RNA–Protein interactions for RNA: ENST00000473551.5

ARVCF-207, Transcript of ARVCF, delta catenin family member, humanhuman

TSL 2

Gene ARVCF, Length 2,108 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCF-207ENST00000473551 ERCC6Q03468 1493 aa29.61■■■□□ 2.33
ARVCF-207ENST00000473551 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
ARVCF-207ENST00000473551 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
ARVCF-207ENST00000473551 AQRO60306 1485 aaKnown RBP eCLIP29.59■■■□□ 2.335e-7■■■■■ 31.5
ARVCF-207ENST00000473551 IFT140Q96RY7 1462 aa29.58■■■□□ 2.33
ARVCF-207ENST00000473551 P3H3Q8IVL6 736 aa29.56■■■□□ 2.32
ARVCF-207ENST00000473551 MAP3K1Q13233 1512 aa29.54■■■□□ 2.32
ARVCF-207ENST00000473551 FHOD3Q2V2M9 1422 aa29.53■■■□□ 2.32
ARVCF-207ENST00000473551 HNRNPUL2Q1KMD3 747 aaKnown RBP29.51■■■□□ 2.32
ARVCF-207ENST00000473551 TIAM1Q13009 1591 aa29.51■■■□□ 2.31
ARVCF-207ENST00000473551 GRIN2BQ13224 1484 aa29.51■■■□□ 2.31
ARVCF-207ENST00000473551 PCF11O94913 1555 aaKnown RBP29.48■■■□□ 2.31
ARVCF-207ENST00000473551 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
ARVCF-207ENST00000473551 ZNF608Q9ULD9 1512 aaPredicted RBP29.47■■■□□ 2.31
ARVCF-207ENST00000473551 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
ARVCF-207ENST00000473551 SAMD9Q5K651 1589 aa29.43■■■□□ 2.3
ARVCF-207ENST00000473551 FYCO1Q9BQS8 1478 aa29.42■■■□□ 2.3
ARVCF-207ENST00000473551 FMN1Q68DA7 1419 aa29.41■■■□□ 2.3
ARVCF-207ENST00000473551 RRBP1Q9P2E9 1410 aaKnown RBP29.41■■■□□ 2.3
ARVCF-207ENST00000473551 CASKIN1Q8WXD9 1431 aa29.39■■■□□ 2.3
ARVCF-207ENST00000473551 LRRC9Q6ZRR7 1453 aa29.39■■■□□ 2.29
ARVCF-207ENST00000473551 CFAP43Q8NDM7 1665 aa29.38■■■□□ 2.29
ARVCF-207ENST00000473551 ATP1B4Q9UN42 357 aaPredicted RBP29.35■■■□□ 2.29
ARVCF-207ENST00000473551 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
ARVCF-207ENST00000473551 CCNB3Q8WWL7 1395 aa29.3■■■□□ 2.28
ARVCF-207ENST00000473551 IQGAP2Q13576 1575 aa29.3■■■□□ 2.28
ARVCF-207ENST00000473551 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
ARVCF-207ENST00000473551 PHLDB1Q86UU1 1377 aa29.18■■■□□ 2.26
ARVCF-207ENST00000473551 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
ARVCF-207ENST00000473551 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
ARVCF-207ENST00000473551 KIAA0586Q9BVV6 1533 aa29.14■■■□□ 2.25
ARVCF-207ENST00000473551 UGGT2Q9NYU1 1516 aa29.14■■■□□ 2.25
ARVCF-207ENST00000473551 LRRIQ1Q96JM4 1722 aa29.1■■■□□ 2.25
ARVCF-207ENST00000473551 SYNJ2O15056 1496 aa29.09■■■□□ 2.25
ARVCF-207ENST00000473551 MTUS2Q5JR59 1369 aa29.06■■■□□ 2.24
ARVCF-207ENST00000473551 CHMP7Q8WUX9 453 aaPredicted RBP29.06■■■□□ 2.24
ARVCF-207ENST00000473551 ITGAEP38570 1179 aa29.05■■■□□ 2.24
ARVCF-207ENST00000473551 HECW1Q76N89 1606 aa29.01■■■□□ 2.24
ARVCF-207ENST00000473551 CCDC18Q5T9S5 1454 aa29.01■■■□□ 2.24
ARVCF-207ENST00000473551 FAM50AQ14320 339 aaKnown RBP28.99■■■□□ 2.23
ARVCF-207ENST00000473551 KIAA0556O60303 1618 aa28.99■■■□□ 2.23
ARVCF-207ENST00000473551 DISP1Q96F81 1524 aa28.98■■■□□ 2.23
ARVCF-207ENST00000473551 FBLN2P98095 1184 aa28.97■■■□□ 2.23
ARVCF-207ENST00000473551 CEP170Q5SW79 1584 aa28.97■■■□□ 2.23
ARVCF-207ENST00000473551 EHBP1L1Q8N3D4 1523 aa28.95■■■□□ 2.23
ARVCF-207ENST00000473551 DHX57Q6P158 1386 aaKnown RBP28.95■■■□□ 2.23
ARVCF-207ENST00000473551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.94■■■□□ 2.223e-6■■□□□ 14.1
ARVCF-207ENST00000473551 CLSPNQ9HAW4 1339 aa28.93■■■□□ 2.22
ARVCF-207ENST00000473551 EPRSP07814 1512 aaKnown RBP28.92■■■□□ 2.22
ARVCF-207ENST00000473551 SUPT6HQ7KZ85 1726 aaKnown RBP28.91■■■□□ 2.22
ARVCF-207ENST00000473551 FGD6Q6ZV73 1430 aa28.91■■■□□ 2.22
ARVCF-207ENST00000473551 NCOA2Q15596 1464 aa28.9■■■□□ 2.22
ARVCF-207ENST00000473551 NUP160Q12769 1436 aa28.9■■■□□ 2.22
ARVCF-207ENST00000473551 MAGI3Q5TCQ9 1506 aa28.87■■■□□ 2.21
ARVCF-207ENST00000473551 RAB3GAP2Q9H2M9 1393 aa28.85■■■□□ 2.21
ARVCF-207ENST00000473551 MYOM3Q5VTT5 1437 aa28.83■■■□□ 2.21
ARVCF-207ENST00000473551 SETD5Q9C0A6 1442 aa28.83■■■□□ 2.21
ARVCF-207ENST00000473551 CDK13Q14004 1512 aaKnown RBP28.83■■■□□ 2.21
ARVCF-207ENST00000473551 ARHGEF11O15085 1522 aa28.81■■■□□ 2.2
ARVCF-207ENST00000473551 RAPGEF6Q8TEU7 1601 aa28.78■■■□□ 2.2
ARVCF-207ENST00000473551 JPH4Q96JJ6 628 aa28.78■■■□□ 2.2
ARVCF-207ENST00000473551 CARMIL2Q6F5E8 1435 aa28.77■■■□□ 2.2
ARVCF-207ENST00000473551 NUP153P49790 1475 aaKnown RBP28.75■■■□□ 2.19
ARVCF-207ENST00000473551 ARID3CA6NKF2 412 aa28.75■■■□□ 2.19
ARVCF-207ENST00000473551 PTPN23Q9H3S7 1636 aa28.69■■■□□ 2.18
ARVCF-207ENST00000473551 PLB1Q6P1J6 1458 aa28.64■■■□□ 2.18
ARVCF-207ENST00000473551 CDK11AQ9UQ88 783 aaPredicted RBP28.63■■■□□ 2.17
ARVCF-207ENST00000473551 ZNF316A6NFI3 1004 aaPredicted RBP28.63■■■□□ 2.17
ARVCF-207ENST00000473551 PTPRKQ15262 1439 aa28.62■■■□□ 2.17
ARVCF-207ENST00000473551 TCOF1Q13428 1488 aaKnown RBP28.61■■■□□ 2.17
ARVCF-207ENST00000473551 MIA2Q96PC5 1412 aa28.6■■■□□ 2.17
ARVCF-207ENST00000473551 CHD1O14646 1710 aa28.6■■■□□ 2.17
ARVCF-207ENST00000473551 MAPKBP1O60336 1514 aa28.59■■■□□ 2.17
ARVCF-207ENST00000473551 HFM1A2PYH4 1435 aa28.58■■■□□ 2.17
ARVCF-207ENST00000473551 DIEXFQ68CQ4 756 aaKnown RBP28.55■■■□□ 2.16
ARVCF-207ENST00000473551 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
ARVCF-207ENST00000473551 TROQ12816 1431 aaPredicted RBP28.51■■■□□ 2.15
ARVCF-207ENST00000473551 ABCA8O94911 1581 aa28.51■■■□□ 2.15
ARVCF-207ENST00000473551 NAIPQ13075 1403 aa28.49■■■□□ 2.15
ARVCF-207ENST00000473551 PTPRGP23470 1445 aa28.42■■■□□ 2.14
ARVCF-207ENST00000473551 ADCY10Q96PN6 1610 aa28.41■■■□□ 2.14
ARVCF-207ENST00000473551 SHROOM2Q13796 1616 aa28.41■■■□□ 2.14
ARVCF-207ENST00000473551 UACAQ9BZF9 1416 aa28.4■■■□□ 2.14
ARVCF-207ENST00000473551 CHIC2Q9UKJ5 165 aa28.39■■■□□ 2.14
ARVCF-207ENST00000473551 AKNAQ7Z591 1439 aa28.39■■■□□ 2.14
ARVCF-207ENST00000473551 ATP10BO94823 1461 aa28.38■■■□□ 2.13
ARVCF-207ENST00000473551 KIF14Q15058 1648 aa28.37■■■□□ 2.13
ARVCF-207ENST00000473551 GCC2Q8IWJ2 1684 aa28.37■■■□□ 2.13
ARVCF-207ENST00000473551 ITSN2Q9NZM3 1697 aa28.36■■■□□ 2.13
ARVCF-207ENST00000473551 PLEKHD1A6NEE1 506 aa28.36■■■□□ 2.13
ARVCF-207ENST00000473551 RRP7BPQ9NSQ0 103 aa28.36■■■□□ 2.13
ARVCF-207ENST00000473551 DAPK1P53355 1430 aa28.33■■■□□ 2.13
ARVCF-207ENST00000473551 DNMT1P26358 1616 aaKnown RBP28.33■■■□□ 2.13
ARVCF-207ENST00000473551 GPATCH8Q9UKJ3 1502 aaKnown RBP28.32■■■□□ 2.12
ARVCF-207ENST00000473551 SIN3AQ96ST3 1273 aa28.32■■■□□ 2.12
ARVCF-207ENST00000473551 ZNF644Q9H582 1327 aaPredicted RBP28.32■■■□□ 2.12
ARVCF-207ENST00000473551 CFDP1Q9UEE9 299 aaPredicted RBP28.31■■■□□ 2.12
ARVCF-207ENST00000473551 NEUROD1Q13562 356 aa28.3■■■□□ 2.12
ARVCF-207ENST00000473551 ABCC5O15440 1437 aa28.29■■■□□ 2.12
ARVCF-207ENST00000473551 TIMELESSQ9UNS1 1208 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms