RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 HNRNPUL2Q1KMD3 747 aaKnown RBP31.93■■■□□ 2.7
RNF220-209ENST00000474064 ACIN1Q9UKV3 1341 aaKnown RBP31.92■■■□□ 2.7
RNF220-209ENST00000474064 TARBP1Q13395 1621 aaKnown RBP31.88■■■□□ 2.69
RNF220-209ENST00000474064 NEUROD1Q13562 356 aa31.85■■■□□ 2.69
RNF220-209ENST00000474064 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.683e-7■■■■□ 24.8
RNF220-209ENST00000474064 ATP1B4Q9UN42 357 aaPredicted RBP31.76■■■□□ 2.67
RNF220-209ENST00000474064 FHOD3Q2V2M9 1422 aa31.76■■■□□ 2.67
RNF220-209ENST00000474064 ERCC6Q03468 1493 aa31.76■■■□□ 2.67
RNF220-209ENST00000474064 CTTNBP2Q8WZ74 1663 aa31.73■■■□□ 2.67
RNF220-209ENST00000474064 GTF3C3Q9Y5Q9 886 aa31.68■■■□□ 2.66
RNF220-209ENST00000474064 WDR62O43379 1518 aa31.67■■■□□ 2.66
RNF220-209ENST00000474064 FHAD1B1AJZ9 1412 aa31.67■■■□□ 2.66
RNF220-209ENST00000474064 ZNF608Q9ULD9 1512 aaPredicted RBP31.65■■■□□ 2.66
RNF220-209ENST00000474064 PBRM1Q86U86 1689 aa31.64■■■□□ 2.66
RNF220-209ENST00000474064 EFCAB5A4FU69 1503 aa31.62■■■□□ 2.65
RNF220-209ENST00000474064 IFT140Q96RY7 1462 aa31.62■■■□□ 2.65
RNF220-209ENST00000474064 PCF11O94913 1555 aaKnown RBP31.61■■■□□ 2.65
RNF220-209ENST00000474064 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
RNF220-209ENST00000474064 GRIN2BQ13224 1484 aa31.57■■■□□ 2.64
RNF220-209ENST00000474064 ADAMTS12P58397 1594 aa31.51■■■□□ 2.63
RNF220-209ENST00000474064 MAP3K1Q13233 1512 aa31.51■■■□□ 2.63
RNF220-209ENST00000474064 CENPBP07199 599 aaPredicted RBP31.5■■■□□ 2.63
RNF220-209ENST00000474064 LRRC9Q6ZRR7 1453 aa31.5■■■□□ 2.63
RNF220-209ENST00000474064 RRBP1Q9P2E9 1410 aaKnown RBP31.5■■■□□ 2.63
RNF220-209ENST00000474064 CASKIN1Q8WXD9 1431 aa31.46■■■□□ 2.63
RNF220-209ENST00000474064 THOC2Q8NI27 1593 aaKnown RBP31.46■■■□□ 2.63
RNF220-209ENST00000474064 CCNB3Q8WWL7 1395 aa31.46■■■□□ 2.63
RNF220-209ENST00000474064 FYCO1Q9BQS8 1478 aa31.46■■■□□ 2.63
RNF220-209ENST00000474064 ITGAEP38570 1179 aa31.46■■■□□ 2.63
RNF220-209ENST00000474064 FMN1Q68DA7 1419 aa31.46■■■□□ 2.63
RNF220-209ENST00000474064 SAMD9Q5K651 1589 aa31.44■■■□□ 2.62
RNF220-209ENST00000474064 DIEXFQ68CQ4 756 aaKnown RBP31.4■■■□□ 2.62
RNF220-209ENST00000474064 CFAP43Q8NDM7 1665 aa31.4■■■□□ 2.62
RNF220-209ENST00000474064 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
RNF220-209ENST00000474064 EIF4G3O43432 1585 aaKnown RBP31.4■■■□□ 2.62
RNF220-209ENST00000474064 PHLDB1Q86UU1 1377 aa31.37■■■□□ 2.61
RNF220-209ENST00000474064 IQGAP2Q13576 1575 aa31.34■■■□□ 2.61
RNF220-209ENST00000474064 FAM50AQ14320 339 aaKnown RBP31.29■■■□□ 2.6
RNF220-209ENST00000474064 FBLN2P98095 1184 aa31.27■■■□□ 2.6
RNF220-209ENST00000474064 CHMP7Q8WUX9 453 aaPredicted RBP31.24■■■□□ 2.59
RNF220-209ENST00000474064 MTUS2Q5JR59 1369 aa31.23■■■□□ 2.59
RNF220-209ENST00000474064 GRIN2AQ12879 1464 aa31.22■■■□□ 2.59
RNF220-209ENST00000474064 LRRIQ1Q96JM4 1722 aa31.18■■■□□ 2.58
RNF220-209ENST00000474064 ARID3CA6NKF2 412 aa31.17■■■□□ 2.58
RNF220-209ENST00000474064 KIAA0586Q9BVV6 1533 aa31.16■■■□□ 2.58
RNF220-209ENST00000474064 MAGI1Q96QZ7 1491 aaPredicted RBP31.16■■■□□ 2.58
RNF220-209ENST00000474064 DHX57Q6P158 1386 aaKnown RBP31.13■■■□□ 2.57
RNF220-209ENST00000474064 UGGT2Q9NYU1 1516 aa31.13■■■□□ 2.57
RNF220-209ENST00000474064 SYNJ2O15056 1496 aa31.1■■■□□ 2.57
RNF220-209ENST00000474064 DISP1Q96F81 1524 aa31.04■■■□□ 2.56
RNF220-209ENST00000474064 RAB3GAP2Q9H2M9 1393 aa31.03■■■□□ 2.56
RNF220-209ENST00000474064 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
RNF220-209ENST00000474064 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
RNF220-209ENST00000474064 NCOA2Q15596 1464 aa31.01■■■□□ 2.56
RNF220-209ENST00000474064 FGD6Q6ZV73 1430 aa31.01■■■□□ 2.55
RNF220-209ENST00000474064 KIAA0556O60303 1618 aa31.01■■■□□ 2.55
RNF220-209ENST00000474064 CCDC18Q5T9S5 1454 aa31■■■□□ 2.55
RNF220-209ENST00000474064 MAGI3Q5TCQ9 1506 aa30.99■■■□□ 2.55
RNF220-209ENST00000474064 EPRSP07814 1512 aaKnown RBP30.99■■■□□ 2.55
RNF220-209ENST00000474064 CDK13Q14004 1512 aaKnown RBP30.99■■■□□ 2.55
RNF220-209ENST00000474064 EHBP1L1Q8N3D4 1523 aa30.97■■■□□ 2.55
RNF220-209ENST00000474064 SETD5Q9C0A6 1442 aa30.95■■■□□ 2.55
RNF220-209ENST00000474064 SUPT6HQ7KZ85 1726 aaKnown RBP30.93■■■□□ 2.54
RNF220-209ENST00000474064 CLSPNQ9HAW4 1339 aa30.93■■■□□ 2.54
RNF220-209ENST00000474064 JPH4Q96JJ6 628 aa30.91■■■□□ 2.54
RNF220-209ENST00000474064 YTHDC1Q96MU7 727 aaKnown RBP30.91■■■□□ 2.54
RNF220-209ENST00000474064 MYOM3Q5VTT5 1437 aa30.91■■■□□ 2.54
RNF220-209ENST00000474064 NUP160Q12769 1436 aa30.89■■■□□ 2.54
RNF220-209ENST00000474064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.89■■■□□ 2.53
RNF220-209ENST00000474064 ZNF316A6NFI3 1004 aaPredicted RBP30.84■■■□□ 2.53
RNF220-209ENST00000474064 NUP153P49790 1475 aaKnown RBP30.81■■■□□ 2.52
RNF220-209ENST00000474064 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
RNF220-209ENST00000474064 RAPGEF6Q8TEU7 1601 aa30.79■■■□□ 2.52
RNF220-209ENST00000474064 PTPRKQ15262 1439 aa30.79■■■□□ 2.52
RNF220-209ENST00000474064 CARMIL2Q6F5E8 1435 aa30.79■■■□□ 2.52
RNF220-209ENST00000474064 PLB1Q6P1J6 1458 aa30.77■■■□□ 2.52
RNF220-209ENST00000474064 PTPN23Q9H3S7 1636 aa30.75■■■□□ 2.51
RNF220-209ENST00000474064 MAPKBP1O60336 1514 aa30.7■■■□□ 2.51
RNF220-209ENST00000474064 CHIC2Q9UKJ5 165 aa30.68■■■□□ 2.5
RNF220-209ENST00000474064 CDK11AQ9UQ88 783 aaPredicted RBP30.68■■■□□ 2.5
RNF220-209ENST00000474064 PRG4Q92954 1404 aaPredicted RBP30.63■■■□□ 2.49
RNF220-209ENST00000474064 HFM1A2PYH4 1435 aa30.62■■■□□ 2.49
RNF220-209ENST00000474064 RRP7BPQ9NSQ0 103 aa30.61■■■□□ 2.49
RNF220-209ENST00000474064 MIER1Q8N108 512 aa30.6■■■□□ 2.49
RNF220-209ENST00000474064 SIN3AQ96ST3 1273 aa30.6■■■□□ 2.49
RNF220-209ENST00000474064 TCOF1Q13428 1488 aaKnown RBP30.6■■■□□ 2.49
RNF220-209ENST00000474064 CHD1O14646 1710 aa30.6■■■□□ 2.49
RNF220-209ENST00000474064 MIA2Q96PC5 1412 aa30.58■■■□□ 2.49
RNF220-209ENST00000474064 NAIPQ13075 1403 aa30.57■■■□□ 2.48
RNF220-209ENST00000474064 ZNF644Q9H582 1327 aaPredicted RBP30.55■■■□□ 2.48
RNF220-209ENST00000474064 TROQ12816 1431 aaPredicted RBP30.54■■■□□ 2.48
RNF220-209ENST00000474064 PTPRGP23470 1445 aa30.49■■■□□ 2.47
RNF220-209ENST00000474064 ABCA8O94911 1581 aa30.48■■■□□ 2.47
RNF220-209ENST00000474064 PLEKHD1A6NEE1 506 aa30.45■■■□□ 2.47
RNF220-209ENST00000474064 KIF14Q15058 1648 aa30.44■■■□□ 2.46
RNF220-209ENST00000474064 CFDP1Q9UEE9 299 aaPredicted RBP30.44■■■□□ 2.46
RNF220-209ENST00000474064 ZNF777Q9ULD5 760 aaPredicted RBP30.44■■■□□ 2.46
RNF220-209ENST00000474064 UACAQ9BZF9 1416 aa30.44■■■□□ 2.46
RNF220-209ENST00000474064 ATP10BO94823 1461 aa30.43■■■□□ 2.46
RNF220-209ENST00000474064 TRIM52Q96A61 297 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms