RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 JPH4Q96JJ6 628 aa30.27■■■□□ 2.44
LMNA-212ENST00000470835 IGF1RP08069 1367 aa30.23■■■□□ 2.43
LMNA-212ENST00000470835 KIF13AQ9H1H9 1805 aa30.17■■■□□ 2.42
LMNA-212ENST00000470835 KIAA0586Q9BVV6 1533 aa30.17■■■□□ 2.42
LMNA-212ENST00000470835 ADCY10Q96PN6 1610 aa30.08■■■□□ 2.41
LMNA-212ENST00000470835 CARMIL1Q5VZK9 1371 aa30.05■■■□□ 2.4
LMNA-212ENST00000470835 MAPKBP1O60336 1514 aa30.01■■■□□ 2.39
LMNA-212ENST00000470835 IQGAP2Q13576 1575 aa29.96■■■□□ 2.39
LMNA-212ENST00000470835 NPM1P06748 294 aaKnown RBP eCLIP29.94■■■□□ 2.38
LMNA-212ENST00000470835 DIP2BQ9P265 1576 aa29.93■■■□□ 2.38
LMNA-212ENST00000470835 ABCC10Q5T3U5 1492 aa29.93■■■□□ 2.38
LMNA-212ENST00000470835 CARMIL2Q6F5E8 1435 aa29.87■■■□□ 2.37
LMNA-212ENST00000470835 PTPRGP23470 1445 aa29.85■■■□□ 2.37
LMNA-212ENST00000470835 FAM69CQ0P6D2 419 aa29.84■■■□□ 2.37
LMNA-212ENST00000470835 RAPGEF2Q9Y4G8 1499 aa29.82■■■□□ 2.36
LMNA-212ENST00000470835 TNIKQ9UKE5 1360 aa29.81■■■□□ 2.36
LMNA-212ENST00000470835 TTBK1Q5TCY1 1321 aaPredicted RBP29.79■■■□□ 2.36
LMNA-212ENST00000470835 TSPOAP1O95153 1857 aa29.78■■■□□ 2.36
LMNA-212ENST00000470835 DISP1Q96F81 1524 aa29.76■■■□□ 2.36
LMNA-212ENST00000470835 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
LMNA-212ENST00000470835 CTTNBP2Q8WZ74 1663 aa29.74■■■□□ 2.35
LMNA-212ENST00000470835 ABCC2Q92887 1545 aa29.74■■■□□ 2.35
LMNA-212ENST00000470835 UGGT2Q9NYU1 1516 aa29.73■■■□□ 2.35
LMNA-212ENST00000470835 KIAA0556O60303 1618 aa29.7■■■□□ 2.34
LMNA-212ENST00000470835 UHRF1BP1LA0JNW5 1464 aa29.68■■■□□ 2.34
LMNA-212ENST00000470835 KDM6BO15054 1643 aa29.67■■■□□ 2.34
LMNA-212ENST00000470835 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
LMNA-212ENST00000470835 ASXL2Q76L83 1435 aa29.62■■■□□ 2.33
LMNA-212ENST00000470835 PLB1Q6P1J6 1458 aa29.6■■■□□ 2.33
LMNA-212ENST00000470835 ZCCHC11Q5TAX3 1644 aaKnown RBP29.57■■■□□ 2.32
LMNA-212ENST00000470835 GLI2P10070 1586 aa29.56■■■□□ 2.32
LMNA-212ENST00000470835 KDM5BQ9UGL1 1544 aa29.55■■■□□ 2.32
LMNA-212ENST00000470835 PPRC1Q5VV67 1664 aaKnown RBP29.55■■■□□ 2.32
LMNA-212ENST00000470835 PRXQ9BXM0 1461 aa29.53■■■□□ 2.32
LMNA-212ENST00000470835 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
LMNA-212ENST00000470835 MAP3K4Q9Y6R4 1608 aa29.46■■■□□ 2.31
LMNA-212ENST00000470835 EPRSP07814 1512 aaKnown RBP29.45■■■□□ 2.3
LMNA-212ENST00000470835 ABCA8O94911 1581 aa29.39■■■□□ 2.3
LMNA-212ENST00000470835 WDR7Q9Y4E6 1490 aa29.36■■■□□ 2.29
LMNA-212ENST00000470835 TEX14Q8IWB6 1497 aa29.31■■■□□ 2.28
LMNA-212ENST00000470835 CFAP43Q8NDM7 1665 aa29.26■■■□□ 2.27
LMNA-212ENST00000470835 SAMD9Q5K651 1589 aa29.24■■■□□ 2.27
LMNA-212ENST00000470835 CSRNP3Q8WYN3 585 aa29.23■■■□□ 2.27
LMNA-212ENST00000470835 COL17A1Q9UMD9 1497 aaPredicted RBP29.23■■■□□ 2.27
LMNA-212ENST00000470835 KDM4FA0A1W2PPD8 638 aa29.2■■■□□ 2.26
LMNA-212ENST00000470835 EEA1Q15075 1411 aa29.2■■■□□ 2.26
LMNA-212ENST00000470835 P3H3Q8IVL6 736 aa29.16■■■□□ 2.26
LMNA-212ENST00000470835 MAGI3Q5TCQ9 1506 aa29.14■■■□□ 2.25
LMNA-212ENST00000470835 CD109Q6YHK3 1445 aa29.13■■■□□ 2.25
LMNA-212ENST00000470835 RAPGEF6Q8TEU7 1601 aa29.12■■■□□ 2.25
LMNA-212ENST00000470835 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
LMNA-212ENST00000470835 KCNH8Q96L42 1107 aa29.12■■■□□ 2.25
LMNA-212ENST00000470835 ATP10BO94823 1461 aa29.09■■■□□ 2.25
LMNA-212ENST00000470835 ADGRL1O94910 1474 aa29.09■■■□□ 2.25
LMNA-212ENST00000470835 ARID3CA6NKF2 412 aa29.08■■■□□ 2.25
LMNA-212ENST00000470835 KIF21BO75037 1637 aa29.05■■■□□ 2.24
LMNA-212ENST00000470835 ABCA9Q8IUA7 1624 aa29.02■■■□□ 2.24
LMNA-212ENST00000470835 FHOD3Q2V2M9 1422 aa28.98■■■□□ 2.23
LMNA-212ENST00000470835 RANGAP1P46060 587 aaPredicted RBP28.98■■■□□ 2.23
LMNA-212ENST00000470835 NUP153P49790 1475 aaKnown RBP28.96■■■□□ 2.23
LMNA-212ENST00000470835 EFCAB5A4FU69 1503 aa28.94■■■□□ 2.22
LMNA-212ENST00000470835 ARAP3Q8WWN8 1544 aa28.91■■■□□ 2.22
LMNA-212ENST00000470835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.88■■■□□ 2.21
LMNA-212ENST00000470835 HNRNPUL2Q1KMD3 747 aaKnown RBP28.88■■■□□ 2.21
LMNA-212ENST00000470835 NEO1Q92859 1461 aa28.8■■■□□ 2.2
LMNA-212ENST00000470835 PHLDB1Q86UU1 1377 aa28.8■■■□□ 2.2
LMNA-212ENST00000470835 FRMPD1Q5SYB0 1578 aa28.75■■■□□ 2.19
LMNA-212ENST00000470835 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
LMNA-212ENST00000470835 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
LMNA-212ENST00000470835 TTC37Q6PGP7 1564 aa28.71■■■□□ 2.19
LMNA-212ENST00000470835 CFAP74Q9C0B2 1584 aa28.71■■■□□ 2.19
LMNA-212ENST00000470835 CDK13Q14004 1512 aaKnown RBP28.71■■■□□ 2.19
LMNA-212ENST00000470835 PLEKHD1A6NEE1 506 aa28.71■■■□□ 2.19
LMNA-212ENST00000470835 HECW2Q9P2P5 1572 aa28.71■■■□□ 2.19
LMNA-212ENST00000470835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.7■■■□□ 2.19
LMNA-212ENST00000470835 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
LMNA-212ENST00000470835 RAPGEF3O95398 923 aa28.68■■■□□ 2.18
LMNA-212ENST00000470835 RICTORQ6R327 1708 aa28.67■■■□□ 2.18
LMNA-212ENST00000470835 HECW1Q76N89 1606 aa28.67■■■□□ 2.18
LMNA-212ENST00000470835 ARHGAP35Q9NRY4 1499 aa28.64■■■□□ 2.17
LMNA-212ENST00000470835 FMN1Q68DA7 1419 aa28.63■■■□□ 2.17
LMNA-212ENST00000470835 FANCAO15360 1455 aa28.63■■■□□ 2.17
LMNA-212ENST00000470835 ADAMTSL3P82987 1691 aa28.61■■■□□ 2.17
LMNA-212ENST00000470835 ARHGEF40Q8TER5 1519 aa28.61■■■□□ 2.17
LMNA-212ENST00000470835 DENND4BO75064 1496 aaPredicted RBP28.59■■■□□ 2.17
LMNA-212ENST00000470835 AKNAQ7Z591 1439 aa28.59■■■□□ 2.17
LMNA-212ENST00000470835 BCORL1Q5H9F3 1711 aa28.58■■■□□ 2.17
LMNA-212ENST00000470835 LRRIQ1Q96JM4 1722 aa28.55■■■□□ 2.16
LMNA-212ENST00000470835 MYO5CQ9NQX4 1742 aa28.55■■■□□ 2.16
LMNA-212ENST00000470835 ATP1B4Q9UN42 357 aaPredicted RBP28.52■■■□□ 2.16
LMNA-212ENST00000470835 ZMYM4Q5VZL5 1548 aa28.52■■■□□ 2.16
LMNA-212ENST00000470835 MADDQ8WXG6 1647 aa28.51■■■□□ 2.15
LMNA-212ENST00000470835 PTPRMP28827 1452 aa28.49■■■□□ 2.15
LMNA-212ENST00000470835 KIF14Q15058 1648 aa28.49■■■□□ 2.15
LMNA-212ENST00000470835 PLCH2O75038 1416 aa28.46■■■□□ 2.15
LMNA-212ENST00000470835 ZFYVE16Q7Z3T8 1539 aa28.46■■■□□ 2.15
LMNA-212ENST00000470835 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.15
LMNA-212ENST00000470835 RIMS1Q86UR5 1692 aaKnown RBP28.43■■■□□ 2.14
LMNA-212ENST00000470835 SIGLEC1Q9BZZ2 1709 aa28.43■■■□□ 2.14
LMNA-212ENST00000470835 PCF11O94913 1555 aaKnown RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms