RNA–Protein interactions for RNA: ENST00000471220.5

CD53-203, Transcript of CD53 molecule, humanhuman

TSL 2

Gene CD53, Length 657 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-203ENST00000471220 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
CD53-203ENST00000471220 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
CD53-203ENST00000471220 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.73
CD53-203ENST00000471220 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
CD53-203ENST00000471220 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
CD53-203ENST00000471220 FOXD1Q16676 465 aa17.58■□□□□ 0.4
CD53-203ENST00000471220 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
CD53-203ENST00000471220 ABCC9O60706 1549 aa16.78■□□□□ 0.28
CD53-203ENST00000471220 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
CD53-203ENST00000471220 MSH5O43196 834 aa16.55■□□□□ 0.24
CD53-203ENST00000471220 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
CD53-203ENST00000471220 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
CD53-203ENST00000471220 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
CD53-203ENST00000471220 ADRA2BP18089 450 aa16.32■□□□□ 0.2
CD53-203ENST00000471220 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
CD53-203ENST00000471220 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
CD53-203ENST00000471220 NACADO15069 1562 aa16.26■□□□□ 0.19
CD53-203ENST00000471220 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
CD53-203ENST00000471220 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
CD53-203ENST00000471220 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
CD53-203ENST00000471220 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
CD53-203ENST00000471220 SCRIBQ14160 1630 aa15.87■□□□□ 0.13
CD53-203ENST00000471220 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
CD53-203ENST00000471220 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
CD53-203ENST00000471220 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
CD53-203ENST00000471220 EIF4G1Q04637 1599 aaKnown RBP15.31■□□□□ 0.04
CD53-203ENST00000471220 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
CD53-203ENST00000471220 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
CD53-203ENST00000471220 SMARCA4P51532 1647 aa15.21■□□□□ 0.02
CD53-203ENST00000471220 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
CD53-203ENST00000471220 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
CD53-203ENST00000471220 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
CD53-203ENST00000471220 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
CD53-203ENST00000471220 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
CD53-203ENST00000471220 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
CD53-203ENST00000471220 SMARCA2P51531 1590 aa15.02■□□□□ -0
CD53-203ENST00000471220 WIZO95785 1651 aa15.02□□□□□ -0.01
CD53-203ENST00000471220 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
CD53-203ENST00000471220 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
CD53-203ENST00000471220 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
CD53-203ENST00000471220 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
CD53-203ENST00000471220 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
CD53-203ENST00000471220 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
CD53-203ENST00000471220 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
CD53-203ENST00000471220 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
CD53-203ENST00000471220 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
CD53-203ENST00000471220 NESP48681 1621 aa14.61□□□□□ -0.07
CD53-203ENST00000471220 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
CD53-203ENST00000471220 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
CD53-203ENST00000471220 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
CD53-203ENST00000471220 CFTRP13569 1480 aa14.54□□□□□ -0.08
CD53-203ENST00000471220 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
CD53-203ENST00000471220 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
CD53-203ENST00000471220 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
CD53-203ENST00000471220 KIF21AQ7Z4S6 1674 aa14.44□□□□□ -0.1
CD53-203ENST00000471220 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
CD53-203ENST00000471220 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
CD53-203ENST00000471220 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
CD53-203ENST00000471220 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
CD53-203ENST00000471220 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
CD53-203ENST00000471220 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
CD53-203ENST00000471220 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
CD53-203ENST00000471220 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
CD53-203ENST00000471220 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
CD53-203ENST00000471220 WDR62O43379 1518 aa14.25□□□□□ -0.13
CD53-203ENST00000471220 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
CD53-203ENST00000471220 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
CD53-203ENST00000471220 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
CD53-203ENST00000471220 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
CD53-203ENST00000471220 CUX1P39880 1505 aa14.2□□□□□ -0.14
CD53-203ENST00000471220 CUX2O14529 1486 aa14.18□□□□□ -0.14
CD53-203ENST00000471220 WRNQ14191 1432 aaPredicted RBP eCLIP14.17□□□□□ -0.14
CD53-203ENST00000471220 SYNJ1O43426 1573 aa14.16□□□□□ -0.14
CD53-203ENST00000471220 TOP2BQ02880 1626 aa14.13□□□□□ -0.15
CD53-203ENST00000471220 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
CD53-203ENST00000471220 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
CD53-203ENST00000471220 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
CD53-203ENST00000471220 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
CD53-203ENST00000471220 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
CD53-203ENST00000471220 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
CD53-203ENST00000471220 SOGA1O94964 1423 aa14.05□□□□□ -0.16
CD53-203ENST00000471220 IFT140Q96RY7 1462 aa14.05□□□□□ -0.16
CD53-203ENST00000471220 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
CD53-203ENST00000471220 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
CD53-203ENST00000471220 WDR97A6NE52 1622 aa14□□□□□ -0.17
CD53-203ENST00000471220 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
CD53-203ENST00000471220 ABCA10Q8WWZ4 1543 aa13.98□□□□□ -0.17
CD53-203ENST00000471220 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.18
CD53-203ENST00000471220 EIF4G3O43432 1585 aaKnown RBP13.95□□□□□ -0.18
CD53-203ENST00000471220 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.185e-7■■■□□ 15.6
CD53-203ENST00000471220 ABCA5Q8WWZ7 1642 aa13.92□□□□□ -0.18
CD53-203ENST00000471220 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
CD53-203ENST00000471220 GAPVD1Q14C86 1478 aa13.88□□□□□ -0.19
CD53-203ENST00000471220 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
CD53-203ENST00000471220 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
CD53-203ENST00000471220 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
CD53-203ENST00000471220 RUSC2Q8N2Y8 1516 aa13.85□□□□□ -0.19
CD53-203ENST00000471220 SNAPC4Q5SXM2 1469 aa13.81□□□□□ -0.2
CD53-203ENST00000471220 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
CD53-203ENST00000471220 IGF1RP08069 1367 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms