RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 ADAMTS12P58397 1594 aa12.48□□□□□ -0.41
SF3A3-205ENST00000470585 FHAD1B1AJZ9 1412 aa12.48□□□□□ -0.41
SF3A3-205ENST00000470585 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
SF3A3-205ENST00000470585 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
SF3A3-205ENST00000470585 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
SF3A3-205ENST00000470585 TOP2BQ02880 1626 aa12.41□□□□□ -0.42
SF3A3-205ENST00000470585 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
SF3A3-205ENST00000470585 MAPKBP1O60336 1514 aa12.4□□□□□ -0.42
SF3A3-205ENST00000470585 ABCC10Q5T3U5 1492 aa12.39□□□□□ -0.43
SF3A3-205ENST00000470585 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
SF3A3-205ENST00000470585 JPH4Q96JJ6 628 aa12.34□□□□□ -0.43
SF3A3-205ENST00000470585 DIP2BQ9P265 1576 aa12.32□□□□□ -0.44
SF3A3-205ENST00000470585 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
SF3A3-205ENST00000470585 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
SF3A3-205ENST00000470585 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
SF3A3-205ENST00000470585 KIAA0586Q9BVV6 1533 aa12.27□□□□□ -0.44
SF3A3-205ENST00000470585 KDM6BO15054 1643 aa12.26□□□□□ -0.45
SF3A3-205ENST00000470585 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
SF3A3-205ENST00000470585 CUL7Q14999 1698 aa12.22□□□□□ -0.45
SF3A3-205ENST00000470585 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
SF3A3-205ENST00000470585 GLI2P10070 1586 aa12.19□□□□□ -0.46
SF3A3-205ENST00000470585 PLB1Q6P1J6 1458 aa12.18□□□□□ -0.46
SF3A3-205ENST00000470585 ABCC2Q92887 1545 aa12.17□□□□□ -0.46
SF3A3-205ENST00000470585 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
SF3A3-205ENST00000470585 PTPRGP23470 1445 aa12.16□□□□□ -0.46
SF3A3-205ENST00000470585 CARMIL2Q6F5E8 1435 aa12.16□□□□□ -0.46
SF3A3-205ENST00000470585 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
SF3A3-205ENST00000470585 IGF1RP08069 1367 aa12.16□□□□□ -0.46
SF3A3-205ENST00000470585 TNIKQ9UKE5 1360 aa12.15□□□□□ -0.46
SF3A3-205ENST00000470585 TSPOAP1O95153 1857 aa12.13□□□□□ -0.47
SF3A3-205ENST00000470585 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
SF3A3-205ENST00000470585 TEX14Q8IWB6 1497 aa12.11□□□□□ -0.47
SF3A3-205ENST00000470585 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
SF3A3-205ENST00000470585 PPRC1Q5VV67 1664 aaKnown RBP12.1□□□□□ -0.47
SF3A3-205ENST00000470585 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
SF3A3-205ENST00000470585 ADGRL1O94910 1474 aa12.08□□□□□ -0.47
SF3A3-205ENST00000470585 KDM5BQ9UGL1 1544 aa12.08□□□□□ -0.48
SF3A3-205ENST00000470585 UACAQ9BZF9 1416 aa12.08□□□□□ -0.48
SF3A3-205ENST00000470585 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
SF3A3-205ENST00000470585 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
SF3A3-205ENST00000470585 MAP3K4Q9Y6R4 1608 aa12.07□□□□□ -0.48
SF3A3-205ENST00000470585 EPRSP07814 1512 aaKnown RBP12.05□□□□□ -0.48
SF3A3-205ENST00000470585 UGGT2Q9NYU1 1516 aa12.02□□□□□ -0.48
SF3A3-205ENST00000470585 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
SF3A3-205ENST00000470585 HECW2Q9P2P5 1572 aa12.01□□□□□ -0.49
SF3A3-205ENST00000470585 COL17A1Q9UMD9 1497 aaPredicted RBP12□□□□□ -0.49
SF3A3-205ENST00000470585 MAGI3Q5TCQ9 1506 aa11.99□□□□□ -0.49
SF3A3-205ENST00000470585 WDR7Q9Y4E6 1490 aa11.98□□□□□ -0.49
SF3A3-205ENST00000470585 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
SF3A3-205ENST00000470585 KIAA0556O60303 1618 aa11.96□□□□□ -0.5
SF3A3-205ENST00000470585 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
SF3A3-205ENST00000470585 CFAP43Q8NDM7 1665 aa11.95□□□□□ -0.5
SF3A3-205ENST00000470585 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
SF3A3-205ENST00000470585 PHLDB1Q86UU1 1377 aa11.93□□□□□ -0.5
SF3A3-205ENST00000470585 CD109Q6YHK3 1445 aa11.92□□□□□ -0.5
SF3A3-205ENST00000470585 ARAP3Q8WWN8 1544 aa11.91□□□□□ -0.5
SF3A3-205ENST00000470585 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
SF3A3-205ENST00000470585 ABCA8O94911 1581 aa11.88□□□□□ -0.51
SF3A3-205ENST00000470585 FBXO41Q8TF61 875 aa11.88□□□□□ -0.51
SF3A3-205ENST00000470585 CTTNBP2Q8WZ74 1663 aa11.85□□□□□ -0.51
SF3A3-205ENST00000470585 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
SF3A3-205ENST00000470585 ADAMTSL3P82987 1691 aa11.81□□□□□ -0.52
SF3A3-205ENST00000470585 NEO1Q92859 1461 aa11.81□□□□□ -0.52
SF3A3-205ENST00000470585 KIF21BO75037 1637 aa11.8□□□□□ -0.52
SF3A3-205ENST00000470585 ABCA9Q8IUA7 1624 aa11.8□□□□□ -0.52
SF3A3-205ENST00000470585 PTPRMP28827 1452 aa11.8□□□□□ -0.52
SF3A3-205ENST00000470585 PRXQ9BXM0 1461 aa11.77□□□□□ -0.52
SF3A3-205ENST00000470585 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
SF3A3-205ENST00000470585 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
SF3A3-205ENST00000470585 ATP10BO94823 1461 aa11.75□□□□□ -0.53
SF3A3-205ENST00000470585 BCORL1Q5H9F3 1711 aa11.74□□□□□ -0.53
SF3A3-205ENST00000470585 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
SF3A3-205ENST00000470585 ARHGEF40Q8TER5 1519 aa11.71□□□□□ -0.53
SF3A3-205ENST00000470585 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
SF3A3-205ENST00000470585 FRMPD1Q5SYB0 1578 aa11.7□□□□□ -0.54
SF3A3-205ENST00000470585 CFAP74Q9C0B2 1584 aa11.7□□□□□ -0.54
SF3A3-205ENST00000470585 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
SF3A3-205ENST00000470585 SAMD9Q5K651 1589 aa11.69□□□□□ -0.54
SF3A3-205ENST00000470585 MAGI2Q86UL8 1455 aa11.69□□□□□ -0.54
SF3A3-205ENST00000470585 FHOD3Q2V2M9 1422 aa11.69□□□□□ -0.54
SF3A3-205ENST00000470585 RAPGEF6Q8TEU7 1601 aa11.68□□□□□ -0.54
SF3A3-205ENST00000470585 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
SF3A3-205ENST00000470585 ZMYM4Q5VZL5 1548 aa11.68□□□□□ -0.54
SF3A3-205ENST00000470585 DENND4BO75064 1496 aaPredicted RBP11.67□□□□□ -0.54
SF3A3-205ENST00000470585 FANCAO15360 1455 aa11.66□□□□□ -0.54
SF3A3-205ENST00000470585 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
SF3A3-205ENST00000470585 AKNAQ7Z591 1439 aa11.66□□□□□ -0.54
SF3A3-205ENST00000470585 RICTORQ6R327 1708 aa11.65□□□□□ -0.54
SF3A3-205ENST00000470585 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.55
SF3A3-205ENST00000470585 ARID4BQ4LE39 1312 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-205ENST00000470585 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
SF3A3-205ENST00000470585 RIMS1Q86UR5 1692 aaKnown RBP11.62□□□□□ -0.55
SF3A3-205ENST00000470585 TTC37Q6PGP7 1564 aa11.61□□□□□ -0.55
SF3A3-205ENST00000470585 ZFYVE16Q7Z3T8 1539 aa11.6□□□□□ -0.55
SF3A3-205ENST00000470585 PLEKHD1A6NEE1 506 aa11.6□□□□□ -0.55
SF3A3-205ENST00000470585 EEA1Q15075 1411 aa11.6□□□□□ -0.55
SF3A3-205ENST00000470585 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
SF3A3-205ENST00000470585 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
SF3A3-205ENST00000470585 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
SF3A3-205ENST00000470585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms