RNA–Protein interactions for RNA: ENST00000471220.5

CD53-203, Transcript of CD53 molecule, humanhuman

TSL 2

Gene CD53, Length 657 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-203ENST00000471220 MAGI1Q96QZ7 1491 aaPredicted RBP13.79□□□□□ -0.2
CD53-203ENST00000471220 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
CD53-203ENST00000471220 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
CD53-203ENST00000471220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
CD53-203ENST00000471220 CHD1O14646 1710 aa13.75□□□□□ -0.21
CD53-203ENST00000471220 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
CD53-203ENST00000471220 CUL7Q14999 1698 aa13.73□□□□□ -0.21
CD53-203ENST00000471220 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
CD53-203ENST00000471220 EEA1Q15075 1411 aa13.73□□□□□ -0.21
CD53-203ENST00000471220 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
CD53-203ENST00000471220 FBLN2P98095 1184 aa13.7□□□□□ -0.22
CD53-203ENST00000471220 CARMIL1Q5VZK9 1371 aa13.7□□□□□ -0.22
CD53-203ENST00000471220 CHMP7Q8WUX9 453 aaPredicted RBP13.69□□□□□ -0.22
CD53-203ENST00000471220 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
CD53-203ENST00000471220 GRIN2AQ12879 1464 aa13.68□□□□□ -0.22
CD53-203ENST00000471220 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
CD53-203ENST00000471220 RAPGEF2Q9Y4G8 1499 aa13.64□□□□□ -0.23
CD53-203ENST00000471220 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
CD53-203ENST00000471220 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
CD53-203ENST00000471220 NUP160Q12769 1436 aa13.61□□□□□ -0.23
CD53-203ENST00000471220 KIF21BO75037 1637 aa13.6□□□□□ -0.23
CD53-203ENST00000471220 CLASP1Q7Z460 1538 aa13.59□□□□□ -0.23
CD53-203ENST00000471220 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
CD53-203ENST00000471220 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
CD53-203ENST00000471220 CTTNBP2Q8WZ74 1663 aa13.52□□□□□ -0.25
CD53-203ENST00000471220 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
CD53-203ENST00000471220 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
CD53-203ENST00000471220 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
CD53-203ENST00000471220 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
CD53-203ENST00000471220 JPH4Q96JJ6 628 aa13.46□□□□□ -0.25
CD53-203ENST00000471220 ERCC6L2Q5T890 1561 aa13.45□□□□□ -0.26
CD53-203ENST00000471220 UBTFP17480 764 aaKnown RBP13.45□□□□□ -0.26
CD53-203ENST00000471220 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
CD53-203ENST00000471220 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
CD53-203ENST00000471220 PRG4Q92954 1404 aaPredicted RBP13.43□□□□□ -0.26
CD53-203ENST00000471220 UGGT2Q9NYU1 1516 aa13.43□□□□□ -0.26
CD53-203ENST00000471220 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
CD53-203ENST00000471220 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
CD53-203ENST00000471220 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
CD53-203ENST00000471220 DISP1Q96F81 1524 aa13.4□□□□□ -0.26
CD53-203ENST00000471220 KCNA4P22459 653 aa13.4□□□□□ -0.26
CD53-203ENST00000471220 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
CD53-203ENST00000471220 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
CD53-203ENST00000471220 KIAA0556O60303 1618 aa13.37□□□□□ -0.27
CD53-203ENST00000471220 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
CD53-203ENST00000471220 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
CD53-203ENST00000471220 CARMIL2Q6F5E8 1435 aa13.36□□□□□ -0.27
CD53-203ENST00000471220 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
CD53-203ENST00000471220 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
CD53-203ENST00000471220 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
CD53-203ENST00000471220 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
CD53-203ENST00000471220 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
CD53-203ENST00000471220 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
CD53-203ENST00000471220 PTPRGP23470 1445 aa13.29□□□□□ -0.28
CD53-203ENST00000471220 CLIP1P30622 1438 aa13.29□□□□□ -0.28
CD53-203ENST00000471220 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
CD53-203ENST00000471220 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
CD53-203ENST00000471220 CAPN15O75808 1086 aa13.27□□□□□ -0.29
CD53-203ENST00000471220 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
CD53-203ENST00000471220 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
CD53-203ENST00000471220 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
CD53-203ENST00000471220 ABCA8O94911 1581 aa13.21□□□□□ -0.29
CD53-203ENST00000471220 UACAQ9BZF9 1416 aa13.21□□□□□ -0.3
CD53-203ENST00000471220 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
CD53-203ENST00000471220 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
CD53-203ENST00000471220 RAPGEF6Q8TEU7 1601 aa13.18□□□□□ -0.3
CD53-203ENST00000471220 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
CD53-203ENST00000471220 PCF11O94913 1555 aaKnown RBP13.15□□□□□ -0.3
CD53-203ENST00000471220 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
CD53-203ENST00000471220 DSG3P32926 999 aa13.14□□□□□ -0.31
CD53-203ENST00000471220 NUP153P49790 1475 aaKnown RBP13.14□□□□□ -0.31
CD53-203ENST00000471220 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
CD53-203ENST00000471220 ZCCHC11Q5TAX3 1644 aaKnown RBP13.12□□□□□ -0.31
CD53-203ENST00000471220 CASKIN1Q8WXD9 1431 aa13.12□□□□□ -0.31
CD53-203ENST00000471220 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
CD53-203ENST00000471220 HECW1Q76N89 1606 aa13.11□□□□□ -0.31
CD53-203ENST00000471220 ARID3CA6NKF2 412 aa13.11□□□□□ -0.31
CD53-203ENST00000471220 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
CD53-203ENST00000471220 ATP10BO94823 1461 aa13.1□□□□□ -0.31
CD53-203ENST00000471220 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
CD53-203ENST00000471220 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
CD53-203ENST00000471220 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
CD53-203ENST00000471220 APLP2Q06481 763 aa13.08□□□□□ -0.32
CD53-203ENST00000471220 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
CD53-203ENST00000471220 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.32
CD53-203ENST00000471220 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
CD53-203ENST00000471220 ASXL2Q76L83 1435 aa13.05□□□□□ -0.32
CD53-203ENST00000471220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
CD53-203ENST00000471220 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
CD53-203ENST00000471220 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
CD53-203ENST00000471220 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
CD53-203ENST00000471220 WDR7Q9Y4E6 1490 aa13.01□□□□□ -0.33
CD53-203ENST00000471220 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
CD53-203ENST00000471220 MAGI3Q5TCQ9 1506 aa12.99□□□□□ -0.33
CD53-203ENST00000471220 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
CD53-203ENST00000471220 PLEKHD1A6NEE1 506 aa12.98□□□□□ -0.33
CD53-203ENST00000471220 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
CD53-203ENST00000471220 TIAM1Q13009 1591 aa12.98□□□□□ -0.33
CD53-203ENST00000471220 DIP2BQ9P265 1576 aa12.98□□□□□ -0.33
CD53-203ENST00000471220 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms