RNA–Protein interactions for RNA: ENST00000471234.5

TNPO3-203, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-203ENST00000471234 KIF21BO75037 1637 aa13.6□□□□□ -0.23
TNPO3-203ENST00000471234 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
TNPO3-203ENST00000471234 FHOD3Q2V2M9 1422 aa13.58□□□□□ -0.24
TNPO3-203ENST00000471234 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
TNPO3-203ENST00000471234 VPS8Q8N3P4 1428 aa13.57□□□□□ -0.24
TNPO3-203ENST00000471234 CUL7Q14999 1698 aa13.57□□□□□ -0.24
TNPO3-203ENST00000471234 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
TNPO3-203ENST00000471234 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
TNPO3-203ENST00000471234 IFT140Q96RY7 1462 aa13.52□□□□□ -0.24
TNPO3-203ENST00000471234 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
TNPO3-203ENST00000471234 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
TNPO3-203ENST00000471234 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
TNPO3-203ENST00000471234 SNAPC4Q5SXM2 1469 aa13.49□□□□□ -0.25
TNPO3-203ENST00000471234 JPH4Q96JJ6 628 aa13.47□□□□□ -0.25
TNPO3-203ENST00000471234 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
TNPO3-203ENST00000471234 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
TNPO3-203ENST00000471234 ZNF777Q9ULD5 760 aaPredicted RBP13.41□□□□□ -0.26
TNPO3-203ENST00000471234 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
TNPO3-203ENST00000471234 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
TNPO3-203ENST00000471234 CHIC2Q9UKJ5 165 aa13.38□□□□□ -0.27
TNPO3-203ENST00000471234 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
TNPO3-203ENST00000471234 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
TNPO3-203ENST00000471234 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
TNPO3-203ENST00000471234 SHROOM2Q13796 1616 aa13.33□□□□□ -0.27
TNPO3-203ENST00000471234 CDK11AQ9UQ88 783 aaPredicted RBP13.33□□□□□ -0.28
TNPO3-203ENST00000471234 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
TNPO3-203ENST00000471234 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
TNPO3-203ENST00000471234 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
TNPO3-203ENST00000471234 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
TNPO3-203ENST00000471234 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
TNPO3-203ENST00000471234 PLEKHD1A6NEE1 506 aa13.28□□□□□ -0.28
TNPO3-203ENST00000471234 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
TNPO3-203ENST00000471234 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
TNPO3-203ENST00000471234 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
TNPO3-203ENST00000471234 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
TNPO3-203ENST00000471234 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
TNPO3-203ENST00000471234 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
TNPO3-203ENST00000471234 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
TNPO3-203ENST00000471234 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
TNPO3-203ENST00000471234 NEUROD1Q13562 356 aa13.25□□□□□ -0.29
TNPO3-203ENST00000471234 PHLDB1Q86UU1 1377 aa13.25□□□□□ -0.29
TNPO3-203ENST00000471234 TRIM52Q96A61 297 aa13.25□□□□□ -0.29
TNPO3-203ENST00000471234 PRG4Q92954 1404 aaPredicted RBP13.25□□□□□ -0.29
TNPO3-203ENST00000471234 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
TNPO3-203ENST00000471234 CASKIN1Q8WXD9 1431 aa13.23□□□□□ -0.29
TNPO3-203ENST00000471234 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
TNPO3-203ENST00000471234 PTPRGP23470 1445 aa13.23□□□□□ -0.29
TNPO3-203ENST00000471234 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
TNPO3-203ENST00000471234 LRRC9Q6ZRR7 1453 aa13.22□□□□□ -0.29
TNPO3-203ENST00000471234 CFDP1Q9UEE9 299 aaPredicted RBP13.21□□□□□ -0.29
TNPO3-203ENST00000471234 SAMD9Q5K651 1589 aa13.21□□□□□ -0.3
TNPO3-203ENST00000471234 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
TNPO3-203ENST00000471234 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
TNPO3-203ENST00000471234 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
TNPO3-203ENST00000471234 ZNF644Q9H582 1327 aaPredicted RBP13.18□□□□□ -0.3
TNPO3-203ENST00000471234 FYCO1Q9BQS8 1478 aa13.16□□□□□ -0.3
TNPO3-203ENST00000471234 TIAM1Q13009 1591 aa13.16□□□□□ -0.3
TNPO3-203ENST00000471234 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNPO3-203ENST00000471234 CEP170Q5SW79 1584 aa13.15□□□□□ -0.31
TNPO3-203ENST00000471234 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
TNPO3-203ENST00000471234 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
TNPO3-203ENST00000471234 DISP1Q96F81 1524 aa13.12□□□□□ -0.31
TNPO3-203ENST00000471234 NUP160Q12769 1436 aa13.11□□□□□ -0.31
TNPO3-203ENST00000471234 EPRSP07814 1512 aaKnown RBP13.11□□□□□ -0.31
TNPO3-203ENST00000471234 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
TNPO3-203ENST00000471234 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.311e-6■■■■□ 20.8
TNPO3-203ENST00000471234 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
TNPO3-203ENST00000471234 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
TNPO3-203ENST00000471234 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
TNPO3-203ENST00000471234 TSPY4P0CV99 314 aa13.07□□□□□ -0.32
TNPO3-203ENST00000471234 TSPY10P0CW01 314 aa13.07□□□□□ -0.32
TNPO3-203ENST00000471234 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
TNPO3-203ENST00000471234 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
TNPO3-203ENST00000471234 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
TNPO3-203ENST00000471234 CFAP43Q8NDM7 1665 aa13.06□□□□□ -0.32
TNPO3-203ENST00000471234 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
TNPO3-203ENST00000471234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■■■■ 28.5
TNPO3-203ENST00000471234 RRBP1Q9P2E9 1410 aaKnown RBP13.05□□□□□ -0.32
TNPO3-203ENST00000471234 FOXD1Q16676 465 aa13.05□□□□□ -0.32
TNPO3-203ENST00000471234 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
TNPO3-203ENST00000471234 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
TNPO3-203ENST00000471234 SETD5Q9C0A6 1442 aa13.03□□□□□ -0.32
TNPO3-203ENST00000471234 CHD1O14646 1710 aa13.02□□□□□ -0.32
TNPO3-203ENST00000471234 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.32
TNPO3-203ENST00000471234 HECW1Q76N89 1606 aa13.02□□□□□ -0.32
TNPO3-203ENST00000471234 UACAQ9BZF9 1416 aa13□□□□□ -0.33
TNPO3-203ENST00000471234 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
TNPO3-203ENST00000471234 MAGI3Q5TCQ9 1506 aa12.99□□□□□ -0.33
TNPO3-203ENST00000471234 ATP10BO94823 1461 aa12.98□□□□□ -0.33
TNPO3-203ENST00000471234 ZNF326Q5BKZ1 582 aaKnown RBP12.98□□□□□ -0.33
TNPO3-203ENST00000471234 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
TNPO3-203ENST00000471234 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
TNPO3-203ENST00000471234 TROQ12816 1431 aaPredicted RBP12.98□□□□□ -0.33
TNPO3-203ENST00000471234 DHX57Q6P158 1386 aaKnown RBP12.97□□□□□ -0.33
TNPO3-203ENST00000471234 RAPGEF6Q8TEU7 1601 aa12.97□□□□□ -0.33
TNPO3-203ENST00000471234 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
TNPO3-203ENST00000471234 ARHGEF11O15085 1522 aa12.95□□□□□ -0.34
TNPO3-203ENST00000471234 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
TNPO3-203ENST00000471234 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
TNPO3-203ENST00000471234 EFCAB2Q5VUJ9 269 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms