RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 GOLGA3Q08378 1498 aa33.01■■■□□ 2.87
CDHR3-210ENST00000474330 EHMT2Q96KQ7 1210 aa33■■■□□ 2.87
CDHR3-210ENST00000474330 RAPGEF2Q9Y4G8 1499 aa32.93■■■□□ 2.86
CDHR3-210ENST00000474330 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
CDHR3-210ENST00000474330 NUP160Q12769 1436 aa32.91■■■□□ 2.86
CDHR3-210ENST00000474330 CARMIL1Q5VZK9 1371 aa32.91■■■□□ 2.86
CDHR3-210ENST00000474330 ARAP1Q96P48 1450 aa32.87■■■□□ 2.85
CDHR3-210ENST00000474330 CYB5RLQ6IPT4 315 aa32.86■■■□□ 2.85
CDHR3-210ENST00000474330 TNIKQ9UKE5 1360 aa32.85■■■□□ 2.85
CDHR3-210ENST00000474330 UBTFP17480 764 aaKnown RBP32.84■■■□□ 2.85
CDHR3-210ENST00000474330 SHROOM2Q13796 1616 aa32.71■■■□□ 2.83
CDHR3-210ENST00000474330 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.83
CDHR3-210ENST00000474330 CEP162Q5TB80 1403 aa32.6■■■□□ 2.81
CDHR3-210ENST00000474330 JPH4Q96JJ6 628 aa32.6■■■□□ 2.81
CDHR3-210ENST00000474330 CTTNBP2Q8WZ74 1663 aa32.59■■■□□ 2.81
CDHR3-210ENST00000474330 KIAA0586Q9BVV6 1533 aa32.54■■■□□ 2.8
CDHR3-210ENST00000474330 PRG4Q92954 1404 aaPredicted RBP32.52■■■□□ 2.8
CDHR3-210ENST00000474330 CLIP1P30622 1438 aa32.45■■■□□ 2.78
CDHR3-210ENST00000474330 IQGAP2Q13576 1575 aa32.39■■■□□ 2.78
CDHR3-210ENST00000474330 RANGAP1P46060 587 aaPredicted RBP32.33■■■□□ 2.77
CDHR3-210ENST00000474330 ARHGAP35Q9NRY4 1499 aa32.25■■■□□ 2.75
CDHR3-210ENST00000474330 UGGT2Q9NYU1 1516 aa32.21■■■□□ 2.75
CDHR3-210ENST00000474330 TRHP20396 242 aaPredicted RBP32.2■■■□□ 2.75
CDHR3-210ENST00000474330 EFCAB5A4FU69 1503 aa32.19■■■□□ 2.74
CDHR3-210ENST00000474330 DISP1Q96F81 1524 aa32.16■■■□□ 2.74
CDHR3-210ENST00000474330 SAMD9Q5K651 1589 aa32.15■■■□□ 2.74
CDHR3-210ENST00000474330 CARMIL2Q6F5E8 1435 aa32.14■■■□□ 2.74
CDHR3-210ENST00000474330 VPS8Q8N3P4 1428 aa32.12■■■□□ 2.73
CDHR3-210ENST00000474330 ADCY10Q96PN6 1610 aa32.1■■■□□ 2.73
CDHR3-210ENST00000474330 PTPRGP23470 1445 aa32.1■■■□□ 2.73
CDHR3-210ENST00000474330 KIAA0556O60303 1618 aa32.07■■■□□ 2.73
CDHR3-210ENST00000474330 TTBK1Q5TCY1 1321 aaPredicted RBP32.04■■■□□ 2.72
CDHR3-210ENST00000474330 P3H3Q8IVL6 736 aa32■■■□□ 2.71
CDHR3-210ENST00000474330 FHOD3Q2V2M9 1422 aa31.99■■■□□ 2.71
CDHR3-210ENST00000474330 NPM1P06748 294 aaKnown RBP eCLIP31.93■■■□□ 2.7
CDHR3-210ENST00000474330 MAPKBP1O60336 1514 aa31.89■■■□□ 2.7
CDHR3-210ENST00000474330 KIF13AQ9H1H9 1805 aa31.89■■■□□ 2.69
CDHR3-210ENST00000474330 FMN1Q68DA7 1419 aa31.89■■■□□ 2.69
CDHR3-210ENST00000474330 UACAQ9BZF9 1416 aa31.88■■■□□ 2.69
CDHR3-210ENST00000474330 UHRF1BP1LA0JNW5 1464 aa31.87■■■□□ 2.69
CDHR3-210ENST00000474330 ABCC2Q92887 1545 aa31.84■■■□□ 2.69
CDHR3-210ENST00000474330 PCF11O94913 1555 aaKnown RBP31.78■■■□□ 2.68
CDHR3-210ENST00000474330 ABCC10Q5T3U5 1492 aa31.78■■■□□ 2.68
CDHR3-210ENST00000474330 CASKIN1Q8WXD9 1431 aa31.77■■■□□ 2.68
CDHR3-210ENST00000474330 APLP2Q06481 763 aa31.77■■■□□ 2.68
CDHR3-210ENST00000474330 PLB1Q6P1J6 1458 aa31.75■■■□□ 2.67
CDHR3-210ENST00000474330 FYCO1Q9BQS8 1478 aa31.75■■■□□ 2.67
CDHR3-210ENST00000474330 KDM5BQ9UGL1 1544 aa31.74■■■□□ 2.67
CDHR3-210ENST00000474330 DIP2BQ9P265 1576 aa31.73■■■□□ 2.67
CDHR3-210ENST00000474330 FAM69CQ0P6D2 419 aa31.72■■■□□ 2.67
CDHR3-210ENST00000474330 ABCA8O94911 1581 aa31.71■■■□□ 2.67
CDHR3-210ENST00000474330 MAP3K1Q13233 1512 aa31.68■■■□□ 2.66
CDHR3-210ENST00000474330 ZCCHC11Q5TAX3 1644 aaKnown RBP31.68■■■□□ 2.66
CDHR3-210ENST00000474330 RAPGEF6Q8TEU7 1601 aa31.68■■■□□ 2.66
CDHR3-210ENST00000474330 PPARGC1BQ86YN6 1023 aaKnown RBP31.67■■■□□ 2.66
CDHR3-210ENST00000474330 ASXL2Q76L83 1435 aa31.67■■■□□ 2.66
CDHR3-210ENST00000474330 HECW1Q76N89 1606 aa31.63■■■□□ 2.65
CDHR3-210ENST00000474330 TIAM1Q13009 1591 aa31.62■■■□□ 2.65
CDHR3-210ENST00000474330 ATP1B4Q9UN42 357 aaPredicted RBP31.61■■■□□ 2.65
CDHR3-210ENST00000474330 CFAP43Q8NDM7 1665 aa31.59■■■□□ 2.65
CDHR3-210ENST00000474330 LRRIQ1Q96JM4 1722 aa31.57■■■□□ 2.64
CDHR3-210ENST00000474330 KANK4Q5T7N3 995 aaPredicted RBP31.53■■■□□ 2.64
CDHR3-210ENST00000474330 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
CDHR3-210ENST00000474330 TSPOAP1O95153 1857 aa31.52■■■□□ 2.64
CDHR3-210ENST00000474330 GLI2P10070 1586 aa31.52■■■□□ 2.64
CDHR3-210ENST00000474330 CCDC18Q5T9S5 1454 aa31.5■■■□□ 2.63
CDHR3-210ENST00000474330 TRIM26Q12899 539 aaPredicted RBP31.49■■■□□ 2.63
CDHR3-210ENST00000474330 EPRSP07814 1512 aaKnown RBP31.49■■■□□ 2.63
CDHR3-210ENST00000474330 ATP10BO94823 1461 aa31.47■■■□□ 2.63
CDHR3-210ENST00000474330 LRRC9Q6ZRR7 1453 aa31.47■■■□□ 2.63
CDHR3-210ENST00000474330 WDR7Q9Y4E6 1490 aa31.45■■■□□ 2.63
CDHR3-210ENST00000474330 ARID3CA6NKF2 412 aa31.44■■■□□ 2.62
CDHR3-210ENST00000474330 CDK13Q14004 1512 aaKnown RBP31.42■■■□□ 2.62
CDHR3-210ENST00000474330 PPRC1Q5VV67 1664 aaKnown RBP31.42■■■□□ 2.62
CDHR3-210ENST00000474330 MAP3K4Q9Y6R4 1608 aa31.39■■■□□ 2.62
CDHR3-210ENST00000474330 KCNH8Q96L42 1107 aa31.34■■■□□ 2.61
CDHR3-210ENST00000474330 PCGF6Q9BYE7 350 aa31.32■■■□□ 2.6
CDHR3-210ENST00000474330 MTUS2Q5JR59 1369 aa31.31■■■□□ 2.6
CDHR3-210ENST00000474330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.3■■■□□ 2.6
CDHR3-210ENST00000474330 HNRNPUL2Q1KMD3 747 aaKnown RBP31.3■■■□□ 2.6
CDHR3-210ENST00000474330 EHBP1L1Q8N3D4 1523 aa31.29■■■□□ 2.6
CDHR3-210ENST00000474330 MAGI3Q5TCQ9 1506 aa31.28■■■□□ 2.6
CDHR3-210ENST00000474330 KDM6BO15054 1643 aa31.25■■■□□ 2.59
CDHR3-210ENST00000474330 CDK11AQ9UQ88 783 aaPredicted RBP31.24■■■□□ 2.59
CDHR3-210ENST00000474330 SUPT6HQ7KZ85 1726 aaKnown RBP31.2■■■□□ 2.59
CDHR3-210ENST00000474330 CD109Q6YHK3 1445 aa31.2■■■□□ 2.58
CDHR3-210ENST00000474330 TEX14Q8IWB6 1497 aa31.16■■■□□ 2.58
CDHR3-210ENST00000474330 COL17A1Q9UMD9 1497 aaPredicted RBP31.15■■■□□ 2.58
CDHR3-210ENST00000474330 PLEKHD1A6NEE1 506 aa31.15■■■□□ 2.58
CDHR3-210ENST00000474330 TROQ12816 1431 aaPredicted RBP31.15■■■□□ 2.58
CDHR3-210ENST00000474330 ABCA9Q8IUA7 1624 aa31.14■■■□□ 2.58
CDHR3-210ENST00000474330 NCOA2Q15596 1464 aa31.14■■■□□ 2.58
CDHR3-210ENST00000474330 PHLDB1Q86UU1 1377 aa31.13■■■□□ 2.57
CDHR3-210ENST00000474330 RRBP1Q9P2E9 1410 aaKnown RBP31.11■■■□□ 2.57
CDHR3-210ENST00000474330 KIF14Q15058 1648 aa31.08■■■□□ 2.57
CDHR3-210ENST00000474330 CCNB3Q8WWL7 1395 aa31.02■■■□□ 2.56
CDHR3-210ENST00000474330 MYOM3Q5VTT5 1437 aa31■■■□□ 2.55
CDHR3-210ENST00000474330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.98■■■□□ 2.55
CDHR3-210ENST00000474330 FGD6Q6ZV73 1430 aa30.96■■■□□ 2.55
CDHR3-210ENST00000474330 TTC37Q6PGP7 1564 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms