RNA–Protein interactions for RNA: ENST00000473243.5

ATP13A1-207, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-207ENST00000473243 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
ATP13A1-207ENST00000473243 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
ATP13A1-207ENST00000473243 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
ATP13A1-207ENST00000473243 MIER1Q8N108 512 aa20.39■□□□□ 0.85
ATP13A1-207ENST00000473243 CFDP1Q9UEE9 299 aaPredicted RBP20.37■□□□□ 0.85
ATP13A1-207ENST00000473243 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
ATP13A1-207ENST00000473243 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
ATP13A1-207ENST00000473243 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
ATP13A1-207ENST00000473243 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
ATP13A1-207ENST00000473243 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
ATP13A1-207ENST00000473243 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
ATP13A1-207ENST00000473243 CLSPNQ9HAW4 1339 aa20.25■□□□□ 0.83
ATP13A1-207ENST00000473243 EIF4G2P78344 907 aaKnown RBP eCLIP20.22■□□□□ 0.83
ATP13A1-207ENST00000473243 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
ATP13A1-207ENST00000473243 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
ATP13A1-207ENST00000473243 FMN1Q68DA7 1419 aa20.17■□□□□ 0.82
ATP13A1-207ENST00000473243 FHOD3Q2V2M9 1422 aa20.16■□□□□ 0.82
ATP13A1-207ENST00000473243 DAXXQ9UER7 740 aaPredicted RBP20.15■□□□□ 0.82
ATP13A1-207ENST00000473243 ARHGAP35Q9NRY4 1499 aa20.15■□□□□ 0.82
ATP13A1-207ENST00000473243 IGF1RP08069 1367 aa20.13■□□□□ 0.81
ATP13A1-207ENST00000473243 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
ATP13A1-207ENST00000473243 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
ATP13A1-207ENST00000473243 RGL3Q3MIN7 710 aa20.12■□□□□ 0.81
ATP13A1-207ENST00000473243 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
ATP13A1-207ENST00000473243 STAG3Q9UJ98 1225 aa20.1■□□□□ 0.81
ATP13A1-207ENST00000473243 FKBP8Q14318 412 aa20.09■□□□□ 0.81
ATP13A1-207ENST00000473243 MRS2Q9HD23 443 aa20.07■□□□□ 0.8
ATP13A1-207ENST00000473243 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
ATP13A1-207ENST00000473243 TMC1Q8TDI8 760 aa20.06■□□□□ 0.8
ATP13A1-207ENST00000473243 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
ATP13A1-207ENST00000473243 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
ATP13A1-207ENST00000473243 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
ATP13A1-207ENST00000473243 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
ATP13A1-207ENST00000473243 CFTRP13569 1480 aa20.03■□□□□ 0.8
ATP13A1-207ENST00000473243 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
ATP13A1-207ENST00000473243 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.79
ATP13A1-207ENST00000473243 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
ATP13A1-207ENST00000473243 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
ATP13A1-207ENST00000473243 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
ATP13A1-207ENST00000473243 CARD11Q9BXL7 1154 aa19.95■□□□□ 0.78
ATP13A1-207ENST00000473243 FOXD1Q16676 465 aa19.94■□□□□ 0.78
ATP13A1-207ENST00000473243 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
ATP13A1-207ENST00000473243 MYT1Q01538 1121 aa19.93■□□□□ 0.78
ATP13A1-207ENST00000473243 CANXP27824 592 aaKnown RBP19.93■□□□□ 0.78
ATP13A1-207ENST00000473243 NEFMP07197 916 aa19.92■□□□□ 0.78
ATP13A1-207ENST00000473243 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
ATP13A1-207ENST00000473243 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
ATP13A1-207ENST00000473243 NESP48681 1621 aa19.89■□□□□ 0.78
ATP13A1-207ENST00000473243 KIF21BO75037 1637 aa19.88■□□□□ 0.77
ATP13A1-207ENST00000473243 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
ATP13A1-207ENST00000473243 PKD2Q13563 968 aa19.86■□□□□ 0.77
ATP13A1-207ENST00000473243 CC2D2AQ9P2K1 1620 aa19.86■□□□□ 0.77
ATP13A1-207ENST00000473243 DCAF11Q8TEB1 546 aa19.85■□□□□ 0.77
ATP13A1-207ENST00000473243 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.77
ATP13A1-207ENST00000473243 CUX1P39880 1505 aa19.83■□□□□ 0.76
ATP13A1-207ENST00000473243 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
ATP13A1-207ENST00000473243 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.767e-7■■■■□ 24.8
ATP13A1-207ENST00000473243 PPP1R15AO75807 674 aaPredicted RBP19.81■□□□□ 0.76
ATP13A1-207ENST00000473243 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
ATP13A1-207ENST00000473243 IRX6P78412 446 aaPredicted RBP19.8■□□□□ 0.76
ATP13A1-207ENST00000473243 CCDC18Q5T9S5 1454 aa19.8■□□□□ 0.76
ATP13A1-207ENST00000473243 PRXQ9BXM0 1461 aa19.8■□□□□ 0.76
ATP13A1-207ENST00000473243 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
ATP13A1-207ENST00000473243 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
ATP13A1-207ENST00000473243 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
ATP13A1-207ENST00000473243 HSPA5P11021 654 aaKnown RBP19.78■□□□□ 0.76
ATP13A1-207ENST00000473243 ERICH3Q5RHP9 1530 aa19.78■□□□□ 0.76
ATP13A1-207ENST00000473243 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
ATP13A1-207ENST00000473243 NUP155O75694 1391 aa19.76■□□□□ 0.75
ATP13A1-207ENST00000473243 EFCAB2Q5VUJ9 269 aa19.76■□□□□ 0.75
ATP13A1-207ENST00000473243 ANKRD30AQ9BXX3 1397 aa19.76■□□□□ 0.75
ATP13A1-207ENST00000473243 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
ATP13A1-207ENST00000473243 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
ATP13A1-207ENST00000473243 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
ATP13A1-207ENST00000473243 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
ATP13A1-207ENST00000473243 L3MBTL2Q969R5 705 aa19.71■□□□□ 0.75
ATP13A1-207ENST00000473243 CDCA8Q53HL2 280 aa19.71■□□□□ 0.75
ATP13A1-207ENST00000473243 PHLDB1Q86UU1 1377 aa19.71■□□□□ 0.75
ATP13A1-207ENST00000473243 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
ATP13A1-207ENST00000473243 CCDC136Q96JN2 1154 aa19.7■□□□□ 0.74
ATP13A1-207ENST00000473243 KNSTRNQ9Y448 316 aa19.7■□□□□ 0.74
ATP13A1-207ENST00000473243 POLA1P09884 1462 aaPredicted RBP19.7■□□□□ 0.74
ATP13A1-207ENST00000473243 ZBTB47Q9UFB7 747 aaPredicted RBP19.69■□□□□ 0.74
ATP13A1-207ENST00000473243 PTPRGP23470 1445 aa19.68■□□□□ 0.74
ATP13A1-207ENST00000473243 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
ATP13A1-207ENST00000473243 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
ATP13A1-207ENST00000473243 KANK1Q14678 1352 aa19.65■□□□□ 0.74
ATP13A1-207ENST00000473243 GGT6Q6P531 493 aa19.65■□□□□ 0.74
ATP13A1-207ENST00000473243 ARID4BQ4LE39 1312 aaPredicted RBP19.65■□□□□ 0.74
ATP13A1-207ENST00000473243 SUPT16HQ9Y5B9 1047 aaKnown RBP19.65■□□□□ 0.74
ATP13A1-207ENST00000473243 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.73
ATP13A1-207ENST00000473243 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
ATP13A1-207ENST00000473243 FGD6Q6ZV73 1430 aa19.62■□□□□ 0.73
ATP13A1-207ENST00000473243 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
ATP13A1-207ENST00000473243 CCER2I3L3R5 266 aa19.61■□□□□ 0.73
ATP13A1-207ENST00000473243 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
ATP13A1-207ENST00000473243 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
ATP13A1-207ENST00000473243 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
ATP13A1-207ENST00000473243 TMF1P82094 1093 aa19.6■□□□□ 0.73
ATP13A1-207ENST00000473243 CC2D1BQ5T0F9 858 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms