RNA–Protein interactions for RNA: ENST00000473633.1

AGAP3-212, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 3,751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-212ENST00000473633 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
AGAP3-212ENST00000473633 NEFLP07196 543 aa13.65□□□□□ -0.23
AGAP3-212ENST00000473633 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
AGAP3-212ENST00000473633 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
AGAP3-212ENST00000473633 TOPBP1Q92547 1522 aa13.58□□□□□ -0.24
AGAP3-212ENST00000473633 POLA1P09884 1462 aaPredicted RBP13.58□□□□□ -0.24
AGAP3-212ENST00000473633 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
AGAP3-212ENST00000473633 AQRO60306 1485 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■■■□ 25.5
AGAP3-212ENST00000473633 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
AGAP3-212ENST00000473633 PRXQ9BXM0 1461 aa13.54□□□□□ -0.24
AGAP3-212ENST00000473633 CNGB1Q14028 1251 aaPredicted RBP13.54□□□□□ -0.24
AGAP3-212ENST00000473633 HIRIP3Q9BW71 556 aaPredicted RBP13.53□□□□□ -0.24
AGAP3-212ENST00000473633 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
AGAP3-212ENST00000473633 BCANQ96GW7 911 aa13.51□□□□□ -0.25
AGAP3-212ENST00000473633 FHOD3Q2V2M9 1422 aa13.5□□□□□ -0.25
AGAP3-212ENST00000473633 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
AGAP3-212ENST00000473633 KIF21BO75037 1637 aa13.48□□□□□ -0.25
AGAP3-212ENST00000473633 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
AGAP3-212ENST00000473633 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
AGAP3-212ENST00000473633 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
AGAP3-212ENST00000473633 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
AGAP3-212ENST00000473633 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
AGAP3-212ENST00000473633 CHIC2Q9UKJ5 165 aa13.42□□□□□ -0.26
AGAP3-212ENST00000473633 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
AGAP3-212ENST00000473633 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.27
AGAP3-212ENST00000473633 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
AGAP3-212ENST00000473633 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
AGAP3-212ENST00000473633 MTUS2Q5JR59 1369 aa13.39□□□□□ -0.27
AGAP3-212ENST00000473633 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
AGAP3-212ENST00000473633 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
AGAP3-212ENST00000473633 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
AGAP3-212ENST00000473633 SIN3AQ96ST3 1273 aa13.37□□□□□ -0.27
AGAP3-212ENST00000473633 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
AGAP3-212ENST00000473633 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
AGAP3-212ENST00000473633 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
AGAP3-212ENST00000473633 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
AGAP3-212ENST00000473633 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
AGAP3-212ENST00000473633 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
AGAP3-212ENST00000473633 RRP7BPQ9NSQ0 103 aa13.31□□□□□ -0.28
AGAP3-212ENST00000473633 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
AGAP3-212ENST00000473633 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
AGAP3-212ENST00000473633 FKBP8Q14318 412 aa13.3□□□□□ -0.28
AGAP3-212ENST00000473633 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
AGAP3-212ENST00000473633 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
AGAP3-212ENST00000473633 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
AGAP3-212ENST00000473633 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
AGAP3-212ENST00000473633 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
AGAP3-212ENST00000473633 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
AGAP3-212ENST00000473633 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
AGAP3-212ENST00000473633 RTL5Q5HYW3 569 aaPredicted RBP13.23□□□□□ -0.29
AGAP3-212ENST00000473633 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
AGAP3-212ENST00000473633 ZNF326Q5BKZ1 582 aaKnown RBP13.22□□□□□ -0.29
AGAP3-212ENST00000473633 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
AGAP3-212ENST00000473633 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
AGAP3-212ENST00000473633 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
AGAP3-212ENST00000473633 ANP32CO43423 234 aa13.19□□□□□ -0.3
AGAP3-212ENST00000473633 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
AGAP3-212ENST00000473633 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
AGAP3-212ENST00000473633 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
AGAP3-212ENST00000473633 PLEKHD1A6NEE1 506 aa13.16□□□□□ -0.3
AGAP3-212ENST00000473633 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
AGAP3-212ENST00000473633 RBM19Q9Y4C8 960 aaKnown RBP13.15□□□□□ -0.3
AGAP3-212ENST00000473633 TONSLQ96HA7 1378 aa13.15□□□□□ -0.3
AGAP3-212ENST00000473633 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
AGAP3-212ENST00000473633 FOXD1Q16676 465 aa13.13□□□□□ -0.31
AGAP3-212ENST00000473633 PCF11O94913 1555 aaKnown RBP13.13□□□□□ -0.31
AGAP3-212ENST00000473633 CASKIN1Q8WXD9 1431 aa13.12□□□□□ -0.31
AGAP3-212ENST00000473633 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
AGAP3-212ENST00000473633 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
AGAP3-212ENST00000473633 CUL7Q14999 1698 aa13.1□□□□□ -0.31
AGAP3-212ENST00000473633 TIAM1Q13009 1591 aa13.09□□□□□ -0.31
AGAP3-212ENST00000473633 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.31
AGAP3-212ENST00000473633 ABCA5Q8WWZ7 1642 aa13.08□□□□□ -0.32
AGAP3-212ENST00000473633 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
AGAP3-212ENST00000473633 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.32
AGAP3-212ENST00000473633 GRIN2AQ12879 1464 aa13.07□□□□□ -0.32
AGAP3-212ENST00000473633 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
AGAP3-212ENST00000473633 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
AGAP3-212ENST00000473633 WDR62O43379 1518 aa13.05□□□□□ -0.32
AGAP3-212ENST00000473633 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
AGAP3-212ENST00000473633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.32
AGAP3-212ENST00000473633 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
AGAP3-212ENST00000473633 PLB1Q6P1J6 1458 aa13.04□□□□□ -0.32
AGAP3-212ENST00000473633 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
AGAP3-212ENST00000473633 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
AGAP3-212ENST00000473633 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
AGAP3-212ENST00000473633 DEKP35659 375 aaKnown RBP13.03□□□□□ -0.32
AGAP3-212ENST00000473633 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
AGAP3-212ENST00000473633 PTPRGP23470 1445 aa13.03□□□□□ -0.32
AGAP3-212ENST00000473633 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
AGAP3-212ENST00000473633 HNRNPMP52272 730 aaKnown RBP eCLIP13.02□□□□□ -0.32
AGAP3-212ENST00000473633 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.32
AGAP3-212ENST00000473633 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.32
AGAP3-212ENST00000473633 NBR1Q14596 966 aa13.02□□□□□ -0.33
AGAP3-212ENST00000473633 FGD6Q6ZV73 1430 aa13.02□□□□□ -0.33
AGAP3-212ENST00000473633 SYNJ2O15056 1496 aa13.01□□□□□ -0.33
AGAP3-212ENST00000473633 TSPY4P0CV99 314 aa13□□□□□ -0.33
AGAP3-212ENST00000473633 TSPY10P0CW01 314 aa13□□□□□ -0.33
AGAP3-212ENST00000473633 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
AGAP3-212ENST00000473633 ADAMTS12P58397 1594 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms