RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PRG4Q92954 1404 aaPredicted RBP23.22■■□□□ 1.31
HMGN1-211ENST00000471260 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
HMGN1-211ENST00000471260 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
HMGN1-211ENST00000471260 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
HMGN1-211ENST00000471260 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
HMGN1-211ENST00000471260 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
HMGN1-211ENST00000471260 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
HMGN1-211ENST00000471260 IQGAP2Q13576 1575 aa22.95■■□□□ 1.26
HMGN1-211ENST00000471260 PTPRGP23470 1445 aa22.91■■□□□ 1.26
HMGN1-211ENST00000471260 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
HMGN1-211ENST00000471260 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
HMGN1-211ENST00000471260 MAPKBP1O60336 1514 aa22.87■■□□□ 1.25
HMGN1-211ENST00000471260 UGGT2Q9NYU1 1516 aa22.85■■□□□ 1.25
HMGN1-211ENST00000471260 DISP1Q96F81 1524 aa22.82■■□□□ 1.24
HMGN1-211ENST00000471260 ABCC10Q5T3U5 1492 aa22.82■■□□□ 1.24
HMGN1-211ENST00000471260 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
HMGN1-211ENST00000471260 KIF13AQ9H1H9 1805 aa22.8■■□□□ 1.24
HMGN1-211ENST00000471260 FAM69CQ0P6D2 419 aa22.79■■□□□ 1.24
HMGN1-211ENST00000471260 UHRF1BP1LA0JNW5 1464 aa22.77■■□□□ 1.24
HMGN1-211ENST00000471260 ABCC2Q92887 1545 aa22.76■■□□□ 1.23
HMGN1-211ENST00000471260 TTBK1Q5TCY1 1321 aaPredicted RBP22.76■■□□□ 1.23
HMGN1-211ENST00000471260 UACAQ9BZF9 1416 aa22.75■■□□□ 1.23
HMGN1-211ENST00000471260 CTTNBP2Q8WZ74 1663 aa22.74■■□□□ 1.23
HMGN1-211ENST00000471260 KIAA0556O60303 1618 aa22.73■■□□□ 1.23
HMGN1-211ENST00000471260 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
HMGN1-211ENST00000471260 DIP2BQ9P265 1576 aa22.72■■□□□ 1.23
HMGN1-211ENST00000471260 EEA1Q15075 1411 aa22.71■■□□□ 1.23
HMGN1-211ENST00000471260 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
HMGN1-211ENST00000471260 PLB1Q6P1J6 1458 aa22.67■■□□□ 1.22
HMGN1-211ENST00000471260 KDM5BQ9UGL1 1544 aa22.64■■□□□ 1.21
HMGN1-211ENST00000471260 ASXL2Q76L83 1435 aa22.64■■□□□ 1.21
HMGN1-211ENST00000471260 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
HMGN1-211ENST00000471260 GLI2P10070 1586 aa22.58■■□□□ 1.2
HMGN1-211ENST00000471260 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
HMGN1-211ENST00000471260 ABCA8O94911 1581 aa22.52■■□□□ 1.2
HMGN1-211ENST00000471260 EPRSP07814 1512 aaKnown RBP22.51■■□□□ 1.19
HMGN1-211ENST00000471260 TSPOAP1O95153 1857 aa22.5■■□□□ 1.19
HMGN1-211ENST00000471260 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
HMGN1-211ENST00000471260 KDM6BO15054 1643 aa22.47■■□□□ 1.19
HMGN1-211ENST00000471260 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
HMGN1-211ENST00000471260 SAMD9Q5K651 1589 aa22.46■■□□□ 1.19
HMGN1-211ENST00000471260 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-211ENST00000471260 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
HMGN1-211ENST00000471260 KIF21BO75037 1637 aa22.43■■□□□ 1.18
HMGN1-211ENST00000471260 MAP3K4Q9Y6R4 1608 aa22.41■■□□□ 1.18
HMGN1-211ENST00000471260 PPRC1Q5VV67 1664 aaKnown RBP22.4■■□□□ 1.18
HMGN1-211ENST00000471260 TEX14Q8IWB6 1497 aa22.4■■□□□ 1.18
HMGN1-211ENST00000471260 ATP10BO94823 1461 aa22.34■■□□□ 1.17
HMGN1-211ENST00000471260 KCNH8Q96L42 1107 aa22.33■■□□□ 1.17
HMGN1-211ENST00000471260 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
HMGN1-211ENST00000471260 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
HMGN1-211ENST00000471260 RAPGEF6Q8TEU7 1601 aa22.31■■□□□ 1.16
HMGN1-211ENST00000471260 MAGI3Q5TCQ9 1506 aa22.31■■□□□ 1.16
HMGN1-211ENST00000471260 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
HMGN1-211ENST00000471260 RANGAP1P46060 587 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-211ENST00000471260 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
HMGN1-211ENST00000471260 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
HMGN1-211ENST00000471260 COL17A1Q9UMD9 1497 aaPredicted RBP22.26■■□□□ 1.15
HMGN1-211ENST00000471260 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
HMGN1-211ENST00000471260 NUP153P49790 1475 aaKnown RBP22.24■■□□□ 1.15
HMGN1-211ENST00000471260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
HMGN1-211ENST00000471260 HNRNPUL2Q1KMD3 747 aaKnown RBP22.23■■□□□ 1.15
HMGN1-211ENST00000471260 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
HMGN1-211ENST00000471260 PHLDB1Q86UU1 1377 aa22.18■■□□□ 1.14
HMGN1-211ENST00000471260 PLEKHD1A6NEE1 506 aa22.17■■□□□ 1.14
HMGN1-211ENST00000471260 KDM4FA0A1W2PPD8 638 aa22.16■■□□□ 1.14
HMGN1-211ENST00000471260 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
HMGN1-211ENST00000471260 FMN1Q68DA7 1419 aa22.14■■□□□ 1.14
HMGN1-211ENST00000471260 ARAP3Q8WWN8 1544 aa22.12■■□□□ 1.13
HMGN1-211ENST00000471260 ARHGAP35Q9NRY4 1499 aa22.12■■□□□ 1.13
HMGN1-211ENST00000471260 NEO1Q92859 1461 aa22.08■■□□□ 1.12
HMGN1-211ENST00000471260 HECW1Q76N89 1606 aa22.03■■□□□ 1.12
HMGN1-211ENST00000471260 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-211ENST00000471260 ADGRL1O94910 1474 aa22.02■■□□□ 1.12
HMGN1-211ENST00000471260 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
HMGN1-211ENST00000471260 CDK13Q14004 1512 aaKnown RBP22■■□□□ 1.11
HMGN1-211ENST00000471260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22■■□□□ 1.11
HMGN1-211ENST00000471260 RAPGEF3O95398 923 aa21.95■■□□□ 1.1
HMGN1-211ENST00000471260 FANCAO15360 1455 aa21.95■■□□□ 1.1
HMGN1-211ENST00000471260 CFAP74Q9C0B2 1584 aa21.95■■□□□ 1.1
HMGN1-211ENST00000471260 AKNAQ7Z591 1439 aa21.94■■□□□ 1.1
HMGN1-211ENST00000471260 TTC37Q6PGP7 1564 aa21.91■■□□□ 1.1
HMGN1-211ENST00000471260 PLCH2O75038 1416 aa21.91■■□□□ 1.1
HMGN1-211ENST00000471260 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-211ENST00000471260 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.1
HMGN1-211ENST00000471260 TROQ12816 1431 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-211ENST00000471260 CLIP1P30622 1438 aa21.88■■□□□ 1.09
HMGN1-211ENST00000471260 FRMPD1Q5SYB0 1578 aa21.87■■□□□ 1.09
HMGN1-211ENST00000471260 CCDC18Q5T9S5 1454 aa21.86■■□□□ 1.09
HMGN1-211ENST00000471260 EFCAB2Q5VUJ9 269 aa21.84■■□□□ 1.09
HMGN1-211ENST00000471260 KIF14Q15058 1648 aa21.84■■□□□ 1.09
HMGN1-211ENST00000471260 RICTORQ6R327 1708 aa21.83■■□□□ 1.09
HMGN1-211ENST00000471260 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
HMGN1-211ENST00000471260 PCF11O94913 1555 aaKnown RBP21.82■■□□□ 1.08
HMGN1-211ENST00000471260 LRRIQ1Q96JM4 1722 aa21.81■■□□□ 1.08
HMGN1-211ENST00000471260 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
HMGN1-211ENST00000471260 MAGI2Q86UL8 1455 aa21.8■■□□□ 1.08
HMGN1-211ENST00000471260 ZMYM4Q5VZL5 1548 aa21.79■■□□□ 1.08
HMGN1-211ENST00000471260 SCAPERQ9BY12 1400 aa21.79■■□□□ 1.08
HMGN1-211ENST00000471260 ARHGEF40Q8TER5 1519 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms