RNA–Protein interactions for RNA: ENST00000470322.5

ACTR1A-202, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 2

Gene ACTR1A, Length 3,519 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-202ENST00000470322 FKBP8Q14318 412 aa13.27□□□□□ -0.29
ACTR1A-202ENST00000470322 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
ACTR1A-202ENST00000470322 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
ACTR1A-202ENST00000470322 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
ACTR1A-202ENST00000470322 IRX6P78412 446 aaPredicted RBP13.24□□□□□ -0.29
ACTR1A-202ENST00000470322 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
ACTR1A-202ENST00000470322 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
ACTR1A-202ENST00000470322 FOXD1Q16676 465 aa13.22□□□□□ -0.29
ACTR1A-202ENST00000470322 IGF1RP08069 1367 aa13.22□□□□□ -0.29
ACTR1A-202ENST00000470322 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.3
ACTR1A-202ENST00000470322 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
ACTR1A-202ENST00000470322 CUX1P39880 1505 aa13.17□□□□□ -0.3
ACTR1A-202ENST00000470322 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
ACTR1A-202ENST00000470322 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
ACTR1A-202ENST00000470322 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
ACTR1A-202ENST00000470322 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
ACTR1A-202ENST00000470322 PHLDB1Q86UU1 1377 aa13.13□□□□□ -0.31
ACTR1A-202ENST00000470322 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
ACTR1A-202ENST00000470322 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
ACTR1A-202ENST00000470322 PRXQ9BXM0 1461 aa13.13□□□□□ -0.31
ACTR1A-202ENST00000470322 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
ACTR1A-202ENST00000470322 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
ACTR1A-202ENST00000470322 NESP48681 1621 aa13.12□□□□□ -0.31
ACTR1A-202ENST00000470322 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
ACTR1A-202ENST00000470322 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
ACTR1A-202ENST00000470322 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
ACTR1A-202ENST00000470322 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
ACTR1A-202ENST00000470322 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
ACTR1A-202ENST00000470322 CFTRP13569 1480 aa13.08□□□□□ -0.32
ACTR1A-202ENST00000470322 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
ACTR1A-202ENST00000470322 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
ACTR1A-202ENST00000470322 ERICH6Q7L0X2 663 aa13.05□□□□□ -0.32
ACTR1A-202ENST00000470322 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
ACTR1A-202ENST00000470322 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
ACTR1A-202ENST00000470322 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
ACTR1A-202ENST00000470322 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
ACTR1A-202ENST00000470322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
ACTR1A-202ENST00000470322 MRS2Q9HD23 443 aa13□□□□□ -0.33
ACTR1A-202ENST00000470322 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.335e-12■□□□□ 11.1
ACTR1A-202ENST00000470322 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
ACTR1A-202ENST00000470322 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
ACTR1A-202ENST00000470322 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
ACTR1A-202ENST00000470322 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
ACTR1A-202ENST00000470322 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
ACTR1A-202ENST00000470322 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.33
ACTR1A-202ENST00000470322 RGL3Q3MIN7 710 aa12.96□□□□□ -0.34
ACTR1A-202ENST00000470322 CFDP1Q9UEE9 299 aaPredicted RBP12.96□□□□□ -0.34
ACTR1A-202ENST00000470322 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
ACTR1A-202ENST00000470322 MPHOSPH9Q99550 1183 aa12.93□□□□□ -0.34
ACTR1A-202ENST00000470322 SENP3Q9H4L4 574 aaPredicted RBP12.93□□□□□ -0.34
ACTR1A-202ENST00000470322 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
ACTR1A-202ENST00000470322 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
ACTR1A-202ENST00000470322 FMN1Q68DA7 1419 aa12.91□□□□□ -0.34
ACTR1A-202ENST00000470322 HMGXB3Q12766 1538 aa12.9□□□□□ -0.34
ACTR1A-202ENST00000470322 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
ACTR1A-202ENST00000470322 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
ACTR1A-202ENST00000470322 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
ACTR1A-202ENST00000470322 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
ACTR1A-202ENST00000470322 TSPY4P0CV99 314 aa12.86□□□□□ -0.35
ACTR1A-202ENST00000470322 TSPY10P0CW01 314 aa12.86□□□□□ -0.35
ACTR1A-202ENST00000470322 FGD6Q6ZV73 1430 aa12.86□□□□□ -0.35
ACTR1A-202ENST00000470322 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
ACTR1A-202ENST00000470322 CCDC18Q5T9S5 1454 aa12.86□□□□□ -0.35
ACTR1A-202ENST00000470322 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
ACTR1A-202ENST00000470322 TIAM1Q13009 1591 aa12.85□□□□□ -0.35
ACTR1A-202ENST00000470322 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
ACTR1A-202ENST00000470322 B4GALNT3Q6L9W6 998 aa12.84□□□□□ -0.35
ACTR1A-202ENST00000470322 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
ACTR1A-202ENST00000470322 PKD2Q13563 968 aa12.83□□□□□ -0.36
ACTR1A-202ENST00000470322 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
ACTR1A-202ENST00000470322 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
ACTR1A-202ENST00000470322 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
ACTR1A-202ENST00000470322 PCF11O94913 1555 aaKnown RBP12.8□□□□□ -0.36
ACTR1A-202ENST00000470322 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
ACTR1A-202ENST00000470322 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
ACTR1A-202ENST00000470322 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
ACTR1A-202ENST00000470322 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
ACTR1A-202ENST00000470322 NCOA2Q15596 1464 aa12.79□□□□□ -0.36
ACTR1A-202ENST00000470322 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
ACTR1A-202ENST00000470322 ANP32EQ9BTT0 268 aa12.78□□□□□ -0.36
ACTR1A-202ENST00000470322 CCER2I3L3R5 266 aa12.78□□□□□ -0.36
ACTR1A-202ENST00000470322 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
ACTR1A-202ENST00000470322 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.36
ACTR1A-202ENST00000470322 PTPRKQ15262 1439 aa12.77□□□□□ -0.37
ACTR1A-202ENST00000470322 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
ACTR1A-202ENST00000470322 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
ACTR1A-202ENST00000470322 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
ACTR1A-202ENST00000470322 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
ACTR1A-202ENST00000470322 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
ACTR1A-202ENST00000470322 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
ACTR1A-202ENST00000470322 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
ACTR1A-202ENST00000470322 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
ACTR1A-202ENST00000470322 CC2D1BQ5T0F9 858 aaKnown RBP12.72□□□□□ -0.37
ACTR1A-202ENST00000470322 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
ACTR1A-202ENST00000470322 FYCO1Q9BQS8 1478 aa12.72□□□□□ -0.37
ACTR1A-202ENST00000470322 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
ACTR1A-202ENST00000470322 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.37
ACTR1A-202ENST00000470322 NUP155O75694 1391 aa12.71□□□□□ -0.37
ACTR1A-202ENST00000470322 NAIPQ13075 1403 aa12.7□□□□□ -0.38
ACTR1A-202ENST00000470322 ABCA10Q8WWZ4 1543 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms