8IWB6 1497 aa29.39■■■□□ 2.3
EFNA1-204ENST00000474413 CLIP1P30622 1438 aa29.38■■■□□ 2.29
EFNA1-204ENST00000474413 TTC37Q6PGP7 1564 aa29.31■■■□□ 2.28
EFNA1-204ENST00000474413 CASKIN1Q8WXD9 1431 aa29.3■■■□□ 2.28
EFNA1-204ENST00000474413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.3■■■□□ 2.28
EFNA1-204ENST00000474413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.29■■■□□ 2.28
EFNA1-204ENST00000474413 HNRNPUL2Q1KMD3 747 aaKnown RBP29.29■■■□□ 2.28
EFNA1-204ENST00000474413 CEP162Q5TB80 1403 aa29.27■■■□□ 2.28
EFNA1-204ENST00000474413 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
EFNA1-204ENST00000474413 KIF14Q15058 1648 aa29.23■■■□□ 2.27
EFNA1-204ENST00000474413 PLEKHD1A6NEE1 506 aa29.21■■■□□ 2.27
EFNA1-204ENST00000474413 ARAP3Q8WWN8 1544 aa29.18■■■□□ 2.26
EFNA1-204ENST00000474413 LOC105371045A0A1W2PR82 267 aa29.17■■■□□ 2.26
EFNA1-204ENST00000474413 ATP1B4Q9UN42 357 aaPredicted RBP29.17■■■□□ 2.26
EFNA1-204ENST00000474413 CCDC18Q5T9S5 1454 aa29.17■■■□□ 2.26
EFNA1-204ENST00000474413 TROQ12816 1431 aaPredicted RBP29.15■■■□□ 2.26
EFNA1-204ENST00000474413 NEO1Q92859 1461 aa29.15■■■□□ 2.26
EFNA1-204ENST00000474413 FRMPD1Q5SYB0 1578 aa29.14■■■□□ 2.26
EFNA1-204ENST00000474413 MYO5CQ9NQX4 1742 aa29.06■■■□□ 2.24
EFNA1-204ENST00000474413 CFAP74Q9C0B2 1584 aa29.06■■■□□ 2.24
EFNA1-204ENST00000474413 FANCAO15360 1455 aa29.06■■■□□ 2.24
EFNA1-204ENST00000474413 PHLDB1Q86UU1 1377 aa29.03■■■□□ 2.24
EFNA1-204ENST00000474413 PLCH2O75038 1416 aa29.03■■■□□ 2.24
EFNA1-204ENST00000474413 RICTORQ6R327 1708 aa29.02■■■□□ 2.24
EFNA1-204ENST00000474413 CDK11AQ9UQ88 783 aaPredicted RBP29■■■□□ 2.23
EFNA1-204ENST00000474413 AKNAQ7Z591 1439 aa28.99■■■□□ 2.23
EFNA1-204ENST00000474413 PREX2Q70Z35 1606 aa28.97■■■□□ 2.23
EFNA1-204ENST00000474413 CDC42BPBQ9Y5S2 1711 aa28.96■■■□□ 2.23
EFNA1-204ENST00000474413 RAPGEF3O95398 923 aa28.94■■■□□ 2.22
EFNA1-204ENST00000474413 CDC42BPAQ5VT25 1732 aa28.93■■■□□ 2.22
EFNA1-204ENST00000474413 VPS8Q8N3P4 1428 aa28.91■■■□□ 2.22
EFNA1-204ENST00000474413 DENND4BO75064 1496 aaPredicted RBP28.91■■■□□ 2.22
EFNA1-204ENST00000474413 ZMYM4Q5VZL5 1548 aa28.9■■■□□ 2.22
EFNA1-204ENST00000474413 ADGRL1O94910 1474 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms