RNA–Protein interactions for RNA: ENST00000473243.5

ATP13A1-207, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-207ENST00000473243 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
ATP13A1-207ENST00000473243 DCAF8L2P0C7V8 631 aa26.38■■□□□ 1.81
ATP13A1-207ENST00000473243 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
ATP13A1-207ENST00000473243 SHROOM4Q9ULL8 1493 aa25.24■■□□□ 1.63
ATP13A1-207ENST00000473243 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
ATP13A1-207ENST00000473243 FAM9AQ8IZU1 332 aaPredicted RBP23.64■■□□□ 1.37
ATP13A1-207ENST00000473243 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
ATP13A1-207ENST00000473243 PCGF6Q9BYE7 350 aa23.21■■□□□ 1.31
ATP13A1-207ENST00000473243 ABCC9O60706 1549 aa23.19■■□□□ 1.3
ATP13A1-207ENST00000473243 APLP2Q06481 763 aa23.1■■□□□ 1.29
ATP13A1-207ENST00000473243 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
ATP13A1-207ENST00000473243 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
ATP13A1-207ENST00000473243 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
ATP13A1-207ENST00000473243 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
ATP13A1-207ENST00000473243 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
ATP13A1-207ENST00000473243 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
ATP13A1-207ENST00000473243 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.243e-7■■□□□ 13.3
ATP13A1-207ENST00000473243 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
ATP13A1-207ENST00000473243 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
ATP13A1-207ENST00000473243 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
ATP13A1-207ENST00000473243 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
ATP13A1-207ENST00000473243 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
ATP13A1-207ENST00000473243 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.18
ATP13A1-207ENST00000473243 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
ATP13A1-207ENST00000473243 HRCP23327 699 aa22.19■■□□□ 1.14
ATP13A1-207ENST00000473243 HNRNPUL2Q1KMD3 747 aaKnown RBP21.98■■□□□ 1.11
ATP13A1-207ENST00000473243 ITGAEP38570 1179 aa21.97■■□□□ 1.11
ATP13A1-207ENST00000473243 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
ATP13A1-207ENST00000473243 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.1
ATP13A1-207ENST00000473243 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
ATP13A1-207ENST00000473243 NACADO15069 1562 aa21.87■■□□□ 1.09
ATP13A1-207ENST00000473243 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
ATP13A1-207ENST00000473243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
ATP13A1-207ENST00000473243 CENPBP07199 599 aaPredicted RBP21.81■■□□□ 1.08
ATP13A1-207ENST00000473243 PELP1Q8IZL8 1130 aaKnown RBP21.72■■□□□ 1.07
ATP13A1-207ENST00000473243 YTHDC1Q96MU7 727 aaKnown RBP21.63■■□□□ 1.05
ATP13A1-207ENST00000473243 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
ATP13A1-207ENST00000473243 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
ATP13A1-207ENST00000473243 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
ATP13A1-207ENST00000473243 P3H3Q8IVL6 736 aa21.48■■□□□ 1.03
ATP13A1-207ENST00000473243 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
ATP13A1-207ENST00000473243 FBLN2P98095 1184 aa21.4■■□□□ 1.02
ATP13A1-207ENST00000473243 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
ATP13A1-207ENST00000473243 DIEXFQ68CQ4 756 aaKnown RBP21.33■■□□□ 1
ATP13A1-207ENST00000473243 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
ATP13A1-207ENST00000473243 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
ATP13A1-207ENST00000473243 WRNQ14191 1432 aaPredicted RBP eCLIP21.26■□□□□ 0.99
ATP13A1-207ENST00000473243 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
ATP13A1-207ENST00000473243 ARID3CA6NKF2 412 aa21.23■□□□□ 0.99
ATP13A1-207ENST00000473243 TRIM52Q96A61 297 aa21.22■□□□□ 0.99
ATP13A1-207ENST00000473243 POLR3GLQ9BT43 218 aa21.21■□□□□ 0.99
ATP13A1-207ENST00000473243 NEFLP07196 543 aa21.16■□□□□ 0.98
ATP13A1-207ENST00000473243 EEA1Q15075 1411 aa21.16■□□□□ 0.98
ATP13A1-207ENST00000473243 CLIP1P30622 1438 aa21.12■□□□□ 0.97
ATP13A1-207ENST00000473243 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
ATP13A1-207ENST00000473243 CNGB1Q14028 1251 aaPredicted RBP21.07■□□□□ 0.96
ATP13A1-207ENST00000473243 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
ATP13A1-207ENST00000473243 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
ATP13A1-207ENST00000473243 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
ATP13A1-207ENST00000473243 WIZO95785 1651 aa21.01■□□□□ 0.95
ATP13A1-207ENST00000473243 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
ATP13A1-207ENST00000473243 SOGA1O94964 1423 aa20.98■□□□□ 0.95
ATP13A1-207ENST00000473243 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
ATP13A1-207ENST00000473243 KIF27Q86VH2 1401 aa20.94■□□□□ 0.94
ATP13A1-207ENST00000473243 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
ATP13A1-207ENST00000473243 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
ATP13A1-207ENST00000473243 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
ATP13A1-207ENST00000473243 ZNF326Q5BKZ1 582 aaKnown RBP20.87■□□□□ 0.93
ATP13A1-207ENST00000473243 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
ATP13A1-207ENST00000473243 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
ATP13A1-207ENST00000473243 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
ATP13A1-207ENST00000473243 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
ATP13A1-207ENST00000473243 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
ATP13A1-207ENST00000473243 CHIC2Q9UKJ5 165 aa20.77■□□□□ 0.92
ATP13A1-207ENST00000473243 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
ATP13A1-207ENST00000473243 ERICH6Q7L0X2 663 aa20.75■□□□□ 0.91
ATP13A1-207ENST00000473243 ANP32CO43423 234 aa20.73■□□□□ 0.91
ATP13A1-207ENST00000473243 CUX2O14529 1486 aa20.7■□□□□ 0.9
ATP13A1-207ENST00000473243 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
ATP13A1-207ENST00000473243 TONSLQ96HA7 1378 aa20.66■□□□□ 0.9
ATP13A1-207ENST00000473243 SLC4A1APQ9BWU0 796 aaKnown RBP20.66■□□□□ 0.9
ATP13A1-207ENST00000473243 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
ATP13A1-207ENST00000473243 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
ATP13A1-207ENST00000473243 RRP7BPQ9NSQ0 103 aa20.55■□□□□ 0.88
ATP13A1-207ENST00000473243 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
ATP13A1-207ENST00000473243 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
ATP13A1-207ENST00000473243 TSPY4P0CV99 314 aa20.52■□□□□ 0.87
ATP13A1-207ENST00000473243 TSPY10P0CW01 314 aa20.52■□□□□ 0.87
ATP13A1-207ENST00000473243 VPS8Q8N3P4 1428 aa20.51■□□□□ 0.87
ATP13A1-207ENST00000473243 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
ATP13A1-207ENST00000473243 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
ATP13A1-207ENST00000473243 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
ATP13A1-207ENST00000473243 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
ATP13A1-207ENST00000473243 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATP13A1-207ENST00000473243 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
ATP13A1-207ENST00000473243 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
ATP13A1-207ENST00000473243 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
ATP13A1-207ENST00000473243 BCANQ96GW7 911 aa20.44■□□□□ 0.86
ATP13A1-207ENST00000473243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.866e-7■■□□□ 13.8
ATP13A1-207ENST00000473243 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms